Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2511 ATGGATTTGCTAGATTCCAAAGAGAAACAGGATGACGAGATTCCAAAGACTGTGAACGAAGAAGAAGAAGATTTGTCTGTGCTTTCAGCCTTTCTTCTTCGTAGCAGCCAGATCTTCTCGGCAGCTCTGAACGCGGCCATAGAACTGAACTTGTTCGACATCATCGCCGAGGAAGGAGGAGGAAGACGCGTGTCAGCTTCTGAGGTGGCTTCTCGGCTTCCAAGTTCATCTCAACACAGAGACTTGGCTCTCAGAATCGATCGGCTCTTGAGGCTTCTCGCGAGTCACTCCCTTCTGAGTTGTTCGGTTCGTGAGAACGAAGACGGTGACACTGAGAGAGTTTATGCAATTTCTTCCATTGGCAAGCACCTTGTGAGTGGATCCTTGGGATTCGTACCAATCTTCTCTCATCCTGCACTCATGCAAGCTTGGGTCAACTTTAAGGATGCAATAATAGACGAAGACAATGACTTGTTCAAGAAAATTCATGGAATGCCAATGTACCAATACGCAAAGACAGATCCAACATGGAACAAAACTTTCAACAAAGCAATGGCCAACGTTTGCAATATAGAGATGAGAAGGATATTGGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATGTTGGAGGTGGAACTGGTCAAAACCTTAAAATGATTGTCTCTAAGTATCCTTCAATTAAGGGCATCAATTTTGATCTGCCCCAAGTCATTCAAAATGCACCATCCCTTCAAGGGATTGAGCATGTTGGGGGAGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCATAATATTAAAGGCGGTATGTCACAATTGGTCAGATGAAAATAGCATAAAAGTGTTGAAGAAATGTCATGAAGCATTACCAGAAAAAGGGAAGGTGATAGTGGTGGAGTTTATAATGCCAGAAGCAATTAGGGAAACAGAAGAAGCCAAGTATGTATCAATCTTGGACACTCTCATGTTCCTTCATGATGGAAGAGAAAGAACTGAAAAAGAGTTTCAGTCTCTTTGCTTACGTTCTGGATTTTCAAGCTTCAGTGTTGCTTCTCGTGCTTTCTCTGTCCTAGGAGTCATGGAATTTTGCAAATAA 1104 0.423 MDLLDSKEKQDDEIPKTVNEEEEDLSVLSAFLLRSSQIFSAALNAAIELNLFDIIAEEGGGRRVSASEVASRLPSSSQHRDLALRIDRLLRLLASHSLLSCSVRENEDGDTERVYAISSIGKHLVSGSLGFVPIFSHPALMQAWVNFKDAIIDEDNDLFKKIHGMPMYQYAKTDPTWNKTFNKAMANVCNIEMRRILEIYKGFEGISTLVDVGGGTGQNLKMIVSKYPSIKGINFDLPQVIQNAPSLQGIEHVGGDMFESVPKGDAIILKAVCHNWSDENSIKVLKKCHEALPEKGKVIVVEFIMPEAIRETEEAKYVSILDTLMFLHDGRERTEKEFQSLCLRSGFSSFSVASRAFSVLGVMEFCK 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2511 367 SUPERFAMILY "Winged helix" DNA-binding domain 27 127 IPR036390 -
Prci6g2511 367 Gene3D - 8 124 IPR036388 -
Prci6g2511 367 FunFam Caffeic acid O-methyltransferase 124 367 - -
Prci6g2511 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 362 IPR029063 -
Prci6g2511 367 PANTHER O-METHYLTRANSFERASE 33 350 IPR016461 GO:0008168
Prci6g2511 367 CDD AdoMet_MTases 208 305 - -
Prci6g2511 367 PIRSF O-mtase 6 367 IPR016461 GO:0008168
Prci6g2511 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 367 IPR016461 GO:0008168
Prci6g2511 367 Pfam Dimerisation domain 42 94 IPR012967 GO:0046983
Prci6g2511 367 Gene3D Vaccinia Virus protein VP39 128 367 IPR029063 -
Prci6g2511 367 Pfam O-methyltransferase domain 144 348 IPR001077 GO:0008171
Prci6g2511 367 FunFam Caffeic acid 3-O-methyltransferase 6 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2511 Prci-Chr6 36511241 36515341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2511 23 359 Monolignol Biosynthesis Gene Families AT5G54160 47.384 6.46e-108 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2511 - - ag:AAB48059 397.512