Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2556 ATGGAGGAAGTTCAGGAGCCTCAAACTCAACCACTAGGTGAAGAAGATCAGAATGAAATAATTACTGAAAGTTCTGCATTTGTTAAAGGGGAACCTCCACAAGAAGTGAGTAATCCCCCTAAAGTTGACTCAGAGGTTGAAGTCCTTCATGAAAATGTTACAAAACAAATAATTAAGGAAGGTCATGGTCAAAAGCCTACCAAATATTCAACATGTTTTTTTCACTACAGAGCATGGACAGAGACCACACAGCACAAGTTTGAAGACACATGGGATGAGCAACGACCCATTGAAATGATATTAGGAAAAGAAAAGAAAGAGATGACCGGCTTGGCTATTGGTGTGGCCAGCATGAAAGCTGGAGAGCGTGCCTTACTGCGTGTGGGCTGGGAATTAGGATATGGAAAGGAAGGCAGCTTTTCTTTTCCAAATGTTCCACCTATGGCAGATTTAGTTTATGAAGTTGAGCTCAGAGGCTTTGATGAAACAAAAGAAGGGAAACCTCGTAGTGATATGACCGTTGAGGAAAGGATTGGTGTGGCAGACCGAAGAAAAATGGATGGAAATGCTTTGTTTAAAGAGGACAAACTGGAGGAGGCTATGCAACAGTACGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTTCAGTTGTTTGGGAAGTATAGGGATATGGCTTTGGCTGTAAAGAATCCTTGCCACCTTAACATGGCTGCATGTTTGATTAAGCTGAACCGTTTCGATGAGGCCATAGGACAATGTAGCCTTGTGTTGAGTGAGGATGAAAACAATGTGAAGGCATTATTTAGACGCGGTAAGGCTAGGGCAGCACTTGGCCAAACAGATGCTGCCAGGGAGGATTTTCTGAAAGCAAAAAAGCATGCCCCAGAGGATAAAGCAATTGCAAAAGAATTGAGATTGCTTGCCGAACATGACAAGGCTCTTTATCAAAAGCAAAAAGAGATATATAAAGGAATGTTTGGACCAAGGCCTGATCCAAAACCTGGGCGAAGGAATTTTCTGATTCTTATTTGGCAGTGGTTGCTGGCAGCACTCCATCGCCTCATTACTATCTTCAAGCGTGAAAGGCAAAAATCTGACTAA 1107 0.4246 MEEVQEPQTQPLGEEDQNEIITESSAFVKGEPPQEVSNPPKVDSEVEVLHENVTKQIIKEGHGQKPTKYSTCFFHYRAWTETTQHKFEDTWDEQRPIEMILGKEKKEMTGLAIGVASMKAGERALLRVGWELGYGKEGSFSFPNVPPMADLVYEVELRGFDETKEGKPRSDMTVEERIGVADRRKMDGNALFKEDKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRFDEAIGQCSLVLSEDENNVKALFRRGKARAALGQTDAAREDFLKAKKHAPEDKAIAKELRLLAEHDKALYQKQKEIYKGMFGPRPDPKPGRRNFLILIWQWLLAALHRLITIFKRERQKSD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2556 368 SUPERFAMILY FKBP-like 31 160 - -
Prci6g2556 368 ProSiteProfiles TPR repeat profile. 266 299 IPR019734 GO:0005515
Prci6g2556 368 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 69 161 IPR001179 GO:0003755
Prci6g2556 368 MobiDBLite consensus disorder prediction 1 43 - -
Prci6g2556 368 FunFam Peptidylprolyl isomerase 166 294 - -
Prci6g2556 368 SUPERFAMILY TPR-like 173 327 IPR011990 GO:0005515
Prci6g2556 368 Gene3D Tetratricopeptide repeat domain 163 294 IPR011990 GO:0005515
Prci6g2556 368 MobiDBLite consensus disorder prediction 10 24 - -
Prci6g2556 368 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 65 157 IPR001179 GO:0003755
Prci6g2556 368 SMART tpr_5 266 299 IPR019734 GO:0005515
Prci6g2556 368 SMART tpr_5 181 214 IPR019734 GO:0005515
Prci6g2556 368 SMART tpr_5 232 265 IPR019734 GO:0005515
Prci6g2556 368 Gene3D - 37 162 IPR046357 GO:0003755
Prci6g2556 368 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 96 335 IPR039663 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2556 Prci-Chr6 37340082 37344867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2556 46 339 Calmodulin-binding Proteins AT5G48570 31.894 3.52e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2556 - - gmx:100790587 643.269