Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2558 ATGGTAGTTCACTACAGAGCATGGACAGAGACCACACAGCACAAGTTTGAAGACACATGGGATGAGCAACGACCCATTGAAATGATATTAGGAAAAGAAAAGAAAGAGATGACCGGCTTGGCTATTGGTGTGGCCAGCATGAAAGCTGGAGAGCGTGCCTTACTGCGTGTGGGCTGGGAATTAGGATATGGAAAGGAAGGCAGCTTTTCTTTTCCAAATGTTCCACCTATGGCAGATTTAGTTTATGAAGTTGAGCTCAGAGGCTTTGATGAAACAAAAGAAGGGAAACCTCGTAGTGATATGACCGTTGAGGAAAGGATTGGTGTGGCAGACCGAAGAAAAATGGATGGAAATGCTTTGTTTAAAGAGGACAAACTGGAGGAGGCTATGCAACAGTACGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTTCAGTTGTTTGGGAAGTATAGGGATATGGCTTTGGCTGTAAAGAATCCTTGCCACCTTAACATGGCTGCATGTTTGATTAAGCTGAACCGTTTCGATGAGGCCATAGGACAATGTAGCCTTGTGTTGAGTGAGGATGAAAACAATGTGAAGGCATTATTTAGACGCGGTAAGGCTAGGGCAGCACTTGGCCAAACAGATGCTGCCAGGGAGGATTTTCTGAAAGCAAAAAAGCATGCCCCAGAGGATAAAGCAATTGCAAAAGAATTGAGATTGCTTGCCGAACATGACAAGGCTCTTTATCAAAAGCAAAAAGAGATATATAAAGGAATGTTTGGACCAAGGCCTGATCCAAAACCTGGGCGAAGGAATTTTCTGATTCTTATTTGGCAGTGGTTGCTGGCAGCACTCCATCGCCTCATTACTATCTTCAAGCGTGAAAGGCAAAAATCTGACTAA 894 0.4374 MVVHYRAWTETTQHKFEDTWDEQRPIEMILGKEKKEMTGLAIGVASMKAGERALLRVGWELGYGKEGSFSFPNVPPMADLVYEVELRGFDETKEGKPRSDMTVEERIGVADRRKMDGNALFKEDKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRFDEAIGQCSLVLSEDENNVKALFRRGKARAALGQTDAAREDFLKAKKHAPEDKAIAKELRLLAEHDKALYQKQKEIYKGMFGPRPDPKPGRRNFLILIWQWLLAALHRLITIFKRERQKSD 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2558 297 Gene3D - 1 91 IPR046357 GO:0003755
Prci6g2558 297 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 90 IPR001179 GO:0003755
Prci6g2558 297 ProSiteProfiles TPR repeat profile. 195 228 IPR019734 GO:0005515
Prci6g2558 297 SUPERFAMILY FKBP-like 2 94 - -
Prci6g2558 297 Pfam Tetratricopeptide repeat 196 226 IPR019734 GO:0005515
Prci6g2558 297 SUPERFAMILY TPR-like 102 256 IPR011990 GO:0005515
Prci6g2558 297 SMART tpr_5 110 143 IPR019734 GO:0005515
Prci6g2558 297 SMART tpr_5 161 194 IPR019734 GO:0005515
Prci6g2558 297 SMART tpr_5 195 228 IPR019734 GO:0005515
Prci6g2558 297 FunFam Peptidylprolyl isomerase 95 223 - -
Prci6g2558 297 Gene3D Tetratricopeptide repeat domain 92 223 IPR011990 GO:0005515
Prci6g2558 297 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 25 264 IPR039663 -
Prci6g2558 297 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 2 86 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2558 Prci-Chr6 37340082 37343727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2558 3 94 Calmodulin-binding Proteins AT3G25230 35.870 5.28e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2558 - - gmx:100790587 525.013