Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2504 ATGGCTTCATTGGGTTCTAAAGAGACTTGTCCTAATGAAGAACCAGAAGATTCATATGCCCTTTCGGCCATGCTTCAGTGTTGTAGCCAGATCTATTGTGCAGTTCTTAAAGCTTCGCTTGAGCTCAACGTGTTTGAGATCATAGCTAAGGAAGGAGGAAGACATGTGTCAGCTTTTGAAGTTGCCTCAAAGCTTCCAAGTTCATCTCAGCACAAAGAATTGGCTTTCAGGATAGATCGTCTCTTGAGGCTTCTTGCAAGTCACTCTCTTCTGAATTTTTCAATTGGTGAAAAGGAAGATGGCAGCACTGAGAGACTCTATGCGATTTCTCCGGTGGGAAAGTACTTTGTTGGTGGGGATGATGGAGGATTCTTAACTCTCTTCTCATCATTCATTTGCCATAAGGCACTTATGGATGCTTGGATGAATTTTAAGGTGGCAATTATAGAGGAAGACAATGACTTATTCAAGAAAGTTCATGGAATGCCAATGTACCAATACGCTGAGAAAGATCCAACATGGAACAATATTTTCAACAAAGCAATGGCCAACCGTTGCAACATAGAAATGAGAAGAATATTGGAAATATACAAAGGATTTGAGGGAATATCAACACTTGTTGATGTTGGTGGTGGAACTGGCCAAAACCTCAAAATGATTGTCTCAAAGTATCCTTCAATTAAGGGAATCAATTTTGATCTGCCCAATGTTATTCAAAACGCAACACCTCATCCAAGGATCGAGCATGTTGGAGGGGATATGTTTGAAAGCGTTCCAAAAGGGGATGCCATTATGTTGAAGGCTGTGTGCCACAATTGGTCGGATGAAAATAGCATAAAAGTGTTGAGGAAATGCCATGAATCGTTGCCAGAAAAAGGGAAGGTCATAGTAGTGGAATACATAATGCCTGAAGAAATTGGAGCAACAGAGGAAGCTAAGTTCGTAGCAAGCTTGGACAACATCATGTTTCTTCATGGTGGAGGAGAACGAACTGAGAAAGAATTTCAATCTCTTTGCAAATGTTCTGGCTTTTCTGGTTTCAAAGTCGCTTCTTGTGCTTTCTCTGCTTTAGGAGTCATGGAATTCTACAAGTAA 1095 0.4073 MASLGSKETCPNEEPEDSYALSAMLQCCSQIYCAVLKASLELNVFEIIAKEGGRHVSAFEVASKLPSSSQHKELAFRIDRLLRLLASHSLLNFSIGEKEDGSTERLYAISPVGKYFVGGDDGGFLTLFSSFICHKALMDAWMNFKVAIIEEDNDLFKKVHGMPMYQYAEKDPTWNNIFNKAMANRCNIEMRRILEIYKGFEGISTLVDVGGGTGQNLKMIVSKYPSIKGINFDLPNVIQNATPHPRIEHVGGDMFESVPKGDAIMLKAVCHNWSDENSIKVLRKCHESLPEKGKVIVVEYIMPEEIGATEEAKFVASLDNIMFLHGGGERTEKEFQSLCKCSGFSGFKVASCAFSALGVMEFYK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2504 364 Pfam O-methyltransferase domain 141 345 IPR001077 GO:0008171
Prci6g2504 364 Gene3D - 32 193 IPR036388 -
Prci6g2504 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 361 IPR029063 -
Prci6g2504 364 Gene3D Vaccinia Virus protein VP39 175 352 IPR029063 -
Prci6g2504 364 PANTHER O-METHYLTRANSFERASE 31 354 IPR016461 GO:0008168
Prci6g2504 364 PIRSF O-mtase 3 364 IPR016461 GO:0008168
Prci6g2504 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 364 IPR016461 GO:0008168
Prci6g2504 364 SUPERFAMILY "Winged helix" DNA-binding domain 19 121 IPR036390 -
Prci6g2504 364 CDD AdoMet_MTases 205 302 - -
Prci6g2504 364 FunFam Caffeic acid 3-O-methyltransferase 3 116 - -
Prci6g2504 364 FunFam Caffeic acid O-methyltransferase 119 364 - -
Prci6g2504 364 Pfam Dimerisation domain 35 86 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2504 Prci-Chr6 36381554 36384734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2504 1 364 Monolignol Biosynthesis Gene Families AT5G54160 46.995 3.22e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2504 - - pcin:129312384 456.062