Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2502 ATGTCTTGCAAGCGAGTAAGGGCACAAAGTAGCAAACACCAGAAAAGTAACCTAGACGAACCAGAGGGCAGTAGAAGTCGGCGGAGGAAAAGGAGAGAAGAGCCTCAAAAACTCAAGAGGGTTTCTCGCACACCAGGTATTGTGAAGCGAGGCAGCGACCGGTGCAGCCGATATGGTTTGAAGACTGAACTCTGCCGATTCAGTGGGGGCAAAATCTACCCCGGGAAAGGCATTAGATTTGTTCGTGCTGATTCTCAGGTCTTCCTGTTTGCCAATTCAAAATGCAAGAGGTACTTCCACAACAGATTGAAGCCATCAAAGCTCACCTGGACTGCCATGTACAGGAAGCAACACAAGAAGGACATTGCCCAAGAAGCTGTGAAGAAGAGGCGCCGCGCCACCAGAAAGCCTTACTCTAGATCCATTGTCGGTGCGACTCTGGAAGTTATCCAGAAGAAAAGAACAGAAAAACCAGAGGTCAGAGATGCTGCTAGAGAAGCTGCCCTTCGTGAGATTAAGGAGAGGATCAAGAAAACTAAGGATGAAAAGAAGGCTAAGAAGGCAGAGGTGATGGCCAAGGCACAGAAAGCACAAGGAAAAGGAAACGTTCCCAAGGGTGCTGCCCCCAAAGGCCCTAAACTTGGTGGAGGTGGCGGGAAGCGTGAGTTACATTTTTTTTGGCTGAGAATTAGATAG 696 0.4885 MSCKRVRAQSSKHQKSNLDEPEGSRSRRRKRREEPQKLKRVSRTPGIVKRGSDRCSRYGLKTELCRFSGGKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATRKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKAQKAQGKGNVPKGAAPKGPKLGGGGGKRELHFFWLRIR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2502 231 Gene3D Ribosomal protein L24e 60 121 IPR038630 -
Prci6g2502 231 MobiDBLite consensus disorder prediction 177 220 - -
Prci6g2502 231 Gene3D - 126 199 - -
Prci6g2502 231 Pfam Ribosomal protein L24e 61 124 IPR000988 -
Prci6g2502 231 FunFam 60S ribosomal protein L24 60 121 - -
Prci6g2502 231 Coils Coil 169 200 - -
Prci6g2502 231 MobiDBLite consensus disorder prediction 177 193 - -
Prci6g2502 231 ProSitePatterns Ribosomal protein L24e signature. 67 84 IPR023442 -
Prci6g2502 231 MobiDBLite consensus disorder prediction 12 29 - -
Prci6g2502 231 SMART 4TRASH 65 103 IPR011017 -
Prci6g2502 231 CDD Ribosomal_L24e_L24 60 113 IPR000988 -
Prci6g2502 231 MobiDBLite consensus disorder prediction 1 50 - -
Prci6g2502 231 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 63 115 - -
Prci6g2502 231 PANTHER 60S RIBOSOMAL PROTEIN L24 61 213 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2502 Prci-Chr6 36351347 36355405 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2502 60 214 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.161 1.73e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2502 K02896 - csv:101206866 237.654