Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2545 ATGTCTGAACCTCGTCGTAAGCGCCCCAAAATTGCCAGGGGAGAAGATGATTATATGCCTGGAAGCATTATCGAGATTGAGCTTCTTAAGTTTATGACCTTTGACTACTTAAAATGTAAACCTGGTCCTCGTCTGAATCTTGTTATTGGACCCAATGGTGCTGGGAAGAGCTCTCTTGTGTGTGCCATTGCGCTTGGCCTTGGGGGTGAGCCTCAGCTGCTGGGGCGAGCAACAAGTATTGGATCATACGTGAAGCGGGGAGAAGAATCAGGTTGCATTAAGATTACTTTGAGAGGGGATGGTAAAGATGAGCATATTACTGTTATTCGGAAAATAAATACTAACAACAAGTCTGAGTGGTTATTCAATGGAAAAGTAGTGCCCAAAAAGGATGTGATGGAAGTCATTCAACGGTTTAACATCCAAGTTAATAATTTGACTCAATTTTTACCCCAGGACAGGGTCTGTGAATTTGCTAAATTAACTCCTGTGCAACTTCTGGAAGAGACTGAAAAGGCTACTGGTGATCCCCAACTTCCAATCCTTCACTGTACTCTTGTTGAAAAAAGCCGTGCATTAAAGCAAATTGAACTGACTGTGAAGAAAAATGAAGAAACTTTGAAACAGCTGAAGGACCTTAATGCTGAACTTGAGAAGGATGTTGAGCGTGTCCGTCAAAGGGATGACCTACTTAAAAAGGCTGAGTCAATGAAAAAGAAACTGCCGTGGCTTAGATATGATATGAAGAAGGCTGAATACTTGGAAGTCAAAGAACGGGAAAATGATGCTAAGAGGAAGATGGAGGAAGCTGCAAAGATGTTGAATGATCTTAAAGAACCTGTTGAGAAACAGAAAAAGGACAAGGCAGCATTGGACACAAAATGTAAAAAAGTTGCCAGCCTTGTAAATGATAACGCCAAGAAGCGAATGGAACTTCTGGAGAAAGAAAACCATCTGGGTGTGGAATTGCAAGGAAAATACAATGAAATGGAAGATTTGAGGAGGCAGGAAGAAACTCGTCGGCAAAGATTTTTGAAGGCTAAGGAGGAACTTGCTGCTGCTGAACATGAACTGGAGAATCTGCCTCATTATGAACCTCCAAAGGAAGAGATTGAAAGACTGAAAGATGAAATTTTGAACTTGCAAAATTCTGCATCTCAAAAGAGGCTAGAGAAGTCAGAAACAGACAAATGTTTATATCAGAAAAGGTCATCATTAACGCAATGCATAGACAGGCTGAGAGAGATGTACAGTAAAAATACCAAGTGTTTGCATGCGTTACGAGATTCAGGGGCAGAGAAAGTAATGGAAGCTTATAAATGGGTGCAAGATAATCGCCATTTATTCAATAAGGAAGTTTATGGTCCTGTATTGCTAGAGGTCAATGTCTCAAAGCAGACTCATGCTGCCTTCCTGGAGGGTCATGTTCCTTATTACATCTGGAAGTCTTTCATTACTCAAGATTCTGGTGACCGGGACCTTTTGGTAAAAAATCTGAACTCCTTTGATGTTCCAGTATTAAATTATACTGGCGATGATAGAAGTCAGAGAGAGCCTTTTCAAATTTCTGAAGATATGCGTGCTCTTGGCATCTACTCCCGACTTGATGAAGTTTTTGATGCTCCTACAGCTGTTAAGGAGGTTTTGATTGGACAGTTTGGTCTGGATCATTCATATATTGGAACCAGAGACACTGATCAGAAGGCGGATAGGGTCCAAAATTTGGGCATTTTTGACTTTTGGACTCCAGATAATCACTATCGTTGGTCTAAATCTAGATATGGAAATCATGTATCAGGAATTGTTGAACAAGTACAACGCTCAAGACTTCTTTCATACAATATAGATGCTAGAGAAATTGAGAAGCTTAGAGCTCACAGAATGGACCTTGAAGAATCTATAGCAACCTTAGAAGCGACTTCTAAAAGGTTACAAGATGAGGAGAGACACCTAAGCAATGAATCAGCTAATCTTCGCAGACAGCGGGATGAAATAAACACTACTGTGCTTAAAGAGAAGGAAAAGCGCCGTGACATCATGCGCACTATTGATTTAAGGAAGAGGAAATTACACACAATGGAGGAGGAGGGTGATGTGGACATGGCTATTGCTAAGCTGACTGATGAAGCAAGAAATTGTAATATTCAGCGATTCCGCAATGCAATCAAAATTAAGAACCTACTTCTCGAGGCAATTGGTTATAGACAGAGTTTTGCTGAAAAACATATGGCTACTCTTGAATTTGATGCAAAGATTAGAGAGTTGGAGGCCTGTTTGAAGCAGCATGAGAAGCTTGGTTTGCAAGCATCATTACAATTTGAAACCTGTAAGAAGGAGACTGAAAATTGTCGACAGCAACTTTCCGAATGTTTGAGGCGTGCTGAATCAGTTGCTCCCATCACTCCAGATCTTGAGGAGGAATTTCTTGAGATGCCCACCACTATTGAGGATTTGGAAGCTGCTATCCAAGACACCACTTCTCAAGCCAATTCTATACTTTTTGTCAATCATAATGTGTTGGAACAATATGAGAACCGTGAACGTCAGATAGGAGCTTTAGCCACAAAACTTGAAGAAGATAAGAAGGAAGTAAGTAGGTGTCTGGCTGAAGTAGATACTCTAAAGGGTACATGGCTTCCAACATTGAGGAACCTCGTGGCACAGATAAATGAAACTTTCAGCCGTAATTTCCAAGAGATGGCTGTTGCAGGAGAAGTTTCGCTAGATGAGCGTGATGTGGACTTTGATCAGTTTGGGATACTCATAAAAGTGAAGTTCAGACCAACAGGACAGCTTCAAGTTCTGAGTGCCCATCATCAGTCTGGAGGGGAGCGATCAGTTTCTACTATTCTTTATCTTGTTTCTCTTCAAGATCTTACCAACTGCCCATTCAGAGTGGTTGATGAGATTAATCAGGGCATGGACCCAATAAACGAAAGAAAAATGTTCCAACAGCTGGTGAGAGCCGCCAGCCAGCCAAATACACCGCAATGTTTCTTGCTCACTCCAAAGTTGCTACCAGATCTGGAATACAGCGAAGTGTGCAGTATATTAAATGTAATGAATGGGCCATGGATTGAGCAAGTCTCAAAAGTTTGGGGTGAAGGTGATCGATGGGGGAAAATCGCAGAGTTGATGGTAGAGAATCAACAATAA 3156 0.4129 MSEPRRKRPKIARGEDDYMPGSIIEIELLKFMTFDYLKCKPGPRLNLVIGPNGAGKSSLVCAIALGLGGEPQLLGRATSIGSYVKRGEESGCIKITLRGDGKDEHITVIRKINTNNKSEWLFNGKVVPKKDVMEVIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKATGDPQLPILHCTLVEKSRALKQIELTVKKNEETLKQLKDLNAELEKDVERVRQRDDLLKKAESMKKKLPWLRYDMKKAEYLEVKERENDAKRKMEEAAKMLNDLKEPVEKQKKDKAALDTKCKKVASLVNDNAKKRMELLEKENHLGVELQGKYNEMEDLRRQEETRRQRFLKAKEELAAAEHELENLPHYEPPKEEIERLKDEILNLQNSASQKRLEKSETDKCLYQKRSSLTQCIDRLREMYSKNTKCLHALRDSGAEKVMEAYKWVQDNRHLFNKEVYGPVLLEVNVSKQTHAAFLEGHVPYYIWKSFITQDSGDRDLLVKNLNSFDVPVLNYTGDDRSQREPFQISEDMRALGIYSRLDEVFDAPTAVKEVLIGQFGLDHSYIGTRDTDQKADRVQNLGIFDFWTPDNHYRWSKSRYGNHVSGIVEQVQRSRLLSYNIDAREIEKLRAHRMDLEESIATLEATSKRLQDEERHLSNESANLRRQRDEINTTVLKEKEKRRDIMRTIDLRKRKLHTMEEEGDVDMAIAKLTDEARNCNIQRFRNAIKIKNLLLEAIGYRQSFAEKHMATLEFDAKIRELEACLKQHEKLGLQASLQFETCKKETENCRQQLSECLRRAESVAPITPDLEEEFLEMPTTIEDLEAAIQDTTSQANSILFVNHNVLEQYENRERQIGALATKLEEDKKEVSRCLAEVDTLKGTWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDERDVDFDQFGILIKVKFRPTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEVCSILNVMNGPWIEQVSKVWGEGDRWGKIAELMVENQQ 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2545 1051 Coils Coil 840 863 - -
Prci6g2545 1051 Coils Coil 296 316 - -
Prci6g2545 1051 Gene3D - 848 1011 IPR027417 -
Prci6g2545 1051 Coils Coil 371 391 - -
Prci6g2545 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 994 IPR027417 -
Prci6g2545 1051 FunFam Structural maintenance of chromosomes 5 847 1018 - -
Prci6g2545 1051 Coils Coil 620 664 - -
Prci6g2545 1051 Coils Coil 193 234 - -
Prci6g2545 1051 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 5 1045 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Prci6g2545 1051 Pfam RecF/RecN/SMC N terminal domain 23 991 IPR003395 -
Prci6g2545 1051 Coils Coil 250 277 - -
Prci6g2545 1051 Gene3D - 22 226 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2545 Prci-Chr6 37079987 37100911 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2545 1 1051 Structural Maintenance of Chromosomes family AT5G15920 63.939 0.0 1380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2545 K22803 - qsa:O6P43_001392 1565.82