Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2348 ATGGAGAAAAGGATGTTGACCTTCCCTATTAATGCTCCAAGCAACATTCTCCAATGTTTGGTGGATCTAGTGAAAAACGAAGCTCAATACTTATGTTGTTTGGAGAATCATGTTGAAAATTTTGAGAGAAAAAAGAAAATACTTGCTGCAAAACAACAGGATGTGAAGATAAATATTGAAAATGCTAGTGGTGTTTCAAGAGTTAAGAATGAAGCTCAGCAATGGATACATGAAGCTGATAGTCTTATTGAAGTTGACACAGAAACAAAGAAGAAATGGTTTTTTGGCTTGTGTCCTAATTGCTACCGGCAATACCATAGTGGAAAGGAGTTGGCAAAGAAGACTTTGGAGATTGATGAGCTATTGGGAAGATGTAGTTTCAACATAGTGGGAGGTCCAGTTGATCTTCCAAGCTTAAAATACCATTCATTACCAAGCTTTATTGACTTCGAGAGCAGAAAGTTGAAATTTCAAGATTTGTTGGAGGCATTAGAAGATGAAAATTGCAATTTGATTGGATTGCAAGGCATGGGGGGCACAGGTAAAACCTCAATGGCAATAGAAGTAGGTGTTAAACTTGAAGAATCCAAATATCATAGCGTCATCCTTCTTGATGTGTCTAATCCTCCAGATTTCAAAAAGATTCGTGGTGAAATTGCAAGGCATTTGAATTTAACATTAGAGGAAGGAAAGGAAAAAGAACATTCAAAGACAATATGGTCTAGAATTACTAATAAGAAAGAAAAGCTTCTTATAATACTAGATGATGTATGGGAAGAGTTTGATCTTATAAAAGACATAGGCATTCCATCTAGCCACCAGCACAAGGGTTGTAGTGTATTGATAATTAGTCGTAATTTGAATGTTTGTGAAGTAATGGGTTGTCAAAGGATGATTCAACTAGATATGCTAGTTGATAAGGAAGCATTTAATCTTTTTCTAATACATGCCAATACTTCCTCAAGTCGTTTGAAGGGCATAGCACAAAACATTGTGAAGCAGTGTGGAGGTTTACCAATTGCAATTGTAGCAGTAGCAAGAGCTTTAAGAAATCGACCTTTAGCAATTTGGAGGGAAGCTTTGAAAACCTTGCAAAATTCCAAGTCAATGATTGATGTTAATCAAAATTTGACGAAGATTTATAAATGTTTGAAGTTAAGCTATGATAATCTAAAGAATGAGAAGGCAAAAAAACTCTTTTTGATATGTTCTATTTTCCCAAAAGATTTTGAAATTTCTGTAGAACTTTTGAGTAGAATTGGTATTGGAGTAGGGCTTTTTGGGGAAGTGGAGAAATACTGTACAACAAGAAGCAAAGTGCTTGCGGCTATACAAGAACTTGTGGATTCTTGTTTATTATTGAATCTTCAAGATGGGTTGGTAAAGATGCATGATTTAGTTCGTGAAGTGGCCTTATGGATAGCTGACAAAGACATTCAAGTGATCATGGATTTTAAGACAACTATAGAAGCCAATCTGCGATATTTGTTTTGGAACTCTGAAGACTTTCCCAATCAATTTGATGGCACGAATTTGGAGATTTTTATAATAAATGTAAATGGTTCAGAGGATTTGAAGGTCCCATATTCATTCTTCATAGAGATGACAAAGCTCAGAGTATTGCATTTAAAATGCACTTATGTTCACTCACAAATTTTAGATTCATCATTGTTATACTCACTTCAATCATTAATGAATATCCAAACTCTTTCTTTGATGAATTTGAAATTAGGTGACATTTCTATTTTGGGAAACTTACCTAGTCTTGTGACTCTTGAGTTGAATCATTGTTCAATCATTGAATTATCAGAAGAAATTTTGGGATTAAAGAGGTTGAGATTATTGGAGATAAGAGCATGTAAAGTTAAAATGAACAATCCTTTTGAAGTAATTGAAAGGTGCTCGCAACTAGAAGAGTTGTATTTTGTTGATAATGGGAATTTCATAAATGAAAATATAGATTTTCAAAATTTATCTCCTCTTACATTGCAAAGATATCAAATATCTTCTATTGAACTTCTAGAAGAATTTGAAAAGTATGGTTTAATATCAAGATACTTCTTTCCACATGATTTAAGACCTGTAATCTCAGAGGAAACTTTTAAGCAACTTGTAGGAGCTGCTGAGCTTCTTATATTAGGAGGGTATGATGAAACAAGATGGAAAAATCTTGTCCCTGATATTGTTCATATGGAATGTGGAGGCATGAACGATTTAATTATCCTTCATATGTATTCCTGGCCTGACATACAATGCTTAATTGATACTAGAAATCATTATTTTGATGTGATTGCCTTCTCCAAGTTGATTGAGCTACATCTCTTTGAAATGGATATTGAAGATTTATATCGTGGTTCTCTTCCATCTGGCTTTCTTGAGCAACTAGAGACTATGGAGTTAAAAAGCTGTCTAAAGTTGCAGAACATGTTATTTAATGGCAAGTTAAACCTTTGTCACCTTAAGGCCATGGAATTGAAAGGTTGTGTAGCATTGACATCGATTTTCCAACTATCCACTGCTCGAAGCTTAGTGCTATTGGAAGAATTAACAATTAATGATTGTCATGCACTAGAACACATAGTTTTCGATGACAGCTCAAAAGATGAAATAGTGGGTGATGACAATGGTTATGATCAAAAGAGTCATGACTCATTGTTCCCAAAATTGAAAACTCTTAGAATTGCAAGATGTGACAATTTAGAAATGATATTACCTGTTCTTTTTGCTAGAGGTCTTCCTCCTTTGGAAGTTATAAGCATATGTGAATGTGAGAAATTGAAATACATGTTTAGTCAGTATAGAGAGGAGGACCATGTTTTGCATCAAAATGAACAGGCGGTAATGCTCCCTTTAATGAAAGAAATGAAGCTCTCTAGAGTTCCAAGTTTTATTGACATTTATCGAGAACATTGCAAACTCATGTCTTCATCAATGCAAGGGTCATCATCTTCAGTTCCAACAGATATTGCCAATGAGACACTTCTGAATCCTAATGCACATGCTTGCTCTTGGGCTCCTATATGCTGTTTTCCACATGAATCTAAGGCCACAAGCGAAGAGACTAAGGCCAGTGCTACTATTTCTAAGGAGGAGAAATTGGCTGACCTGACAACCCCCCTGGGATTATATAATACAGCTCAATGCATTACGAGACAATTGTTCCACTTTCGTAATATCAAGAAGATGAAACTTGTAAACTTTCCAAATTTATTATCATTGTTCTCCCTGTCCATTGCATCAATGATAATGTGGGAAGAATTGACAATTGAAAAGTGGGATGATTTAAAGCACATGATAACAAATGATGTAGATGATCGTAATGATCAGATCACCTATAAGTCCATTTTCCCAAAATTAGAGAAGTTGGAAATTTGGGATTGCAAGGATTTAGAATTTTTATTTCCATCCACATTATTTGGAGGACTAAAAAATTTAAAATTTTTGACTATCAAGAATGCTCCTGAGCTTAAATATATTTTTGGGAAATACCCTCTTGAGGATCATTTGTTAAATTTGAATCAAAACGATGAGCTTCAATTTGATCTCCCAGCTTTGGAGGTCCTTTGCCTTGGAGATGTACAAAAGATCATTAGCATTTGTGCCATGAATTATTACTTGACATGGCCGTCTCTACATATGGTTGTTCTAGAGAATTGCAACATTGAATCTTTCACTGATTTGATGGTTTGTTCAGATGAAGGACGATTGAAGTGGAAAGCTATGAAGGAATTAGATGCATCAAGAGGTGGGATTCCTCCTTTTCAAGCATCTCAAAATCCTTTGCTTCAACCACTGAACAATATTAGAACAATGAGACTTGTGAGTTGTTCACGCTTAGTATCATTGCTAGCTCTACCCATTGCATCAAAGATTTTATTGGAAGTTTTGATAATTGAAGAATGTCATGAACTGAAGTGCATAGTAGCAGATGAGGAAGACGCTCAAGCTCTCATGAACTTCAATTCTATATTCTCAAAGTTGAAAGAGTTACATGTTTCAAGATGCCGTACACTAGAATATTTATTTCCAGCATCTTTGTTTAGATCTCCCACACATTTGAAATATGTGACCATCGCTCATGCTCCTAAGTTGAAATATGTGTTTGGAACGAGCCATCATGAAGATTCATCTCATGAGAGTCAAAATATTGAGGCTTATATTGATTTCCCAGTTTTAGAAAGCTTAAACCTTGAAGTTATACCAAATCTTGTCAGCATTTTCCCTCAAAACTACTATTTGACAGGGCTGTCTCTAAAGTCTATTGTTTTGGATATGTCTCCTGAGTTTATTATTAAATCTTTTACTGATTTCATGAGTGGTCGGCATGCAAGTCAATGTGATTCCACAACCTCAAAGGTAATTGAGAATCGCATACAAACTATGACAGATCTTACAGTACATTACTCCAATGTAGAAGACATTTTTAATTTGGCACAGTCGAAGGTTGAGAGAAATAGGGAAGGACTTGAACCAGTGACATCAAGCTTAGAATACTTGACTTTGGGAAACCTTAGTGAGTTAAGGAATATATGTGAGGGCCCAAAATATATTTTAAGCCTCAACAATCTTAAGAAACTAAATATTACATCATGCAAAAAGCTTAAAACTGTCTTCTCTATCTCCATATTGAAAAGTCTGCCTGAGTTGTGGAAGCTAGAGATATCTGACTGTGAAGAACTAGTTCACATTGTTGGAGAGGATATTGAGGAAAATGCTAGTGATCGTTTGTCTCATGAGCCATGCTTTCCGAAATTACATGAACTGCATGTTAAGTCTTGTAACATGTTGAAATACCTGTTCTCTATCTCAATGTCTGGTATACTTCCCAACCTTATGTTTTTGAGCATAAAAGAAGCCTCCAAGCTTAAACATGTAATTATTTCACATGTTGAGATGAAAGAGATGGTGATGACAGATGTGCTTCCAGAGCTATATTATCTGATTTTTGAGGAACTTCCTAGTCTTGTTGATGTTTGCCATGGGATTGATTTTCAAGCTGTACGCATATCTTCTGAAGTATATAATTGTCCTAATTTTTCTTTTTATGAAAATAGTACTACACATCTTCAAGTTGGCCTTGAAAATCTAGATTCTAAAGTTCAGGTGGCAAAAGACGAGAATCTTTCTTCGCATCTCAATACCCATCAATTTGGTATGAGAAAAGCTGAAGGGAGCCAAGACTTGGAAACACAACAATCTTCAATTGGCTCACCAAACTTAACAAGGGTTGTCGAAGTGACACCTAAAGAAGGGCCATCATCAAATACCTCACATCCTTGCCCCTTGGATTCTACAAAGCCAATGGCATTGGTTCCTATGAGTCCCATTCTCATTGCCCTTCCTACTGAAGGCAGTTCTTTTACAATCATAGAAATTTTTGAAGAGGAAGAAGAAGAGGAAGAGGAAGGTGGTTTGATAACTATCTGCCGTTGCCAACGGGGCATAAAGGAGGTGAGTTCTTTGATACCAGAGGGTCCACAAATCACTTGTAGAGGGGCTCCTTTACCTCTCATCAATGCTCCTTTGCTTGAGACTTCTATTCAGGCTTTGCTTCATTCAGAGGGAAGTGATCAAGATGATGTTGGAACTACTAACCAGTTGATTCGAGAAGCTGTTGATACTATTCAAGTTTCTAAGAACTCTAATGCACTTGCTATTGTCCCGAGCAAGGATGGTAATGTTGAAACCATTGGGCCCCTCACCACTTTTTTTGAGCATGCCAGTGATGGGATCACTGAGGAAGTGAGTCTAGTTCAAAATGAATGTGAGGTAAATTCTTCGTGCTTTGATGACGATGAGATCACTAGAGAGAGTGATGCTTCTAGTTTTGATGAACTATTGAGGGATGATACTAGTGAGCACGGTGGCCAAGTAAATAGAAGTGGGGATTTTGGTGCTAGTCTAAGTGCCTTGGAAGGAAGAGAACGAGAGTCTTCCTATTCTAAAGAGACGACGCCTCCTTTCTCCATGACTGATTATGTTTTAACTGTTCCTGGGGTGCAAGAGATAGTTAATATGATGAATTTAGAGGGTGTTGAGCCTTTCTTGCTTGCAAAGGTGTTTAAGAGTCACCCACAGCTACGTCTTCCTACAGAGAATCGAAGCACTCGAATTTTGTTCTTTTCCTATAGAGTGTTGTTGGATATCTTGAACATTTTGGCCACTAGAACTCCCTTATCAATCACTGAGTCAGACAAGAGGTTATTGGCAGAAAACTTGGAGGATGCTTCTACCCTTGGTTTTGACAACAATTGGCTAGAGTCTATCAAGACCAAGGTATTTGGTTGTGATATATCTGAAGCTCATCATGCCCTAGAGCTTCTGAAAGGATTGGATAATAAGCTCAATGCCATTGAAAAAGAGCTTACAACTATCTGTGAGCAGGAAGAAGAGGCTGCTTTAGCCGTGCAAGTGGCTCAAAAGGAGTTAGAGGCAGCCCAAATCCATCTTGACTCAGCACAACTCGAACATGCTAATGTTAAGACACGTCATAGCCAGCTCTTGGAGGCACAACAACACATTTTGGCTCAACAAGATGAATGTTGGGAAGCCATTGCTGCTAAAGATAAGCATTTTGATTTATAA 6585 0.3675 MEKRMLTFPINAPSNILQCLVDLVKNEAQYLCCLENHVENFERKKKILAAKQQDVKINIENASGVSRVKNEAQQWIHEADSLIEVDTETKKKWFFGLCPNCYRQYHSGKELAKKTLEIDELLGRCSFNIVGGPVDLPSLKYHSLPSFIDFESRKLKFQDLLEALEDENCNLIGLQGMGGTGKTSMAIEVGVKLEESKYHSVILLDVSNPPDFKKIRGEIARHLNLTLEEGKEKEHSKTIWSRITNKKEKLLIILDDVWEEFDLIKDIGIPSSHQHKGCSVLIISRNLNVCEVMGCQRMIQLDMLVDKEAFNLFLIHANTSSSRLKGIAQNIVKQCGGLPIAIVAVARALRNRPLAIWREALKTLQNSKSMIDVNQNLTKIYKCLKLSYDNLKNEKAKKLFLICSIFPKDFEISVELLSRIGIGVGLFGEVEKYCTTRSKVLAAIQELVDSCLLLNLQDGLVKMHDLVREVALWIADKDIQVIMDFKTTIEANLRYLFWNSEDFPNQFDGTNLEIFIINVNGSEDLKVPYSFFIEMTKLRVLHLKCTYVHSQILDSSLLYSLQSLMNIQTLSLMNLKLGDISILGNLPSLVTLELNHCSIIELSEEILGLKRLRLLEIRACKVKMNNPFEVIERCSQLEELYFVDNGNFINENIDFQNLSPLTLQRYQISSIELLEEFEKYGLISRYFFPHDLRPVISEETFKQLVGAAELLILGGYDETRWKNLVPDIVHMECGGMNDLIILHMYSWPDIQCLIDTRNHYFDVIAFSKLIELHLFEMDIEDLYRGSLPSGFLEQLETMELKSCLKLQNMLFNGKLNLCHLKAMELKGCVALTSIFQLSTARSLVLLEELTINDCHALEHIVFDDSSKDEIVGDDNGYDQKSHDSLFPKLKTLRIARCDNLEMILPVLFARGLPPLEVISICECEKLKYMFSQYREEDHVLHQNEQAVMLPLMKEMKLSRVPSFIDIYREHCKLMSSSMQGSSSSVPTDIANETLLNPNAHACSWAPICCFPHESKATSEETKASATISKEEKLADLTTPLGLYNTAQCITRQLFHFRNIKKMKLVNFPNLLSLFSLSIASMIMWEELTIEKWDDLKHMITNDVDDRNDQITYKSIFPKLEKLEIWDCKDLEFLFPSTLFGGLKNLKFLTIKNAPELKYIFGKYPLEDHLLNLNQNDELQFDLPALEVLCLGDVQKIISICAMNYYLTWPSLHMVVLENCNIESFTDLMVCSDEGRLKWKAMKELDASRGGIPPFQASQNPLLQPLNNIRTMRLVSCSRLVSLLALPIASKILLEVLIIEECHELKCIVADEEDAQALMNFNSIFSKLKELHVSRCRTLEYLFPASLFRSPTHLKYVTIAHAPKLKYVFGTSHHEDSSHESQNIEAYIDFPVLESLNLEVIPNLVSIFPQNYYLTGLSLKSIVLDMSPEFIIKSFTDFMSGRHASQCDSTTSKVIENRIQTMTDLTVHYSNVEDIFNLAQSKVERNREGLEPVTSSLEYLTLGNLSELRNICEGPKYILSLNNLKKLNITSCKKLKTVFSISILKSLPELWKLEISDCEELVHIVGEDIEENASDRLSHEPCFPKLHELHVKSCNMLKYLFSISMSGILPNLMFLSIKEASKLKHVIISHVEMKEMVMTDVLPELYYLIFEELPSLVDVCHGIDFQAVRISSEVYNCPNFSFYENSTTHLQVGLENLDSKVQVAKDENLSSHLNTHQFGMRKAEGSQDLETQQSSIGSPNLTRVVEVTPKEGPSSNTSHPCPLDSTKPMALVPMSPILIALPTEGSSFTIIEIFEEEEEEEEEGGLITICRCQRGIKEVSSLIPEGPQITCRGAPLPLINAPLLETSIQALLHSEGSDQDDVGTTNQLIREAVDTIQVSKNSNALAIVPSKDGNVETIGPLTTFFEHASDGITEEVSLVQNECEVNSSCFDDDEITRESDASSFDELLRDDTSEHGGQVNRSGDFGASLSALEGRERESSYSKETTPPFSMTDYVLTVPGVQEIVNMMNLEGVEPFLLAKVFKSHPQLRLPTENRSTRILFFSYRVLLDILNILATRTPLSITESDKRLLAENLEDASTLGFDNNWLESIKTKVFGCDISEAHHALELLKGLDNKLNAIEKELTTICEQEEEAALAVQVAQKELEAAQIHLDSAQLEHANVKTRHSQLLEAQQHILAQQDECWEAIAAKDKHFDL 2194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2348 2194 Gene3D - 139 302 IPR027417 -
Prci6g2348 2194 Coils Coil 2136 2156 - -
Prci6g2348 2194 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1470 1598 - -
Prci6g2348 2194 Gene3D Ribonuclease Inhibitor 444 684 IPR032675 -
Prci6g2348 2194 Gene3D - 304 392 IPR042197 -
Prci6g2348 2194 Gene3D Ribonuclease Inhibitor 1388 1639 IPR032675 -
Prci6g2348 2194 Gene3D Ribonuclease Inhibitor 732 946 IPR032675 -
Prci6g2348 2194 Gene3D Ribonuclease Inhibitor 1040 1164 IPR032675 -
Prci6g2348 2194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 403 IPR027417 -
Prci6g2348 2194 Coils Coil 374 394 - -
Prci6g2348 2194 Gene3D Ribonuclease Inhibitor 1165 1370 IPR032675 -
Prci6g2348 2194 Coils Coil 2101 2128 - -
Prci6g2348 2194 SUPERFAMILY L domain-like 462 1356 - -
Prci6g2348 2194 SUPERFAMILY RNI-like 1491 1648 - -
Prci6g2348 2194 PRINTS Disease resistance protein signature 244 258 - -
Prci6g2348 2194 PRINTS Disease resistance protein signature 584 600 - -
Prci6g2348 2194 PRINTS Disease resistance protein signature 335 349 - -
Prci6g2348 2194 PRINTS Disease resistance protein signature 171 186 - -
Prci6g2348 2194 Pfam NB-ARC domain 160 390 IPR002182 GO:0043531
Prci6g2348 2194 SUPERFAMILY L domain-like 748 932 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2348 Prci-Chr6 34291744 34306954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2348 172 570 WRKY Transcription Factor Family AT5G45050 24.122 3.46e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2348 - - pcin:129313598 4268