Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2554 ATGAAGAGGTTGAGGTCTAGCGAGGATCTCCATTCGTACGCAGACAAAAATGGCTGCAAGGATTCGAATCTGAATCGATCCTCGTCCTCTTCACACCGAAGCTTTTACTACAAACCTGAGAATGTACGGAAGGGATTACTTTCCTCATCGTCTTCGGCGTCTCGGTATGACAGGGATCGAACGATGGATGAGGATCGGGAAGGCTCCCGGTTGGTCCGGAAGCGATCAGACCATGATTTTGATAGTTTTGATCGGAGAAAGGGGTTTGATCGTTACAGGGACTCTGGAGATAGTAGAGGATACGGAGCTGGAGGGGATAGGGGTTTGATTCGGTCGGAGAGTTTTTGTGGCTCTAGGAGGGATTTTCCGAAGGGCTTTCGGTCGGAGAGAGACCGGTCCAGGCGGGAAGGCAGCGTGTCTTCGTGGCGGAGATTTGGTGGTGGATTAAAGGATTTTGATGACAGTGGCAGGGGTAGCAGGGTCGGACTGGAAGATAGAGTAGTGCGGTCTCCGAAGAGTTTGAGGGATGTAAAATCCCCGACACGGTCCAGAGATTCAGAGAGTGATCAGTCTAAGATGAGGTCTCCTCCGAGAGGGTCAAGAGATGCAAAGTCGAAGTCGAAGTCTCCATCTTGGTCCAAGGATTCAGAGAGTGAACAGTCGAGGAGTGAGCAATCGAAGAGTGTTGAGGTGAAGAAAACTGAGGAATTGCAGGTTGAGAGCCGGAGTAGTAGTGAAATGGAAGAAGGAGAACTGGAGCCAGAACCCATGCCTGAAACAGAACCACAAAAGGCTTCGAATGCTGCACCTAAGGATGAAGACCAGACCTCTATTCCTTTGAACGCTGCTGAGAAGGAGATCCAGACTGAAAACCAGCTCAATGAGACAGATACTACCATGCATGAAATACCGGAGGAGCTAAATAAAGAAGAGGCAAAACCAGAAGAGGATACCAATCCAGCTGAACAGAATGTGGAGAAAGATGAAATACCGGAGGAGTTGCCAGATCTTCAGAGTGATCCAACTGTTAAAGTGCATGACACTGAAAATGAAATTGAAACTTCTGTTCATAATGATAACAAGGAAGAAGACGGTTTGAAAGTCGAAACCTCATGTAAGGGGGAAACAAAGGAAGGTGGCGAGCAGGAGAAGCCATTGCTTTATGAAGAGAAGCATAAGCAGGACAAGGGTAGAGATCTTGAAACCAGCGCAGACTCTGACAAACCAGAGCTACGGAAGGAAGTTTCAACAAAAAATGAAATGCTTAAAGCAGATGGGAAAATGACGGAGACTGTGACCAACAATGTGAAGGATAAAGGCAAAAGTGTCTCTGTTGCCCCTACTGATATTGCACATCCTTCTGAAGATGGTTTGTGGAATGACAGAGGACCAAGAGATCTCACTGCATGCTCTGGCGACGCCATGGAAGGTCCAAGCACAAGGGGCTTTGAGTTGTTTTCCAGATCTCCTGTTAGGAAAGCGGAGCAAACTGACCAATCAAGCCTTAGCAAACATAAAGGTGGAAGTCTTTCAATGGAGGGGCTTGATCTTTCTCTTAGCTTGCCTAATGTTTTGTTACCTATTGGTGCCCATGAGACTACACCAGCCCCTGGATCCCCCAGTCAAGCTCGTAGTGTACAGTCTTTAAGTACATTTCGTACCAACTCAGAAGGATTTACTGCGTCAATGTCTTTCTCAGGTTCTCAATCTTTTTATCACAATCCAAGCTGTTCTCTCACACAAAATTCTGTCGACTATGAACAATCTGTTCATAGTCGCCCATTATTTCAGGGAATAGATCAAGTTTCTCATGGAGGCTGGCAAGGTCAGTCTCAGACTGATCCCAAACACAAAGAAATTCCTTTCTGTCAAGGAACCTTGATTAATGGCACCGGCACTTTTTGTCAGTCTCAAGCAACGTGGGGTATTTTGGATGGTCAAGCTGTGAAAGGTCAGCCTTCTAGGGTTCTAGAAGGTAGCTCAAAAATGGCCAGTGGACTTGACAGGCAATTGAGTTTTCCTAAGCAGCTGTCAGGACAGTCAAGGCGCCACGATGATGTTAGATCTCCTTCACAGAGTGTTGGTTCTCATGACATTGGATCAAGTTATAGTTTCGACAAGAAGAGAGAAATGAGAGACAGGAGTAATGGTAGTTTATATAGATCTGCAAGCCAAAAGGATCAAGAACAATTTCCAATGGGTGGAACTGAGTTTGTTGAAGCAATCATTGCAAAAATATTTTCTGAACCAGTTCTTGTGATGGCTAAAAAGTTTCATGAAATGACTGGGCAGTCTCTATCATGTTTGAAAGAGAGCATTTGTGAGATTATGCTTAATGCAGAGAAGCGTAGGCAAATACTTCCATTTCAGAAAGTTCTGCAGAACAGGTCTGATATAACCTTGGAGGTTTTACTAAAGGCTCATCGAGTTCAATTGGAAATTCTGGTTGCTTTGAAAACAGGTTTAACTAATTTTATTCAGTTAGACAACAGCATTTCGTCTACTGATTTAGCCGAGATCTTTCTGAACTTAAGATGTAGGAATCTTTTATGCCGAAGTCAGTTGCCTGTGGACGAATGTGATTGCAAAGTTTGTGCACAGAAAAATGGCTTTTGCAGGGAATGTATGTGTCTTGTTTGTTCAAAGTTTGACAATGCATCAAATACATGTAGTTGGGTCGGGTGTGATGTTTGCCTTCATTGGTGCCATACAGACTGTGGATTACGTGAATCATATATTCGAAATGGACACAGTGCTACTGGGGTACAAGGGGTAACTGAGATGCAATTTCATTGTATTGCCTGTGATCATCCTTCAGAGATGTTTGGTTTTGTCAAGGAAGTGTTTCTAAATTTTGCAAAGGATTGGTCAGTTGAAGCTCTTTGCAAGGAACTTGAGTATGTGAAGAGAATATTTTCTGCCAGCAAAGACTTGAGGGGGAGACAGCTGCATGAGGTTGCTGGTCAAATGCTGCTAAGGTTGGCAAATAAGTCTAACCTTCAAGATGTTTATAACCACATCATGTCTTTCCTAAATGATGGAGATTCTTCCAAATCAGCCTTGACACACAACTTTCCTGCGAAGGGACAAATTAAAGAAAAGAATGCAGTTGCTGAGCCCAGTCAGGAAGCTGCCTGGATGAAATCTATTTATTCCGAAAAGATGCCTTTGTTAGAAAGGCCAGCAAACATCCTTTCGAGCTACGACCGGAATGATAAACGGACTCCACCACAAGAGTTGCCGATGAATGTCCAAAAGGATTATTGTTTTGATGAATTGGAGAGTGTAATTAAAATTAAACTGGCAGAGGCTAAATTGTTCCAAACACGTGCGGATGATGCCAGAAGAGAAGCTGAAGGCCTGAAACGCATTGCTCTTGCAAAGAATGAGAAAATTGAAGAAGAATATGTTAGCCGACTCTCAAAGTTGCGATTGGCTGAGACTGAGGAAATGCGTAAACAAAAATATGAAGAACACCAGGCATTGGAAAGAGCGCATGTGGAGTACTTTAACATGAAAATGAGAATGGAAGCAGACATTAATGATTTGCTACTGAAAATGGAAGCGACCAAAAGGAGTCTTGCCATGTGA 3591 0.4386 MKRLRSSEDLHSYADKNGCKDSNLNRSSSSSHRSFYYKPENVRKGLLSSSSSASRYDRDRTMDEDREGSRLVRKRSDHDFDSFDRRKGFDRYRDSGDSRGYGAGGDRGLIRSESFCGSRRDFPKGFRSERDRSRREGSVSSWRRFGGGLKDFDDSGRGSRVGLEDRVVRSPKSLRDVKSPTRSRDSESDQSKMRSPPRGSRDAKSKSKSPSWSKDSESEQSRSEQSKSVEVKKTEELQVESRSSSEMEEGELEPEPMPETEPQKASNAAPKDEDQTSIPLNAAEKEIQTENQLNETDTTMHEIPEELNKEEAKPEEDTNPAEQNVEKDEIPEELPDLQSDPTVKVHDTENEIETSVHNDNKEEDGLKVETSCKGETKEGGEQEKPLLYEEKHKQDKGRDLETSADSDKPELRKEVSTKNEMLKADGKMTETVTNNVKDKGKSVSVAPTDIAHPSEDGLWNDRGPRDLTACSGDAMEGPSTRGFELFSRSPVRKAEQTDQSSLSKHKGGSLSMEGLDLSLSLPNVLLPIGAHETTPAPGSPSQARSVQSLSTFRTNSEGFTASMSFSGSQSFYHNPSCSLTQNSVDYEQSVHSRPLFQGIDQVSHGGWQGQSQTDPKHKEIPFCQGTLINGTGTFCQSQATWGILDGQAVKGQPSRVLEGSSKMASGLDRQLSFPKQLSGQSRRHDDVRSPSQSVGSHDIGSSYSFDKKREMRDRSNGSLYRSASQKDQEQFPMGGTEFVEAIIAKIFSEPVLVMAKKFHEMTGQSLSCLKESICEIMLNAEKRRQILPFQKVLQNRSDITLEVLLKAHRVQLEILVALKTGLTNFIQLDNSISSTDLAEIFLNLRCRNLLCRSQLPVDECDCKVCAQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSATGVQGVTEMQFHCIACDHPSEMFGFVKEVFLNFAKDWSVEALCKELEYVKRIFSASKDLRGRQLHEVAGQMLLRLANKSNLQDVYNHIMSFLNDGDSSKSALTHNFPAKGQIKEKNAVAEPSQEAAWMKSIYSEKMPLLERPANILSSYDRNDKRTPPQELPMNVQKDYCFDELESVIKIKLAEAKLFQTRADDARREAEGLKRIALAKNEKIEEEYVSRLSKLRLAETEEMRKQKYEEHQALERAHVEYFNMKMRMEADINDLLLKMEATKRSLAM 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2554 1196 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 757 779 IPR004082 -
Prci6g2554 1196 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1091 1111 IPR004082 -
Prci6g2554 1196 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 883 903 IPR004082 -
Prci6g2554 1196 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1130 1152 IPR004082 -
Prci6g2554 1196 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 837 858 IPR004082 -
Prci6g2554 1196 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 796 811 IPR004082 -
Prci6g2554 1196 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 956 975 IPR004082 -
Prci6g2554 1196 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 811 826 IPR004082 -
Prci6g2554 1196 Coils Coil 1115 1135 - -
Prci6g2554 1196 Pfam Coiled-coil region of Oberon 1068 1184 IPR032535 -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 1 509 - -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 702 716 - -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 673 728 - -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 113 139 - -
Prci6g2554 1196 Pfam PHD - plant homeodomain finger protein 846 969 IPR032881 -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 147 249 - -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 299 425 - -
Prci6g2554 1196 CDD PHD_OBE1_like 876 935 IPR047578 -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 492 507 - -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 281 298 - -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 18 36 - -
Prci6g2554 1196 Coils Coil 1145 1165 - -
Prci6g2554 1196 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1194 IPR004082 -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 1 16 - -
Prci6g2554 1196 MobiDBLite consensus disorder prediction 56 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2554 Prci-Chr6 37316133 37321479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2554 846 979 PHD Gene Family AT5G57380 27.612 1.37e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2554 - - ahf:112789425 1481.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2554 6 37316133 37321479 Prci6g2554 6 37316133 37321479 ECH