Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2541 ATGTCCTCCTTTCAAGGGAAAGCAACTCCTATTGAGCCTACCACTATGATCGAGAAGGGTGGTCATCAAGATGGGGAGCAATATGATCAAATTCTCCAATTGTTGAAGAAAGATACAAATGAAGTAGTTGTAAGAGTAGTAAGAACAATTGATTATATTGAGGAACAAGTTTCAGGCTTCCATGGAAACCAGCAAGCAAAAGCTCAAGACAAGTTTCAGAAGCTAAAGTATAAATATAATAATATTGCAGGAATTGATAAGAGGCTTTTTGAAGTAGAAGAGATTGATATTGAATATTCTCATATTGTTGGAGATCATCATCATGAAGAAGGATTGAAGGAGAAAGATAGAATTGTGAGATTGCCAGGTCAGCCTCTGGCTAGGTTTTCTCAGTATGGAGGCTATGTGACTGTGAATGAAGAAGCAGGACGAGCCTTTTATTATTATTTCACTGAAGCTTGTCGTAATAAGGACAATCTACCTCTAGTTCTTTGGCTTAATGGAGGACCTGGATGTTCATCTCTTGCCTATGGAGCCATGCAAGAACTTGGACCCTTTAGAGTCAACAGTGATGGCAAAACACTTTTCAAGAACAGATATGCGTGGAACTATGTTGCAAATGTATTGTTTGTGGAGTCACCAGCTGGAGTGGGATTTTCATACTCAAACGAGACATCAGATTATGACCACAGTGGAGACAAAAGAACAGCTTCAGATAATTACATGTTCTTGTTGAATTGGTTAAAGAGGTTTCCAGAATACAAGAATAGGGATTTCTACATTACTGGAGAAAGCTATGCTGGTCACTATGTGCCTCAACTTGCTCAAACTATTCTCCAACATAACATCAAAGCTAACAAGACCATCATCAACCTCAAAGGAATCATGATAGGGAACGCAGCGATAAATGATGAGACAGATGATAAGGGAATGTACGATTTCTTAGGAAGCCACGTGATTATTTCGAATTCAACGGCTTATGAGATTGATAAGTTCTGTGATTTCTCTCCAAAAGCCACAGATCAACCTAAACGATGCAATGAAGCTATGGAGAAAGTAGATAAAGATTCTTACAATATTGATATCTACAACATTTATGCTCCTATTTGCAACAACCCTAATCTCACTGCCACCCCCAATCCCACCTCTATTGTTTTGGACCCATGTAATGAATATTATGTGATAGCATATATGAATAGACCTGAAGTTCAAGAGGCACTTCATGCTAATGTCACAAAACTGAAGTACGAGTGGTCAACTTGTAGTGTTGTGATTTCAATTTGGCAAGATAGCCCATCAACCACTCTTCCACTTATTCAAGAACTCATGGACCATGGAATTAGGGTTTGGATTTTCAGTGGGGACACAGATGGAAGAGTGCCAGTTACTTCAACACAATACTCCCTTAACGCTATGAAAATGAAGGTCAATACTACATGGCATCCTTGGTACTTCAATGGACAGGTTGCAGGATACACACAAGTGTATAAGGGAGAGCTAACATTTGCCACAGTGAGGCATGCAGGGCATCAAGTGCCAAGCTACCAGGCAGCTAGATCGCTCTCTTTGTTCAAACACTTCTTGGATGGCACTCCTCTTCCTGATACGACCAGATATTAA 1620 0.3975 MSSFQGKATPIEPTTMIEKGGHQDGEQYDQILQLLKKDTNEVVVRVVRTIDYIEEQVSGFHGNQQAKAQDKFQKLKYKYNNIAGIDKRLFEVEEIDIEYSHIVGDHHHEEGLKEKDRIVRLPGQPLARFSQYGGYVTVNEEAGRAFYYYFTEACRNKDNLPLVLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLFKNRYAWNYVANVLFVESPAGVGFSYSNETSDYDHSGDKRTASDNYMFLLNWLKRFPEYKNRDFYITGESYAGHYVPQLAQTILQHNIKANKTIINLKGIMIGNAAINDETDDKGMYDFLGSHVIISNSTAYEIDKFCDFSPKATDQPKRCNEAMEKVDKDSYNIDIYNIYAPICNNPNLTATPNPTSIVLDPCNEYYVIAYMNRPEVQEALHANVTKLKYEWSTCSVVISIWQDSPSTTLPLIQELMDHGIRVWIFSGDTDGRVPVTSTQYSLNAMKMKVNTTWHPWYFNGQVAGYTQVYKGELTFATVRHAGHQVPSYQAARSLSLFKHFLDGTPLPDTTRY 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2541 539 Pfam Serine carboxypeptidase 125 530 IPR001563 GO:0004185|GO:0006508
Prci6g2541 539 ProSitePatterns Serine carboxypeptidases, serine active site. 261 268 IPR018202 GO:0004185
Prci6g2541 539 MobiDBLite consensus disorder prediction 1 22 - -
Prci6g2541 539 Gene3D alpha/beta hydrolase 112 372 IPR029058 -
Prci6g2541 539 FunFam Carboxypeptidase 386 533 - -
Prci6g2541 539 FunFam Carboxypeptidase 112 372 - -
Prci6g2541 539 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 119 516 IPR001563 GO:0004185|GO:0006508
Prci6g2541 539 PRINTS Carboxypeptidase C serine protease (S10) family signature 247 272 IPR001563 GO:0004185|GO:0006508
Prci6g2541 539 PRINTS Carboxypeptidase C serine protease (S10) family signature 211 221 IPR001563 GO:0004185|GO:0006508
Prci6g2541 539 PRINTS Carboxypeptidase C serine protease (S10) family signature 198 210 IPR001563 GO:0004185|GO:0006508
Prci6g2541 539 PRINTS Carboxypeptidase C serine protease (S10) family signature 500 513 IPR001563 GO:0004185|GO:0006508
Prci6g2541 539 Gene3D - 435 530 - -
Prci6g2541 539 Gene3D - 389 425 - -
Prci6g2541 539 FunFam Carboxypeptidase 435 530 - -
Prci6g2541 539 SUPERFAMILY alpha/beta-Hydrolases 110 536 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2541 Prci-Chr6 36985302 37001198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2541 397 533 Calmodulin-binding Proteins AT2G22960 30.657 1.48e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2541 K16297 - fve:101308591 681.019