Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2445 ATGGCTGCTGAGGTTGTGGGTGGAGCTTTTCTCTCTGCTTTTCTTCAAGTCATTTTTGATAGACTGGGTCCTACTTCTACCATATACAACTACTTCCGATCAAGAAAGCTCGAGGATCGATTGCTGGAAAACCTCCATATCACCCTCATCTCTGTGAATAAAGTGCTTGATGATGCAGAAGCAAGGCAGTACACAAATTCCCATGTCAAGGAGTGGCTTCAGAAGCTCAAACATGCTGTTTATGTGGCTGATGACCTCTTAGATAAGATTGCTACGAAGGCAACCAGGTTGAAGATCGAAGCTGAGACTCAACCTGCTACCAGTAAGGTACGGTGCTTCTTTAATTGTTTTGTTAATCCATTTGACAAACGCATGGAAGCTAGAATCCAGGAAGCGCTTGACGTCCTGGAGTTCCTTGTAAAACAAAAGGATGCTCTGGGATTGAAGGAAGGCTCTGGTGGTGGTAGCGAAGTTGGAGTTGGTGGGAAAGTATCCTCTAGATTGCCAACGACATCTCTGCTTCCTGATGAGTCCGGCATTTATGGCAGAGATGGTGATAAAGAAAAAATAATTCGTCTTTTACTTGATGAAAATCTGAGCAGGGACCCAGTATCTGTGATTTCTGTAGTGGGTATGGGTGGCTTGGGGAAAACCACTCTTGCTCAACTGGTGTACAATGATCGGAGGATGAAGGATCAATTTCAGCTCAAAGCTTGGGTGTGTGTTTCCGAAGAATTTGATGTTTTCGGAATTACAAAAACAATACTTTCTGCACTTCACTGTCCAATAACAGGACATGAAGATCTAAATCAGCTTCAATTGAAATTGCAAGAGAAATTGACGGGGAAGAAATTGTTGCTGGTTCTCGATGATGTCTGGAATGACCAGAAATCCGATTTGGAATCATTACAAGTTCCTTTTCGTTCTGGGGCTTCTGGAAGTAAGATCCTTGTTACAACACGTGATAAAAAGGTAGCATCAGCCATGGTCTCTGTTGAAGTGCATCGCATAGCTTTACTAAATGAAGAAGATGGTTGGAAGTTATTTGAGGAACATGCGTTCAAAAACAACGATGCTAGCTCTTGTTCAAGCCTACAGGCAATTGGCAAAAAAATTGTTGAAAAGTGCGACGGGTTGCCTCTAGCCATAAAATCATTGGGTGGCCTCTTGCAAACAAAATTTTCAGAGAAATATTGGAATGAAATTCTTGAGAGTGAGATATGGAAGTTACCAAAGAGTAATATAATGCCAGCTCTACGGCTAAGCTATCATTATCTTCCTTCTCATTTGAAGAGGTGTTTTGCGTTCTGTTCTATATTTCCTAAAGACTTTGAAATTGACAAGGTGTCTCTAATCCAAATGTGGATGGCAGAGGATTTGATACATTGCAACCAAGGAAATAAAAGTGTGGGGGAATTGGGGAATGGAATTTTGGATGAACTAGAATCAAGGTCATTTGTTGAGAAATCAGAAGAAATAATGACAAATTAA 1491 0.4111 MAAEVVGGAFLSAFLQVIFDRLGPTSTIYNYFRSRKLEDRLLENLHITLISVNKVLDDAEARQYTNSHVKEWLQKLKHAVYVADDLLDKIATKATRLKIEAETQPATSKVRCFFNCFVNPFDKRMEARIQEALDVLEFLVKQKDALGLKEGSGGGSEVGVGGKVSSRLPTTSLLPDESGIYGRDGDKEKIIRLLLDENLSRDPVSVISVVGMGGLGKTTLAQLVYNDRRMKDQFQLKAWVCVSEEFDVFGITKTILSALHCPITGHEDLNQLQLKLQEKLTGKKLLLVLDDVWNDQKSDLESLQVPFRSGASGSKILVTTRDKKVASAMVSVEVHRIALLNEEDGWKLFEEHAFKNNDASSCSSLQAIGKKIVEKCDGLPLAIKSLGGLLQTKFSEKYWNEILESEIWKLPKSNIMPALRLSYHYLPSHLKRCFAFCSIFPKDFEIDKVSLIQMWMAEDLIHCNQGNKSVGELGNGILDELESRSFVEKSEEIMTN 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2445 496 PRINTS Disease resistance protein signature 206 221 - -
Prci6g2445 496 PRINTS Disease resistance protein signature 376 390 - -
Prci6g2445 496 PRINTS Disease resistance protein signature 279 293 - -
Prci6g2445 496 Pfam NB-ARC domain 186 404 IPR002182 GO:0043531
Prci6g2445 496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 437 IPR027417 -
Prci6g2445 496 Gene3D - 25 130 - -
Prci6g2445 496 Gene3D - 339 421 IPR042197 -
Prci6g2445 496 Gene3D - 163 334 IPR027417 -
Prci6g2445 496 Pfam Rx N-terminal domain 10 103 IPR041118 -
Prci6g2445 496 PANTHER DISEASE RESISTANCE PROTEIN RP 48 488 IPR044974 GO:0006952
Prci6g2445 496 Gene3D - 422 495 IPR036388 -
Prci6g2445 496 FunFam Probable disease resistance protein At1g61300 164 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2445 Prci-Chr6 35932545 35934147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2445 179 449 WRKY Transcription Factor Family AT5G45050 25.806 7.59e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2445 - - pcin:129313137 756.903