Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2420 ATGATCGGAATTTGTGGAATTGGTGGGATTGGTAAATCAACAATTGCAAGAGCTGTGTATAACTCAATTGCTGATCAGTTTGATAGTTTATGTTTTCTTTCTAAAGTTAGAGAAATCTCTAACAAGCATGGCTTGTCACATCTTCAAGAGACATCACTTCATAAATTAGTCGAGGAGAAGGAAATCTCATTGGATGATGATTTTCATGAAGGAATTTCAATAATAGAACATAGGCTTCAAAGCAAGAAGATTCTTTTACTCCTTGATGATGTCAACAAATTGGAGCAGTTAAAAGCACTAGCTGGAAGATGTGACTGGTTCGGCTCAGGAAGTAGAATCATCATTATGACAAGAAATAAACAGCTCTTAAAAAGTCATGGGGTTACAAGAATTTATACTGTCAAGAAATTAGCCTTGGAAGTAATTGGCTCTAATTTATGTGATAAAGATGTTGATAAATGGAGTTCTGCATTAGAGGAGTACGAAAGAATACCTAATAAAGACGTCTTTGAAGTCCTTAAATTAAGCTATGATGCTTTGGAAGAAGAACATAAGGAAATTCTTCTTGACTTGGCTTGTTTCTTCAACGGAGAGAAATTAGGAGATGTCAAAAATATGTTGAAACTTGGGAGTTTAACTCACATAAATTTTAGCAAGTGCAAATTCCTAAGTCAAATACCAAACTTGTCAGGAGCTTTGAATTTAAAAGAATTGCGGCTTGATGATTGTACAAGTTTAATTGAAATTGATGACTCAGTTGAATCCTTAGACAATCTTAAAGAATTGAGCGCCATGTGA 798 0.3434 MIGICGIGGIGKSTIARAVYNSIADQFDSLCFLSKVREISNKHGLSHLQETSLHKLVEEKEISLDDDFHEGISIIEHRLQSKKILLLLDDVNKLEQLKALAGRCDWFGSGSRIIIMTRNKQLLKSHGVTRIYTVKKLALEVIGSNLCDKDVDKWSSALEEYERIPNKDVFEVLKLSYDALEEEHKEILLDLACFFNGEKLGDVKNMLKLGSLTHINFSKCKFLSQIPNLSGALNLKELRLDDCTSLIEIDDSVESLDNLKELSAM 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2420 265 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 208 263 IPR044974 GO:0006952
Prci6g2420 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 191 IPR027417 -
Prci6g2420 265 Pfam NB-ARC domain 2 131 IPR002182 GO:0043531
Prci6g2420 265 Gene3D - 1 130 IPR027417 -
Prci6g2420 265 Gene3D - 136 181 IPR042197 -
Prci6g2420 265 PRINTS Disease resistance protein signature 78 92 - -
Prci6g2420 265 PRINTS Disease resistance protein signature 254 265 - -
Prci6g2420 265 PRINTS Disease resistance protein signature 1 16 - -
Prci6g2420 265 Gene3D Ribonuclease Inhibitor 192 264 IPR032675 -
Prci6g2420 265 SUPERFAMILY L domain-like 199 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2420 Prci-Chr6 35736390 35737982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2420 2 215 WRKY Transcription Factor Family AT5G45050 27.907 8.26e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2420 - - pcin:129314109 516.538