Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2517 ATGAGAATACTCAAACCCACCATCCTCAGGTGCTCATCTCTATCTGTTGATCTCTATCATCGCATAGAGTTGCAAGCCTTCATCCTTGAAGCAAAGAGTGATCATGCAAGCAGGCAAAGAGGGAGAGTGAGGGAGATGGGTTTGATTTCGCAGAGGGAGGAATGGGCTTTTAGCCATATCTTCACTGTAGCTCTAAACGCTGCTATCGAGCTCGACTTGTTCGACATCATCACCAAGGAAGAAGAAGAAGGAACTCATGTCGGCTTTAGAAATAGCTTCCAAGCTTTCATGTTCATGTCAACACAAAGACTTGGTTCTCAGGTTGGATCGTCTCTTGAGGCTTCTCACAAGCTGAACTTTAAGGATGCAATCACTGACGAAGACAATGACTTGTTCAAGAAAATTCATGGAATGCCAATTTACCAATACGCAGAGACAGATCCAACATGGAACAAGACTTTCAACAAAGCAATGGCCAATATTAGCAACCTACAAATGAGAAGGACGTTAGAAATATACAAAGGATTTGAGGGAGTATCAACACTTGTTGATGTCGGAGGTGGCACTGGTCAAAAACTAGCAATGATTGTCGCTAAGTATCCTTCAATTAAGGGTATCAATTTTGATTTGCCCCATGTTAATTCAAAATTCACCACCCCATTCAGGCTATTTGCCACAATTGGTCTGATGAAAAAAAGCATAAAACTTTTGAGCGAATGCCATGAAGGATTGCTTGAAAATGGAAGGCTAATTGTGATGGACTTAATAATGCCAAAAGCAATTGGACCAACAGAAGAAGCCAAGCTTGTATTAAGCATGGACAATCTCATGTCATTTTTTGATAGTAAAGAAAGAACTGAAAGAGTTTGA 870 0.4069 MRILKPTILRCSSLSVDLYHRIELQAFILEAKSDHASRQRGRVREMGLISQREEWAFSHIFTVALNAAIELDLFDIITKEEEEGTHVGFRNSFQAFMFMSTQRLGSQVGSSLEASHKLNFKDAITDEDNDLFKKIHGMPIYQYAETDPTWNKTFNKAMANISNLQMRRTLEIYKGFEGVSTLVDVGGGTGQKLAMIVAKYPSIKGINFDLPHVNSKFTTPFRLFATIGLMKKSIKLLSECHEGLLENGRLIVMDLIMPKAIGPTEEAKLVLSMDNLMSFFDSKERTERV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2517 289 PANTHER O-METHYLTRANSFERASE 113 288 IPR016461 GO:0008168
Prci6g2517 289 Pfam O-methyltransferase domain 120 216 IPR001077 GO:0008171
Prci6g2517 289 Gene3D Vaccinia Virus protein VP39 232 288 IPR029063 -
Prci6g2517 289 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 287 IPR029063 -
Prci6g2517 289 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 12 289 IPR016461 GO:0008168
Prci6g2517 289 Gene3D Vaccinia Virus protein VP39 110 219 IPR029063 -
Prci6g2517 289 Gene3D - 33 109 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2517 Prci-Chr6 36644387 36656459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2517 119 288 Monolignol Biosynthesis Gene Families AT5G54160 38.860 3.26e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2517 K13066 - pcin:129314120 571.622