Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2361 ATGAGTCCACCTGCTGAGGAGAAGATGGAAGATTGTAAGGCAATAACTGCCCCAGCTAACAACTCACAGGTCCATGGCGAACATGGTGACCCTGCTGACTCTCGATTCACTGAATTCTGCAAGAATGGGTTATCATTGGATGATGAAAGTTGCAGACAAGCAATGAAGCTGTTCACAGAAACCAAACACCTTCTACAGACCAATGTATCATCTCTTGGGAATGGAACGTATGAAGAAGCAGAACGGTTTTGGTTTTCCTTTGTCTTATACTGTGTCAAGAGATTGGCTGATAAGCATACAGACAGTGAGAAGAAAGTGACTGATAGCAATGGGCTTACGTTGTGCCAGATATTGAGAAAGGCAAAGCTAAACATTGTGGACTTTTTCAAAGAACTTCCTCAGTTTCTTGTTAAGAGTGGTCCAATTTTAAGTAATACATATGGCACAGATTGGGAAAACAGGCTTGAGGCAAAGGAGTTGCATGCAAACTTTCTTCACTTGAGCATTCTTAGCAAGTATTATAAGCGTGCATTCGGGGAGTTCTTCTTGGCAAATGATGTTATTGAAAAGAATTCAGCTGTTGCTAAGACTGGTGATTATGCATCTCAATATCATCGATTTGGATGGTTGCTTTTTTTGGCTCTTCGTGTTCATGCTTTCAGCCGTTTTAAAGACTTGGTGACTTGCACCAATGGTTTAGTTTCTATATTGGCTATCTTGATTATTCACATTCCTGCTCGCTTCAGAAATTTTAACATTCACGATGCTTCACGCTTTGTTAAGAAAAGTAGCAAAGGTGTGGATATCATTGCGTCACTTTGCAACATCTATGACACCTCAGAAGATGATGTGAGGAAGAATATGGGGAAAGCCAATAATTTAATCGCAGATATATTGAAGAAGAAGCCTTGTCTGGCATCTGATTGTGAAACTGTAACGCTTGAGAATATTGACAAAGATGGTTTGTTCTACTTTAATGATCTTATGGAAGAATCATCTCTGCCATCCTCTTTAGATATCTTAGAAAAAGATTATGATGATGCCATTCATAACGAGGGTGAGCTGGATGAGAGGTTGTTTATCAATGAGGAGGATAGCTTATTAGCTTCAGGAAGCTTGTCTGGAGGTTCAATGTCAGCAAGCAGTGTCAAGAGGAAATTTGATTCATTAGCGTCACCTGCAAAGACAATTACAAGTCCACTCTCTCCACAATGCTCTCCTGCATCTCATGCAAATGGCATTCCAATTAGTTCAAATTCAAAAATGGCAGCCACTCCTGTAACCACTGCTATGACTACTGCTAAGTGGCTTCGCACTGTCATATGTCCTCTTCCATCAAAGCCTTCACCTGAGCTGGAGAAATTTCTGGCATCATGTGATAGGGATGTCACAAATGATGTAGTGCGCAGGACACAGATTATATTGCAGGCTATTTTTCCTAGTAGTCCTTTAGGAGAGCGATGCTTAACTGGAAGCCTTCAAAATGCAAATCTCATGGACAATGTCTGGGCAGAACAACGGAGATTGGAGGCCTTGAAGTTATACTATAGGGTCTTGGAGGCAATGTGCAGGGCAGAGGCCCAAATACTGCATGCAACTAATTTAACCTCATTATTAACTAATGAGAGGTTCCATAGATGCATGCTTGCATGTTCCGCAGAATTAGTTTTGGCCACACATAAGACTGTAACAATGTTGTTTCCTGCAGTGCTGGAGAGGACTGGAATTACAGCTTTTGACCTTAGCAAGGTGATAGAAAGCTTCATTAGACATGAAGATTCTCTCCCAAGAGAATTGAGGCGACATCTGAATTCATTGGAAGAACGGCTTTTGGAGAGCATGGTATGGGAAAAGGGTTCCTCGATGTATAATTCTTTGACAGTTGCCAGACCTGCCCTCTCTTCGGAAATAACTCGTCTTGGATTGTTAGCTGAACCAATGCCATCATTAGATGCAATTGCAACTCATATTAACTTCTCTTGTGGGGGGCTGCCCCCTGGGCCTTCCTTACAGAAGCCTGAGACTTTACCAAATCAAAATGGGGATATTAGGTCCCCAAAACGACTCTGCACAGAATATCGAAGTGTGCTAGCAGAACGAAATTCATTTACCTCACCAGTGAAGGATCGGCTTCTACCCTTCAGTAACCTTAAGTCAAAGCTGCCCCCTCCTTTGCAGTCAGCTTTTGCAAGTCCAACAAGACCAAATCCAGGAGGTGGAGGGGAGACGTGTGCAGAGACGGGGATCAATATCTTTTTTGGAAAGATTGTTAAGTTGGCAGCAGTCAGAATAAGTGGCATGGTTGAAAGGCTTCAATTGTCTCAACAGATAAGAGAGAATGTGTACTGTCTTTTTCAACAAATACTAAACCAAAGGACATCAATCTTCTTCAACCGCCATATTGACCAAATTATTCTCTGTTGTTTCTATGGAATTGCAAAGATTTCTCAGCTGAACCTGACTTTTAGGGAGATCATTTTCAACTACAGGAAACAACCACAATGCAAACCACAAGTTTTTCGTGGTGTATTTATTGATTGGTCATCAACACGCCGCAATGGGAGAACAGGACAGGAGCATGTCGATATCATTACATTTTACAATGAAATATTCATCCCTTCTGTAAAAGCTCTTCTGGTTGAGCTTGGTCCTGGGGGAACAACTACAAAAGCCAACCGAATACCTGAAGCAAACAATAACAGTGATGGCCATTTAGCTCAGTGTCCTGGATCTCCTAAGATTTCTCCTTTTCCTAGCCTTCCTGATATGTCCCCAAAGAAAGTGTCTGCATCACACAATGTATATGTCTCGCCATTGCGATCAGCCAAGATGGATGCTCTAATATCACATAGCTCAAAAAGCTACTATGCCTGTGTTGGGGAGAGCACTCATGCATATCAGAGCCCTTCAAAAGACCTAACTGCCATCAATAACCGTTTGAATGGCACCCGGAAGGTTAGAGGACCCCTCAACTTTGATGATGTTGATGTTGGGTTGGTCAGTGACTCCATGGTTGCAAACAGTCTCTATCTTCAGAATGGAAGTTGTGCATCCTCGTCAGGAGCACCAGTGAAGTCTGAGCAGCCAGACAGTTGA 