Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2534 ATGGATGATGGAGATATTCAGCTTTCAGATAATGCTATGTTGCTGAATCCAGAATCATCCAGTGATTTCCAGGCTTTAGCATCCATGAACACGATGAATGAATCATTCAAAGAGACCATGACTTGCACACACACTCACACCTGCAACCCTCCTGGCCCAGATGCTGTACATAGACACACATGCTATCACACTCACACTTGCAACCCTCCTGGTCCAGATGCTGTACATACACATACATGCTATCACAGCCACACGCAAGTTTTTGCGCCAGAAGATGACAAGGAGCATACCAAATCAAAGGCAAGAAGGCCTTCGAGTAACAGAGAAGCAGTTAGGAAGTATAGGGAGAAGAAGAAGGCGCATACAGCTTATTTGGAGGAGGAAGTCAAAAGATTGCATCTGCAGCATGTGCAACTAGTCAGGAAACTTCAGAAGCAGGCAATTCTTGAGGCCGAGCTTTCGAGGTTGAGAAGCATTTTGATAGATATTAGGAGGAAAATTGGCAATGAATTAGGTGTTTTCCCTTATGAGAAGCAGTGCACGTCTTATGGTCAGACCAATTTCCCATGCTTCAATAGTCCACATGCAGGATCATCATCTCAGGTTGCTGTTTGTGGAAATGGTAAATTGTTAGCTCAATGGGAAAGGAACTGTCAACCTGCCATTTTAGATTGTCAAGTAAACGTAGATAAGAAGGAAAGTACTGAAGAAGAAGAAGAAGAAGAAGACAGCATTGAAGGTGATGGATAG 750 0.432 MDDGDIQLSDNAMLLNPESSSDFQALASMNTMNESFKETMTCTHTHTCNPPGPDAVHRHTCYHTHTCNPPGPDAVHTHTCYHSHTQVFAPEDDKEHTKSKARRPSSNREAVRKYREKKKAHTAYLEEEVKRLHLQHVQLVRKLQKQAILEAELSRLRSILIDIRRKIGNELGVFPYEKQCTSYGQTNFPCFNSPHAGSSSQVAVCGNGKLLAQWERNCQPAILDCQVNVDKKESTEEEEEEEDSIEGDG 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2534 249 Gene3D - 88 162 - -
Prci6g2534 249 MobiDBLite consensus disorder prediction 234 249 - -
Prci6g2534 249 CDD bZIP 100 154 - -
Prci6g2534 249 MobiDBLite consensus disorder prediction 90 113 - -
Prci6g2534 249 MobiDBLite consensus disorder prediction 230 249 - -
Prci6g2534 249 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 66 IPR031106 GO:0003700|GO:0006351
Prci6g2534 249 SUPERFAMILY Leucine zipper domain 100 145 IPR046347 GO:0003700|GO:0006355
Prci6g2534 249 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 97 163 IPR004827 GO:0003700|GO:0006355
Prci6g2534 249 Pfam Basic region leucine zipper 98 152 IPR004827 GO:0003700|GO:0006355
Prci6g2534 249 SMART brlzneu 95 162 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2534 Prci-Chr6 36866445 36868216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2534 1 190 bZIP Transcription Factor Family AT2G16770 42.487 4.82e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci6g2534 bZIP_2 4.1e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2534 K25785 - vvi:100255414 262.692