Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2349 ATGGAGAAAAGGATGTTGACCTTCCCTATTAATGCTCCAAGCAACATTCTCCAATGTTTGGTGGATCTAGTGAAAAACGAAGCTCAATACTTATGTTGTTTGGAGAATCATGTTGAAAATTTTGAGAGAAAAAAGAAAATACTTGCTGCAAAACAACAGGATGTGAAGATAAATATTGAAAATGCTAGTGGTGTTTCAAGAGTTAAGAATGAAGCTCAGCAATGGATACATGAAGCTGATAGTCTTATTGAAGTTGACACAGAAACAAAGAAGAAATGGTTTTTTGGCTTGTGTCCTAATTGCTACCGGCAATACCATAGTGGAAAGGAGTTGGCAAAGAAGACTTTGGAGATTGATGAGCTATTGGGAAGATGTAGTTTCAACATAGTGGGAGGTCCAGTTGATCTTCCAAGCTTAAAATACCATTCATTACCAAGCTTTATTGACTTCGAGAGCAGAAAGTTGAAATTTCAAGATTTGTTGGAGGCATTAGAAGATGAAAATTGCAATTTGATTGGATTGCAAGGCATGGGGGGCACAGGTAAAACCTCAATGGCAATAGAAGTAGGTGTTAAACTTGAAGAATCCAAATATCATAGCGTCATCCTTCTTGATGTGTCTAATCCTCCAGATTTCAAAAAGATTCGTGGTGAAATTGCAAGGCATTTGAATTTAACATTAGAGGAAGGAAAGGAAAAAGAACATTCAAAGACAATATGGTCTAGAATTACTAATAAGAAAGAAAAGCTTCTTATAATACTAGATGATGTATGGGAAGAGTTTGATCTTATAAAAGACATAGGCATTCCATCTAGCCACCAGCACAAGGGTTGTAGTGTATTGATAATTAGTCGTAATTTGAATGTTTGTGAAGTAATGGGTTGTCAAAGGATGATTCAACTAGATATGCTAGTTGATAAGGAAGCATTTAATCTTTTTCTAATACATGCCAATACTTCCTCAAGTCGTTTGAAGGGCATAGCACAAAACATTGTGAAGCAGTGTGGAGGTTTACCAATTGCAATTGTAGCAGTAGCAAGAGCTTTAAGAAATCGACCTTTAGCAATTTGGAGGGAAGCTTTGAAAACCTTGCAAAATTCCAAGTCAATGATTGATGTTAATCAAAATTTGACGAAGATTTATAAATGTTTGAAGTTAAGCTATGATAATCTAAAGAATGAGAAGGCAAAAAAACTCTTTTTGATATGTTCTATTTTCCCAAAAGATTTTGAAATTTCTGTAGAACTTTTGAGTAGAATTGGTATTGGAGTAGGGCTTTTTGGGGAAGTGGAGAAATACTGTACAACAAGAAGCAAAGTGCTTGCGGCTATACAAGAACTTGTGGATTCTTGTTTATTATTGAATCTTCAAGATGGGTTGGTAAAGATGCATGATTTAGTTCGTGAAGTGGCCTTATGGATAGCTGACAAAGACATTCAAGTGATCATGGATTTTAAGACAACTATAGAAGCCAATCTGCGATATTTGTTTTGGAACTCTGAAGACTTTCCCAATCAATTTGATGGCACGAATTTGGAGATTTTTATAATAAATGTAAATGGTTCAGAGGATTTGAAGGTCCCATATTCATTCTTCATAGAGATGACAAAGCTCAGAGTATTGCATTTAAAATGCACTTATGTTCACTCACAAATTTTAGATTCATCATTGTTATACTCACTTCAATCATTAATGAATATCCAAACTCTTTCTTTGATGAATTTGAAATTAGGTGACATTTCTATTTTGGGAAACTTACCTAGTCTTGTGACTCTTGAGTTGAATCATTGTTCAATCATTGAATTATCAGAAGAAATTTTGGGATTAAAGAGGTTGAGATTATTGGAGATAAGAGCATGTAAAGTTAAAATGAACAATCCTTTTGAAGTAATTGAAAGGTGCTCGCAACTAGAAGAGTTGTATTTTGTTGATAATGGGAATTTCATAAATGAAAATATAGATTTTCAAAATTTATCTCCTCTTACATTGCAAAGATATCAAATATCTTCTATTGAACTTCTAGAAGAATTTGAAAAGTATGGTTTAATATCAAGATACTTCTTTCCACATGATTTAAGACCTGTAATCTCAGAGGAAACTTTTAAGCAACTTGTAGGAGCTGCTGAGCTTCTTATATTAGGAGGGTATGATGAAACAAGATGGAAAAATCTTGTCCCTGATATTGTTCATATGGAATGTGGAGGCATGAACGATTTAATTATCCTTCATATGTATTCCTGGCCTGACATACAATGCTTAATTGATACTAGAAATCATTATTTTGATGTGATTGCCTTCTCCAAGTTGATTGAGCTACATCTCTTTGAAATGGATATTGAAGATTTATATCGTGGTTCTCTTCCATCTGGCTTTCTTGAGCAACTAGAGACTATGGAGTTAAAAAGCTGTCTAAAGTTGCAGAACATGTTATTTAATGGCAAGTTAAACCTTTGTCACCTTAAGGCCATGGAATTGAAAGGTTGTGTAGCATTGACATCGATTTTCCAACTATCCACTGCTCGAAGCTTAGTGCTATTGGAAGAATTAACAATTAATGATTGTCATGCACTAGAACACATAGTTTTCGATGACAGCTCAAAAGATGAAATAGTGGGTGATGACAATGGTTATGATCAAAAGAGTCATGACTCATTGTTCCCAAAATTGAAAACTCTTAGAATTGCAAGATGTGACAATTTAGAAATGATATTACCTGTTCTTTTTGCTAGAGGTCTTCCTCCTTTGGAAGTTATAAGCATATGTGAATGTGAGAAATTGAAATACATGTTTAGTCAGTATAGAGAGGAGGACCATGTTTTGCATCAAAATGAACAGGCGGTAATGCTCCCTTTAATGAAAGAAATGAAGCTCTCTAGAGTTCCAAGTTTTATTGACATTTATCGAGAACATTGCAAACTCATGTCTTCATCAATGCAAGGGTCATCATCTTCAGTTCCAACAGATATTGCCAATGAGACACTTCTGAATCCTAATGCACATGCTTGCTCTTGGGCTCCTATATGCTGTTTTCCACATGAATCTAAGGCCACAAGCGAAGAGACTAAGGCCAGTGCTACTATTTCTAAGGAGGAGAAATTGGCTGACCTGACAACCCCCCTGGGATTATATAATACAGCTCAATGCATTACGAGACAATTGTTCCACTTTCGTAATATCAAGAAGATGAAACTTGTAAACTTTCCAAATTTATTATCATTGTTCTCCCTGTCCATTGCATCAATGATAATGTGGGAAGAATTGACAATTGAAAAGTGGGATGATTTAAAGCACATGATAACAAATGATGTAGATGATCGTAATGATCAGATCACCTATAAGTCCATTTTCCCAAAATTAGAGAAGTTGGAAATTTGGGATTGCAAGGATTTAGAATTTTTATTTCCATCCACATTATTTGGAGGACTAAAAAATTTAAAATTTTTGACTATCAAGAATGCTCCTGAGCTTAAATATATTTTTGGGAAATACCCTCTTGAGGATCATTTGTTAAATTTGAATCAAAACGATGAGCTTCAATTTGATCTCCCAGCTTTGGAGGTCCTTTGCCTTGGAGATGTACAAAAGATCATTAGCATTTGTGCCATGAATTATTACTTGACATGGCCGTCTCTACATATGGTTGTTCTAGAGAATTGCAACATTGAATCTTTCACTGATTTGATGGTTTGTTCAGATGAAGGACGATTGAAGTGGAAAGCTATGAAGGAATTAGATGCATCAAGAGGTGGGATTCCTCCTTTTCAAGCATCTCAAAATCCTTTGCTTCAACCACTGAACAATATTAGAACAATGAGACTTGTGAGTTGTTCACGCTTAGTATCATTGCTAGCTCTACCCATTGCATCAAAGATTTTATTGGAAGTTTTGATAATTGAAGAATGTCATGAACTGAAGTGCATAGTAGCAGATGAGGAAGACGCTCAAGCTCTCATGAACTTCAATTCTATATTCTCAAAGTTGAAAGAGTTACATGTTTCAAGATGCCGTACACTAGAATATTTATTTCCAGCATCTTTGTTTAGATCTCCCACACATTTGAAATATGTGACCATCGCTCATGCTCCTAAGTTGAAATATGTGTTTGGAACGAGCCATCATGAAGATTCATCTCATGAGAGTCAAAATATTGAGGCTTATATTGATTTCCCAGTTTTAGAAAGCTTAAACCTTGAAGTTATACCAAATCTTGTCAGCATTTTCCCTCAAAACTACTATTTGACAGGGCTGTCTCTAAAGTCTATTGTTTTGGATATGTCTCCTGAGTTTATTATTAAATCTTTTACTGATTTCATGAGTGGTCGGCATGCAAGTCAATGTGATTCCACAACCTCAAAGGTAATTGAGAATCGCATACAAACTATGACAGATCTTACAGTACATTACTCCAATGTAGAAGACATTTTTAATTTGGCACAGTCGAAGGTTGAGAGAAATAGGGAAGGACTTGAACCAGTGACATCAAGCTTAGAATACTTGACTTTGGGAAACCTTAGTGAGTTAAGGAATATATGTGAGGGCCCAAAATATATTTTAAGCCTCAACAATCTTAAGAAACTAAATATTACATCATGCAAAAAGCTTAAAACTGTCTTCTCTATCTCCATATTGAAAAGTCTGCCTGAGTTGTGGAAGCTAGAGATATCTGACTGTGAAGAACTAGTTCACATTGTTGGAGAGGATATTGAGGAAAATGCTAGTGATCGTTTGTCTCATGAGCCATGCTTTCCGAAATTACATGAACTGCATGTTAAGTCTTGTAACATGTTGAAATACCTGTTCTCTATCTCAATGTCTGGTATACTTCCCAACCTTATGTTTTTGAGCATAAAAGAAGCCTCCAAGCTTAAACATGTAATTATTTCACATGTTGAGATGAAAGAGATGGTGATGACAGATGTGCTTCCAGAGCTATATTATCTGATTTTTGAGGAACTTCCTAGTCTTGTTGATGTTTGCCATGGGATTGATTTTCAAGCTGTACGCATATCTTCTGAAGTATATAATTGTCCTAATTTTTCTTTTTATGAAAATAGTACTACACATCTTCAAGTTGGCCTTGAAAATCTAGATTCTAAAGTTCAGGTGGCAAAAGACGAGAATCTTTCTTCGCATCTCAATACCCATCAATTTGGTATGAGAAAAGCTGAAGGGAGCCAAGACTTGGAAACACAACAATCTTCAATTGGCTCACCAAACTTAACAAGGGTTGTCGAAGTGACACCTAAAGAAGGGCCATCATCAAATACCTCACATCCTTGCCCCTTGGATTCTACAAAGCCAATGGCATTGGTTCCTATGAGTCCCATTCTCATTGCCCTTCCTACTGAAGGCAGTTCTTTTACAATCATAGAAATTTTTGAAGAGGAAGAAGAAGAGGAAGAGGAAGGTGGTTTGATAACTATCTGCCGTTGCCAACGGGGCATAAAGGAGGTGAGTTCTTTGATACCAGAGGGTCCACAAATCACTTGTAGAGGGGCTCCTTTACCTCTCATCAATGCTCCTTTGCTTGAGACTTCTATTCAGGAGGGAAGTGATCAAGATGATGTTGGAACTACTAACCAGTTGATTCGAGAAGCTGTTGATACTATTCAAGTTTCTAAGAACTCTAATGCACTTGCTATTGTCCCGAGCAAGGATGGTAATGTTGAAACCATTGGGCCCCTCACCACTTTTTTTGAGCATGCCAGTGATGGGATCACTGAGGAAGTGAGTCTAGTTCAAAATGAATGTGAGGTAAATTCTTCGTGCTTTGATGACGATGAGATCACTAGAGAGAGTGATGCTTCTAGTTTTGATGAACTATTGAGGGATGATACTAGTGAGCACGGTGGCCAAGTAAATAGAAGTGGGGATTTTGGTGCTAGTCTAAGTGCCTTGGAAGGAAGAGAACGAGAGTCTTCCTATTCTAAAGGTCGACCTATTAAATATGGCATGAAAAAGTCAGATGTTCAGGTTTTACCACCACAGTTGCCTTCACCTTCACCTCTTTCTTCTTCTCTAGAGACGACGCCTCCTTTCTCCATGACTGATTATGTTTTAACTGTTCCTGGGGTGCAAGAGATAGTTAATATGATGAATTTAGAGGGTGTTGAGCCTTTCTTGCTTGCAAAGGTGTTTAAGAGTCACCCACAGCTACGTCTTCCTACAGAGAATCGAAGCACTCGAATTTTGTTCTTTTCCTATAGAGTGTTGTTGGATATCTTGAACATTTTGGCCACTAGAACTCCCTTATCAATCACTGAGTCAGACAAGAGGTTATTGGCAGAAAACTTGGAGGATGCTTCTACCCTTGGTTTTGACAACAATTGGCTAGAGTCTATCAAGACCAAGGTATTTGGTTGTGATATATCTGAAGCTCATCATGCCCTAGAGCTTCTGAAAGGATTGGATAATAAGCTCAATGCCATTGAAAAAGAGCTTACAACTATCTGTGAGCAGGAAGAAGAGGCTGCTTTAGCCGTGCAAGTGGCTCAAAAGGAGTTAGAGGCAGCCCAAATCCATCTTGACTCAGCACAACTCGAACATGCTAATGTTAAGACACGTCATAGCCAGCTCTTGGAGGCACAACAACACATTTTGGCTCAACAAGATGAATGTTGGGAAGCCATTGCTGCTAAAGATAAGCATTTTGATTTATAA 6660 0.368 MEKRMLTFPINAPSNILQCLVDLVKNEAQYLCCLENHVENFERKKKILAAKQQDVKINIENASGVSRVKNEAQQWIHEADSLIEVDTETKKKWFFGLCPNCYRQYHSGKELAKKTLEIDELLGRCSFNIVGGPVDLPSLKYHSLPSFIDFESRKLKFQDLLEALEDENCNLIGLQGMGGTGKTSMAIEVGVKLEESKYHSVILLDVSNPPDFKKIRGEIARHLNLTLEEGKEKEHSKTIWSRITNKKEKLLIILDDVWEEFDLIKDIGIPSSHQHKGCSVLIISRNLNVCEVMGCQRMIQLDMLVDKEAFNLFLIHANTSSSRLKGIAQNIVKQCGGLPIAIVAVARALRNRPLAIWREALKTLQNSKSMIDVNQNLTKIYKCLKLSYDNLKNEKAKKLFLICSIFPKDFEISVELLSRIGIGVGLFGEVEKYCTTRSKVLAAIQELVDSCLLLNLQDGLVKMHDLVREVALWIADKDIQVIMDFKTTIEANLRYLFWNSEDFPNQFDGTNLEIFIINVNGSEDLKVPYSFFIEMTKLRVLHLKCTYVHSQILDSSLLYSLQSLMNIQTLSLMNLKLGDISILGNLPSLVTLELNHCSIIELSEEILGLKRLRLLEIRACKVKMNNPFEVIERCSQLEELYFVDNGNFINENIDFQNLSPLTLQRYQISSIELLEEFEKYGLISRYFFPHDLRPVISEETFKQLVGAAELLILGGYDETRWKNLVPDIVHMECGGMNDLIILHMYSWPDIQCLIDTRNHYFDVIAFSKLIELHLFEMDIEDLYRGSLPSGFLEQLETMELKSCLKLQNMLFNGKLNLCHLKAMELKGCVALTSIFQLSTARSLVLLEELTINDCHALEHIVFDDSSKDEIVGDDNGYDQKSHDSLFPKLKTLRIARCDNLEMILPVLFARGLPPLEVISICECEKLKYMFSQYREEDHVLHQNEQAVMLPLMKEMKLSRVPSFIDIYREHCKLMSSSMQGSSSSVPTDIANETLLNPNAHACSWAPICCFPHESKATSEETKASATISKEEKLADLTTPLGLYNTAQCITRQLFHFRNIKKMKLVNFPNLLSLFSLSIASMIMWEELTIEKWDDLKHMITNDVDDRNDQITYKSIFPKLEKLEIWDCKDLEFLFPSTLFGGLKNLKFLTIKNAPELKYIFGKYPLEDHLLNLNQNDELQFDLPALEVLCLGDVQKIISICAMNYYLTWPSLHMVVLENCNIESFTDLMVCSDEGRLKWKAMKELDASRGGIPPFQASQNPLLQPLNNIRTMRLVSCSRLVSLLALPIASKILLEVLIIEECHELKCIVADEEDAQALMNFNSIFSKLKELHVSRCRTLEYLFPASLFRSPTHLKYVTIAHAPKLKYVFGTSHHEDSSHESQNIEAYIDFPVLESLNLEVIPNLVSIFPQNYYLTGLSLKSIVLDMSPEFIIKSFTDFMSGRHASQCDSTTSKVIENRIQTMTDLTVHYSNVEDIFNLAQSKVERNREGLEPVTSSLEYLTLGNLSELRNICEGPKYILSLNNLKKLNITSCKKLKTVFSISILKSLPELWKLEISDCEELVHIVGEDIEENASDRLSHEPCFPKLHELHVKSCNMLKYLFSISMSGILPNLMFLSIKEASKLKHVIISHVEMKEMVMTDVLPELYYLIFEELPSLVDVCHGIDFQAVRISSEVYNCPNFSFYENSTTHLQVGLENLDSKVQVAKDENLSSHLNTHQFGMRKAEGSQDLETQQSSIGSPNLTRVVEVTPKEGPSSNTSHPCPLDSTKPMALVPMSPILIALPTEGSSFTIIEIFEEEEEEEEEGGLITICRCQRGIKEVSSLIPEGPQITCRGAPLPLINAPLLETSIQEGSDQDDVGTTNQLIREAVDTIQVSKNSNALAIVPSKDGNVETIGPLTTFFEHASDGITEEVSLVQNECEVNSSCFDDDEITRESDASSFDELLRDDTSEHGGQVNRSGDFGASLSALEGRERESSYSKGRPIKYGMKKSDVQVLPPQLPSPSPLSSSLETTPPFSMTDYVLTVPGVQEIVNMMNLEGVEPFLLAKVFKSHPQLRLPTENRSTRILFFSYRVLLDILNILATRTPLSITESDKRLLAENLEDASTLGFDNNWLESIKTKVFGCDISEAHHALELLKGLDNKLNAIEKELTTICEQEEEAALAVQVAQKELEAAQIHLDSAQLEHANVKTRHSQLLEAQQHILAQQDECWEAIAAKDKHFDL 2219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2349 2219 MobiDBLite consensus disorder prediction 1945 2009 - -
Prci6g2349 2219 Gene3D Ribonuclease Inhibitor 732 947 IPR032675 -
Prci6g2349 2219 Gene3D Ribonuclease Inhibitor 1040 1163 IPR032675 -
Prci6g2349 2219 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1469 1598 - -
Prci6g2349 2219 SUPERFAMILY L domain-like 461 932 - -
Prci6g2349 2219 SUPERFAMILY RNI-like 1261 1416 - -
Prci6g2349 2219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 403 IPR027417 -
Prci6g2349 2219 Coils Coil 2161 2181 - -
Prci6g2349 2219 Gene3D Ribonuclease Inhibitor 1165 1428 IPR032675 -
Prci6g2349 2219 Coils Coil 374 394 - -
Prci6g2349 2219 PRINTS Disease resistance protein signature 171 186 - -
Prci6g2349 2219 PRINTS Disease resistance protein signature 244 258 - -
Prci6g2349 2219 PRINTS Disease resistance protein signature 584 600 - -
Prci6g2349 2219 PRINTS Disease resistance protein signature 335 349 - -
Prci6g2349 2219 Gene3D - 304 392 IPR042197 -
Prci6g2349 2219 SUPERFAMILY RNI-like 1491 1648 - -
Prci6g2349 2219 Gene3D Ribonuclease Inhibitor 1454 1698 IPR032675 -
Prci6g2349 2219 Pfam NB-ARC domain 160 390 IPR002182 GO:0043531
Prci6g2349 2219 Gene3D - 139 302 IPR027417 -
Prci6g2349 2219 Coils Coil 2126 2153 - -
Prci6g2349 2219 Gene3D Ribonuclease Inhibitor 444 684 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2349 Prci-Chr6 34291744 34306951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2349 172 570 WRKY Transcription Factor Family AT5G45050 24.122 2.46e-08 57.8