3096 0.4228 MSPPAEEKMEDCKAITAPANNSQVHGEHGDPADSRFTEFCKNGLSLDDESCRQAMKLFTETKHLLQTNVSSLGNGTYEEAERFWFSFVLYCVKRLADKHTDSEKKVTDSNGLTLCQILRKAKLNIVDFFKELPQFLVKSGPILSNTYGTDWENRLEAKELHANFLHLSILSKYYKRAFGEFFLANDVIEKNSAVAKTGDYASQYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILAILIIHIPARFRNFNIHDASRFVKKSSKGVDIIASLCNIYDTSEDDVRKNMGKANNLIADILKKKPCLASDCETVTLENIDKDGLFYFNDLMEESSLPSSLDILEKDYDDAIHNEGELDERLFINEEDSLLASGSLSGGSMSASSVKRKFDSLASPAKTITSPLSPQCSPASHANGIPISSNSKMAATPVTTAMTTAKWLRTVICPLPSKPSPELEKFLASCDRDVTNDVVRRTQIILQAIFPSSPLGERCLTGSLQNANLMDNVWAEQRRLEALKLYYRVLEAMCRAEAQILHATNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEDSLPRELRRHLNSLEERLLESMVWEKGSSMYNSLTVARPALSSEITRLGLLAEPMPSLDAIATHINFSCGGLPPGPSLQKPETLPNQNGDIRSPKRLCTEYRSVLAERNSFTSPVKDRLLPFSNLKSKLPPPLQSAFASPTRPNPGGGGETCAETGINIFFGKIVKLAAVRISGMVERLQLSQQIRENVYCLFQQILNQRTSIFFNRHIDQIILCCFYGIAKISQLNLTFREIIFNYRKQPQCKPQVFRGVFIDWSSTRRNGRTGQEHVDIITFYNEIFIPSVKALLVELGPGGTTTKANRIPEANNNSDGHLAQCPGSPKISPFPSLPDMSPKKVSASHNVYVSPLRSAKMDALISHSSKSYYACVGESTHAYQSPSKDLTAINNRLNGTRKVRGPLNFDDVDVGLVSDSMVANSLYLQNGSCASSSGAPVKSEQPDS 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2361 1031 Pfam Retinoblastoma-associated protein B domain 749 876 IPR002719 GO:0005634|GO:0051726
Prci6g2361 1031 Gene3D - 712 900 - -
Prci6g2361 1031 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 33 1029 IPR028309 GO:0006357|GO:0051726
Prci6g2361 1031 SUPERFAMILY Cyclin-like 747 919 IPR036915 -
Prci6g2361 1031 FunFam Retinoblastoma-related protein 1 428 616 - -
Prci6g2361 1031 FunFam Retinoblastoma-related protein 1 700 912 - -
Prci6g2361 1031 SMART RB_A_2 425 626 IPR002720 GO:0005634|GO:0051726
Prci6g2361 1031 Pfam Domain of unknown function (DUF3452) 105 243 IPR024599 -
Prci6g2361 1031 Gene3D - 204 362 - -
Prci6g2361 1031 FunFam Retinoblastoma-related protein 1 204 362 - -
Prci6g2361 1031 CDD CYCLIN_AtRBR_like 749 880 - -
Prci6g2361 1031 Pfam Retinoblastoma-associated protein A domain 425 626 IPR002720 GO:0005634|GO:0051726
Prci6g2361 1031 SMART DUF3452_2 101 243 IPR024599 -
Prci6g2361 1031 Gene3D - 428 616 - -
Prci6g2361 1031 SUPERFAMILY Cyclin-like 433 628 IPR036915 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2361 28 1031 Core Cell Cycle Gene Families AT3G12280 71.203 0.0 1427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Prci6g2361 RB_A 2.4e-64 CL0065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2361 K04681 - qsa:O6P43_029726 1703.72