Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2514 ATGGCTTTGGATTCCAGAGAGATCAATCATCATAAGGTGGAAGAAGATGACTCATATTGTCTTTCTGCCATGCATCTGTGTTGTAGTCAGATCTATTCTGCAGTTTTAAACGCAGCTCTTGAGCTCAACTTGTTTGAGATCATAGCTAAGGAAGGAGGAAGACACGTGTCAGCCTCTGAAGTTGCCTCAAAGCTTCCTAGTTCATCTCAGCACAAGGACTTGGCTTCCAGAATCGATCGTCTCTTGAGGCTTCTTGCAAGTCACTCTCTTCTGAATTGTTCAGTTTGTGAAAAGGAAGATGGTGGCTCTGAGAGACTCTATGCGATTTCTCCTGTGGGAAAGTACTTTGTTGGTGGGGACGATAATGGCGGATTCTTGGCTGTCTTCTCATCATTCATGTGTCACAGAGCACTTATGGATGCTTGGTTGAATTTTAAGGATGCAATCATAGACGAAAACAATGACTTGTTCAAGAAAGTTCATGGCATGCCAATGTACCAATATGCAGAGAAAGATCCAAAGTGGAACAGTATTTTCAACAAAGCAATGGCCAACATTTGTAAGATAGAGATGAACAGAATATTGGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATGTTGGAGGAGGCACTGGTCAAAACCTTAAAATGATCATCTCCAAATATCCTTCAATTAAGGGCATTAATTTTGATTTGCCCCAAGTCGTTCAAAATGCACAACCTGATCCAGGGATTGAGCATATTGGAGGAGATATGTTTGAAAGTGTTCCAAAAGGCGATGCCATAATACTAAAGGCTGTATGTCACAATTGGTCAGATGAAAATAGCATAAAAGTATTGAGCAAATGTCATGAAGCATTACCAGAAAAAGGGAAGGTGATAGTGGTGGAATTCATAATGCCAGACACAATTGAAGCAACAGAAGAAGCCAAGTTTGTAGCAAGCATAGACAATCTCATGTTCCTTCATGATGGAAGAGAAAGAACTGAGAAAGAGTTTGAGTCCCTTTGCAAACGTTCTGGCTTTTCTGGTTTCAAAGTTGCTTGTCGTGCATTCTCTGTTCTTGGAGTCATGGAGTTCTGCAAATAA 1098 0.4044 MALDSREINHHKVEEDDSYCLSAMHLCCSQIYSAVLNAALELNLFEIIAKEGGRHVSASEVASKLPSSSQHKDLASRIDRLLRLLASHSLLNCSVCEKEDGGSERLYAISPVGKYFVGGDDNGGFLAVFSSFMCHRALMDAWLNFKDAIIDENNDLFKKVHGMPMYQYAEKDPKWNSIFNKAMANICKIEMNRILEIYKGFEGISTLVDVGGGTGQNLKMIISKYPSIKGINFDLPQVVQNAQPDPGIEHIGGDMFESVPKGDAIILKAVCHNWSDENSIKVLSKCHEALPEKGKVIVVEFIMPDTIEATEEAKFVASIDNLMFLHDGRERTEKEFESLCKRSGFSGFKVACRAFSVLGVMEFCK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2514 365 CDD AdoMet_MTases 206 303 - -
Prci6g2514 365 Gene3D Vaccinia Virus protein VP39 119 365 IPR029063 -
Prci6g2514 365 Pfam O-methyltransferase domain 142 346 IPR001077 GO:0008171
Prci6g2514 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 362 IPR029063 -
Prci6g2514 365 Gene3D - 2 116 IPR036388 -
Prci6g2514 365 PANTHER O-METHYLTRANSFERASE 29 348 IPR016461 GO:0008168
Prci6g2514 365 FunFam Caffeic acid O-methyltransferase 120 365 - -
Prci6g2514 365 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Prci6g2514 365 FunFam Caffeic acid 3-O-methyltransferase 2 116 - -
Prci6g2514 365 Pfam Dimerisation domain 35 86 IPR012967 GO:0046983
Prci6g2514 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 365 IPR016461 GO:0008168
Prci6g2514 365 SUPERFAMILY "Winged helix" DNA-binding domain 14 121 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2514 Prci-Chr6 36547814 36551388 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2514 16 357 Monolignol Biosynthesis Gene Families AT5G54160 49.128 1.23e-114 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2514 - - gmx:100784030 452.595