Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2394 ATGGGTATGGCTGCAGAGACCCAGTTTCATGTTTTAGCTGTTGATGATAGTCTCATTGACAGAATGCTGATTGAGAGGCTCCTCAGGACCTCATCCTTCCAAGTTACTTCAGTGGATTCTGGAAGCAAGGCTTTGAAATTTCTTGGTTTAAATGCAGATGAACAGAGAAAGGGAGATACAGTCTCTGTTGATGCTGATAGCCATCAGGATTTAGAAGTGAACCTGATCATAACAGATTACTGTATGCCAGGAATGACAGGCTACGATCTACTGAGAAAAATCAAGGAATCTGAGTCTCTCAAGAACATACCAGTGGTGATTATGTCCTCAGAGAATGTCCCATCAAGGATCGACAGATGCTTAGAAGAAGGAGCTCAAGAATTTTTTCTGAAACCTGTTCAACAGTCAGATGTAAACAAGCTCAAGCCACATTTGATGAAATCAAGAGTTAAGGAAGAGGAAGACCAATTCATCAATAACCAAAGCAAGAGCATGCAAGAAGAAACCCATTAG 513 0.4113 MGMAAETQFHVLAVDDSLIDRMLIERLLRTSSFQVTSVDSGSKALKFLGLNADEQRKGDTVSVDADSHQDLEVNLIITDYCMPGMTGYDLLRKIKESESLKNIPVVIMSSENVPSRIDRCLEEGAQEFFLKPVQQSDVNKLKPHLMKSRVKEEEDQFINNQSKSMQEETH 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2394 170 CDD REC_typeA_ARR 11 141 - -
Prci6g2394 170 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Prci6g2394 170 Gene3D - 10 169 - -
Prci6g2394 170 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 159 IPR045279 GO:0009736
Prci6g2394 170 SMART REC_2 9 145 IPR001789 GO:0000160
Prci6g2394 170 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Prci6g2394 170 MobiDBLite consensus disorder prediction 149 170 - -
Prci6g2394 170 SUPERFAMILY CheY-like 8 153 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2394 Prci-Chr6 35447589 35448729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2394 1 163 Response Regulator Gene Family AT3G57040 67.073 1.20e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci6g2394 Response_reg 2.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2394 K14492 - qsa:O6P43_001477 263.462