Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2527 ATGGCAAAGAGGAAGGGCTGGTTTAGTTTCGTGAAGAGGTTCTTTGTATGGGACACCCAGTCCAAACCAGAGAAGAAAGAGAAAAGAAGAAAATGGATGTTCGGTATGGGAAGGCTAAAGGTAAAGAGATTACCTTCTATTGCAGCTCCACAGGCAACACTAAAAGAAATAAAAGATGTTGAAAAGCTCAATAATGGCAACCAATGTCATGAAGAAACTGAAGAATTACAAGTTGTCAAGTCCAGAATTGAGACTCGTCAACCCACATACCAATGCCGGAGGGCAATTGAAGAATCTGCAGCCATCAAAATTCAAACTACATTTCGGGGTTACCTTGCAAGGAAGGCTCTAAGGGCATTGAGGGGAATAGTGAAGCTACAAGCTATCATCAGAGGCAGAGCAGTAAGACGGCAAACTATGAGCACTCTGAAGTGCTTGCAGTCACTTGTAGATATTCAATCACAGGTCTGTGCCAAGAGACTCCAAATAGTTAAAGGCAGATGGGCTCATGATGAGAGCGAAGAGATTCCAAGTTCAAGAGACAAGATCATAAGGATGGATTCAAACAGTGAAAGGAGGTGGGATTACAGCATTTTGTTGAAGGAAGAGACAGATGCTTCTTACATGAGCAAGAAAGAAGCAGAAGTTAAAAGAGAGCGAATGAAAGAATACTCATTCAACCATCGAAGATCAGCAGAATCAGAGAGAAAGAAGGTAAATGGAAGGTGGAGGTATTGGATGGAGCAGTGGGTAGATACCCAACTTTCCAAAAGTAAAGAACTTGACGATTTAGATTCAGTTTTCAGTTCACATTACAGAGGGGGGGAAGAAGAGGGAGGAGGAAGAAGACAGCTTAATCTGAGAAATATTCAGAGTCAAAGACAAAACCATATTGAAGGCCTATATTCTCCAAAACTTGCTCCAATTAGAAAACCCTCTCCTCACAGAAGACAACATTCTCTGGGAAATGATGAGCCTTCAAGCCCTTCTGTATTTCCAACATATATGGCAGCAACAGAATCAGCCAGAGCAAAAGCAAGATCTTCAAGCTCCCCAAAGCTAAGAACATTGAGTGTGGATACAGCAAAACTTGATGGGAACTCACCATGCAAAAAGAAGCTATCTTTTGTATCTTCTTCCATTAACCAGCAAAGATCTCCAAGTTTAAAGGGAGTTTCAGGACCTGTAAGATCAAGCAGGACAATGAAGGATCTAAGCATCAACTCAGATAGCTCATTTCTGCACGGATACAACAGAGATTGGGATGGACCAGGTATCTTCAAATGA 1287 0.4172 MAKRKGWFSFVKRFFVWDTQSKPEKKEKRRKWMFGMGRLKVKRLPSIAAPQATLKEIKDVEKLNNGNQCHEETEELQVVKSRIETRQPTYQCRRAIEESAAIKIQTTFRGYLARKALRALRGIVKLQAIIRGRAVRRQTMSTLKCLQSLVDIQSQVCAKRLQIVKGRWAHDESEEIPSSRDKIIRMDSNSERRWDYSILLKEETDASYMSKKEAEVKRERMKEYSFNHRRSAESERKKVNGRWRYWMEQWVDTQLSKSKELDDLDSVFSSHYRGGEEEGGGRRQLNLRNIQSQRQNHIEGLYSPKLAPIRKPSPHRRQHSLGNDEPSSPSVFPTYMAATESARAKARSSSSPKLRTLSVDTAKLDGNSPCKKKLSFVSSSINQQRSPSLKGVSGPVRSSRTMKDLSINSDSSFLHGYNRDWDGPGIFK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2527 428 SMART iq_5 96 118 IPR000048 GO:0005515
Prci6g2527 428 Gene3D - 97 147 - -
Prci6g2527 428 MobiDBLite consensus disorder prediction 377 398 - -
Prci6g2527 428 PANTHER IQ-DOMAIN 5-RELATED 1 377 - -
Prci6g2527 428 Pfam Protein of unknown function (DUF4005) 313 385 IPR025064 -
Prci6g2527 428 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Prci6g2527 428 MobiDBLite consensus disorder prediction 295 332 - -
Prci6g2527 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 140 IPR027417 -
Prci6g2527 428 Pfam IQ calmodulin-binding motif 99 118 IPR000048 GO:0005515
Prci6g2527 428 ProSiteProfiles IQ motif profile. 121 148 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2527 Prci-Chr6 36765284 36769051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2527 1 413 IQD Protein Family AT5G13460 45.106 1.01e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2527 - - gmx:100800192 466.077