Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2347 ATGGAGAAAAGGATGTTGACCTTCCCTATTAATGCTCCAAGCAACATTCTCCAATGTTTGGTGGATCTAGTGAAAAACGAAGCTCAATACTTATGTTGTTTGGAGAATCATGTTGAAAATTTTGAGAGAAAAAAGAAAATACTTGCTGCAAAACAACAGGATGTGAAGATAAATATTGAAAATGCTAGTGGTGTTTCAAGAGTTAAGAATGAAGCTCAGCAATGGATACATGAAGCTGATAGTCTTATTGAAGTTGACACAGAAACAAAGAAGAAATGGTTTTTTGGCTTGTGTCCTAATTGCTACCGGCAATACCATAGTGGAAAGGAGTTGGCAAAGAAGACTTTGGAGATTGATGAGCTATTGGGAAGATGTAGTTTCAACATAGTGGGAGGTCCAGTTGATCTTCCAAGCTTAAAATACCATTCATTACCAAGCTTTATTGACTTCGAGAGCAGAAAGTTGAAATTTCAAGATTTGTTGGAGGCATTAGAAGATGAAAATTGCAATTTGATTGGATTGCAAGGCATGGGGGGCACAGGTAAAACCTCAATGGCAATAGAAGTAGGTGTTAAACTTGAAGAATCCAAATATCATAGCGTCATCCTTCTTGATGTGTCTAATCCTCCAGATTTCAAAAAGATTCGTGGTGAAATTGCAAGGCATTTGAATTTAACATTAGAGGAAGGAAAGGAAAAAGAACATTCAAAGACAATATGGTCTAGAATTACTAATAAGAAAGAAAAGCTTCTTATAATACTAGATGATGTATGGGAAGAGTTTGATCTTATAAAAGACATAGGCATTCCATCTAGCCACCAGCACAAGGGTTGTAGTGTATTGATAATTAGTCGTAATTTGAATGTTTGTGAAGTAATGGGTTGTCAAAGGATGATTCAACTAGATATGCTAGTTGATAAGGAAGCATTTAATCTTTTTCTAATACATGCCAATACTTCCTCAAGTCGTTTGAAGGGCATAGCACAAAACATTGTGAAGCAGTGTGGAGGTTTACCAATTGCAATTGTAGCAGTAGCAAGAGCTTTAAGAAATCGACCTTTAGCAATTTGGAGGGAAGCTTTGAAAACCTTGCAAAATTCCAAGTCAATGATTGATGTTAATCAAAATTTGACGAAGATTTATAAATGTTTGAAGTTAAGCTATGATAATCTAAAGAATGAGAAGGCAAAAAAACTCTTTTTGATATGTTCTATTTTCCCAAAAGATTTTGAAATTTCTGTAGAACTTTTGAGTAGAATTGGTATTGGAGTAGGGCTTTTTGGGGAAGTGGAGAAATACTGTACAACAAGAAGCAAAGTGCTTGCGGCTATACAAGAACTTGTGGATTCTTGTTTATTATTGAATCTTCAAGATGGGTTGGTAAAGATGCATGATTTAGTTCGTGAAGTGGCCTTATGGATAGCTGACAAAGACATTCAAGTGATCATGGATTTTAAGACAACTATAGAAGCCAATCTGCGATATTTGTTTTGGAACTCTGAAGACTTTCCCAATCAATTTGATGGCACGAATTTGGAGATTTTTATAATAAATGTAAATGGTTCAGAGGATTTGAAGGTCCCATATTCATTCTTCATAGAGATGACAAAGCTCAGAGTATTGCATTTAAAATGCACTTATGTTCACTCACAAATTTTAGATTCATCATTGTTATACTCACTTCAATCATTAATGAATATCCAAACTCTTTCTTTGATGAATTTGAAATTAGGTGACATTTCTATTTTGGGAAACTTACCTAGTCTTGTGACTCTTGAGTTGAATCATTGTTCAATCATTGAATTATCAGAAGAAATTTTGGGATTAAAGAGGTTGAGATTATTGGAGATAAGAGCATGTAAAGTTAAAATGAACAATCCTTTTGAAGTAATTGAAAGGTGCTCGCAACTAGAAGAGTTGTATTTTGTTGATAATGGGAATTTCATAAATGAAAATATAGATTTTCAAAATTTATCTCCTCTTACATTGCAAAGATATCAAATATCTTCTATTGAACTTCTAGAAGAATTTGAAAAGTATGGTTTAATATCAAGATACTTCTTTCCACATGATTTAAGACCTGTAATCTCAGAGGAAACTTTTAAGCAACTTGTAGGAGCTGCTGAGCTTCTTATATTAGGAGGGTATGATGAAACAAGATGGAAAAATCTTGTCCCTGATATTGTTCATATGGAATGTGGAGGCATGAACGATTTAATTATCCTTCATATGTATTCCTGGCCTGACATACAATGCTTAATTGATACTAGAAATCATTATTTTGATGTGATTGCCTTCTCCAAGTTGATTGAGCTACATCTCTTTGAAATGGATATTGAAGATTTATATCGTGGTTCTCTTCCATCTGGCTTTCTTGAGCAACTAGAGACTATGGAGTTAAAAAGCTGTCTAAAGTTGCAGAACATGTTATTTAATGGCAAGTTAAACCTTTGTCACCTTAAGGCCATGGAATTGAAAGGTTGTGTAGCATTGACATCGATTTTCCAACTATCCACTGCTCGAAGCTTAGTGCTATTGGAAGAATTAACAATTAATGATTGTCATGCACTAGAACACATAGTTTTCGATGACAGCTCAAAAGATGAAATAGTGGGTGATGACAATGGTTATGATCAAAAGAGTCATGACTCATTGTTCCCAAAATTGAAAACTCTTAGAATTGCAAGATGTGACAATTTAGAAATGATATTACCTGTTCTTTTTGCTAGAGGTCTTCCTCCTTTGGAAGTTATAAGCATATGTGAATGTGAGAAATTGAAATACATGTTTAGTCAGTATAGAGAGGAGGACCATGTTTTGCATCAAAATGAACAGGCGGTAATGCTCCCTTTAATGAAAGAAATGAAGCTCTCTAGAGTTCCAAGTTTTATTGACATTTATCGAGAACATTGCAAACTCATGTCTTCATCAATGCAAGGGTCATCATCTTCAGTTCCAACAGATATTGCCAATGAGACACTTCTGAATCCTAATGCACATGCTTGCTCTTGGGCTCCTATATGCTGTTTTCCACATGAATCTAAGGCCACAAGCGAAGAGACTAAGGCCAGTGCTACTATTTCTAAGGAGGAGAAATTGGCTGACCTGACAACCCCCCTGGGATTATATAATACAGCTCAATGCATTACGAGACAATTGTTCCACTTTCGTAATATCAAGAAGATGAAACTTGTAAACTTTCCAAATTTATTATCATTGTTCTCCCTGTCCATTGCATCAATGATAATGTGGGAAGAATTGACAATTGAAAAGTGGGATGATTTAAAGCACATGATAACAAATGATGTAGATGATCGTAATGATCAGATCACCTATAAGTCCATTTTCCCAAAATTAGAGAAGTTGGAAATTTGGGATTGCAAGGATTTAGAATTTTTATTTCCATCCACATTATTTGGAGGACTAAAAAATTTAAAATTTTTGACTATCAAGAATGCTCCTGAGCTTAAATATATTTTTGGGAAATACCCTCTTGAGGATCATTTGTTAAATTTGAATCAAAACGATGAGCTTCAATTTGATCTCCCAGCTTTGGAGGTCCTTTGCCTTGGAGATGTACAAAAGATCATTAGCATTTGTGCCATGAATTATTACTTGACATGGCCGTCTCTACATATGGTTGTTCTAGAGAATTGCAACATTGAATCTTTCACTGATTTGATGGTTTGTTCAGATGAAGGACGATTGAAGTGGAAAGCTATGAAGGAATTAGATGCATCAAGAGGTGGGATTCCTCCTTTTCAAGCATCTCAAAATCCTTTGCTTCAACCACTGAACAATATTAGAACAATGAGACTTGTGAGTTGTTCACGCTTAGTATCATTGCTAGCTCTACCCATTGCATCAAAGATTTTATTGGAAGTTTTGATAATTGAAGAATGTCATGAACTGAAGTGCATAGTAGCAGATGAGGAAGACGCTCAAGCTCTCATGAACTTCAATTCTATATTCTCAAAGTTGAAAGAGTTACATGTTTCAAGATGCCGTACACTAGAATATTTATTTCCAGCATCTTTGTTTAGATCTCCCACACATTTGAAATATGTGACCATCGCTCATGCTCCTAAGTTGAAATATGTGTTTGGAACGAGCCATCATGAAGATTCATCTCATGAGAGTCAAAATATTGAGGCTTATATTGATTTCCCAGTTTTAGAAAGCTTAAACCTTGAAGTTATACCAAATCTTGTCAGCATTTTCCCTCAAAACTACTATTTGACAGGGCTGTCTCTAAAGTCTATTGTTTTGGATATGTCTCCTGAGTTTATTATTAAATCTTTTACTGATTTCATGAGTGGTCGGCATGCAAGTCAATGTGATTCCACAACCTCAAAGGTAATTGAGAATCGCATACAAACTATGACAGATCTTACAGTACATTACTCCAATGTAGAAGACATTTTTAATTTGGCACAGTCGAAGGTTGAGAGAAATAGGGAAGGACTTGAACCAGTGACATCAAGCTTAGAATACTTGACTTTGGGAAACCTTAGTGAGTTAAGGAATATATGTGAGGGCCCAAAATATATTTTAAGCCTCAACAATCTTAAGAAACTAAATATTACATCATGCAAAAAGCTTAAAACTGTCTTCTCTATCTCCATATTGAAAAGTCTGCCTGAGTTGTGGAAGCTAGAGATATCTGACTGTGAAGAACTAGTTCACATTGTTGGAGAGGATATTGAGGAAAATGCTAGTGATCGTTTGTCTCATGAGCCATGCTTTCCGAAATTACATGAACTGCATGTTAAGTCTTGTAACATGTTGAAATACCTGTTCTCTATCTCAATGTCTGGTATACTTCCCAACCTTATGTTTTTGAGCATAAAAGAAGCCTCCAAGCTTAAACATGTAATTATTTCACATGTTGAGATGAAAGAGATGGTGATGACAGATGTGCTTCCAGAGCTATATTATCTGATTTTTGAGGAACTTCCTAGTCTTGTTGATGTTTGCCATGGGATTGATTTTCAAGCTGTACGCATATCTTCTGAAGTATATAATTGTCCTAATTTTTCTTTTTATGAAAATAGTACTACACATCTTCAAGTTGGCCTTGAAAATCTAGATTCTAAAGTTCAGGTGGCAAAAGACGAGAATCTTTCTTCGCATCTCAATACCCATCAATTTGGTATGAGAAAAGCTGAAGGGAGCCAAGACTTGGAAACACAACAATCTTCAATTGGCTCACCAAACTTAACAAGGGTTGTCGAAGTGACACCTAAAGAAGGGCCATCATCAAATACCTCACATCCTTGCCCCTTGGATTCTACAAAGCCAATGGCATTGGTTCCTATGAGTCCCATTCTCATTGCCCTTCCTACTGAAGGCAGTTCTTTTACAATCATAGAAATTTTTGAAGAGGAAGAAGAAGAGGAAGAGGAAGGTGGTTTGATAACTATCTGCCGTTGCCAACGGGGCATAAAGGAGGTGAGTTCTTTGATACCAGAGGGTCCACAAATCACTTGTAGAGGGGCTCCTTTACCTCTCATCAATGCTCCTTTGCTTGAGACTTCTATTCAGGCTTTGCTTCATTCAGAGGGAAGTGATCAAGATGATGTTGGAACTACTAACCAGTTGATTCGAGAAGCTGTTGATACTATTCAAGTTTCTAAGAACTCTAATGCACTTGCTATTGTCCCGAGCAAGGATGGTAATGTTGAAACCATTGGGCCCCTCACCACTTTTTTTGAGCATGCCAGTGATGGGATCACTGAGGAAGTGAGTCTAGTTCAAAATGAATGTGAGGTAAATTCTTCGTGCTTTGATGACGATGAGATCACTAGAGAGAGTGATGCTTCTAGTTTTGATGAACTATTGAGGGATGATACTAGTGAGCACGGTGGCCAAGTAAATAGAAGTGGGGATTTTGGTGCTAGTCTAAGTGCCTTGGAAGGAAGAGAACGAGAGTCTTCCTATTCTAAAGGTCGACCTATTAAATATGGCATGAAAAAGTCAGATGTTCAGGTTTTACCACCACAGTTGCCTTCACCTTCACCTCTTTCTTCTTCTCTAGAGACGACGCCTCCTTTCTCCATGACTGATTATGTTTTAACTGTTCCTGGGGTGCAAGAGATAGTTAATATGATGAATTTAGAGGGTGTTGAGCCTTTCTTGCTTGCAAAGGTGTTTAAGAGTCACCCACAGCTACGTCTTCCTACAGAGAATCGAAGCACTCGAATTTTGTTCTTTTCCTATAGAGTGTTGTTGGATATCTTGAACATTTTGGCCACTAGAACTCCCTTATCAATCACTGAGTCAGACAAGAGGTTATTGGCAGAAAACTTGGAGGATGCTTCTACCCTTGGTTTTGACAACAATTGGCTAGAGTCTATCAAGACCAAGGTATTTGGTTGTGATATATCTGAAGCTCATCATGCCCTAGAGCTTCTGAAAGGATTGGATAATAAGCTCAATGCCATTGAAAAAGAGCTTACAACTATCTGTGAGCAGGAAGAAGAGGCTGCTTTAGCCGTGCAAGTGGCTCAAAAGGAGTTAGAGGCAGCCCAAATCCATCTTGACTCAGCACAACTCGAACATGCTAATGTTAAGACACGTCATAGCCAGCTCTTGGAGGCACAACAACACATTTTGGCTCAACAAGATGAATGTTGGGAAGCCATTGCTGCTAAAGATAAGCATTTTGATTTATAA 6675 0.3681 MEKRMLTFPINAPSNILQCLVDLVKNEAQYLCCLENHVENFERKKKILAAKQQDVKINIENASGVSRVKNEAQQWIHEADSLIEVDTETKKKWFFGLCPNCYRQYHSGKELAKKTLEIDELLGRCSFNIVGGPVDLPSLKYHSLPSFIDFESRKLKFQDLLEALEDENCNLIGLQGMGGTGKTSMAIEVGVKLEESKYHSVILLDVSNPPDFKKIRGEIARHLNLTLEEGKEKEHSKTIWSRITNKKEKLLIILDDVWEEFDLIKDIGIPSSHQHKGCSVLIISRNLNVCEVMGCQRMIQLDMLVDKEAFNLFLIHANTSSSRLKGIAQNIVKQCGGLPIAIVAVARALRNRPLAIWREALKTLQNSKSMIDVNQNLTKIYKCLKLSYDNLKNEKAKKLFLICSIFPKDFEISVELLSRIGIGVGLFGEVEKYCTTRSKVLAAIQELVDSCLLLNLQDGLVKMHDLVREVALWIADKDIQVIMDFKTTIEANLRYLFWNSEDFPNQFDGTNLEIFIINVNGSEDLKVPYSFFIEMTKLRVLHLKCTYVHSQILDSSLLYSLQSLMNIQTLSLMNLKLGDISILGNLPSLVTLELNHCSIIELSEEILGLKRLRLLEIRACKVKMNNPFEVIERCSQLEELYFVDNGNFINENIDFQNLSPLTLQRYQISSIELLEEFEKYGLISRYFFPHDLRPVISEETFKQLVGAAELLILGGYDETRWKNLVPDIVHMECGGMNDLIILHMYSWPDIQCLIDTRNHYFDVIAFSKLIELHLFEMDIEDLYRGSLPSGFLEQLETMELKSCLKLQNMLFNGKLNLCHLKAMELKGCVALTSIFQLSTARSLVLLEELTINDCHALEHIVFDDSSKDEIVGDDNGYDQKSHDSLFPKLKTLRIARCDNLEMILPVLFARGLPPLEVISICECEKLKYMFSQYREEDHVLHQNEQAVMLPLMKEMKLSRVPSFIDIYREHCKLMSSSMQGSSSSVPTDIANETLLNPNAHACSWAPICCFPHESKATSEETKASATISKEEKLADLTTPLGLYNTAQCITRQLFHFRNIKKMKLVNFPNLLSLFSLSIASMIMWEELTIEKWDDLKHMITNDVDDRNDQITYKSIFPKLEKLEIWDCKDLEFLFPSTLFGGLKNLKFLTIKNAPELKYIFGKYPLEDHLLNLNQNDELQFDLPALEVLCLGDVQKIISICAMNYYLTWPSLHMVVLENCNIESFTDLMVCSDEGRLKWKAMKELDASRGGIPPFQASQNPLLQPLNNIRTMRLVSCSRLVSLLALPIASKILLEVLIIEECHELKCIVADEEDAQALMNFNSIFSKLKELHVSRCRTLEYLFPASLFRSPTHLKYVTIAHAPKLKYVFGTSHHEDSSHESQNIEAYIDFPVLESLNLEVIPNLVSIFPQNYYLTGLSLKSIVLDMSPEFIIKSFTDFMSGRHASQCDSTTSKVIENRIQTMTDLTVHYSNVEDIFNLAQSKVERNREGLEPVTSSLEYLTLGNLSELRNICEGPKYILSLNNLKKLNITSCKKLKTVFSISILKSLPELWKLEISDCEELVHIVGEDIEENASDRLSHEPCFPKLHELHVKSCNMLKYLFSISMSGILPNLMFLSIKEASKLKHVIISHVEMKEMVMTDVLPELYYLIFEELPSLVDVCHGIDFQAVRISSEVYNCPNFSFYENSTTHLQVGLENLDSKVQVAKDENLSSHLNTHQFGMRKAEGSQDLETQQSSIGSPNLTRVVEVTPKEGPSSNTSHPCPLDSTKPMALVPMSPILIALPTEGSSFTIIEIFEEEEEEEEEGGLITICRCQRGIKEVSSLIPEGPQITCRGAPLPLINAPLLETSIQALLHSEGSDQDDVGTTNQLIREAVDTIQVSKNSNALAIVPSKDGNVETIGPLTTFFEHASDGITEEVSLVQNECEVNSSCFDDDEITRESDASSFDELLRDDTSEHGGQVNRSGDFGASLSALEGRERESSYSKGRPIKYGMKKSDVQVLPPQLPSPSPLSSSLETTPPFSMTDYVLTVPGVQEIVNMMNLEGVEPFLLAKVFKSHPQLRLPTENRSTRILFFSYRVLLDILNILATRTPLSITESDKRLLAENLEDASTLGFDNNWLESIKTKVFGCDISEAHHALELLKGLDNKLNAIEKELTTICEQEEEAALAVQVAQKELEAAQIHLDSAQLEHANVKTRHSQLLEAQQHILAQQDECWEAIAAKDKHFDL 2224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2347 2224 Gene3D Ribonuclease Inhibitor 444 684 IPR032675 -
Prci6g2347 2224 PRINTS Disease resistance protein signature 171 186 - -
Prci6g2347 2224 PRINTS Disease resistance protein signature 335 349 - -
Prci6g2347 2224 PRINTS Disease resistance protein signature 244 258 - -
Prci6g2347 2224 PRINTS Disease resistance protein signature 584 600 - -
Prci6g2347 2224 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1469 1599 - -
Prci6g2347 2224 Coils Coil 2131 2158 - -
Prci6g2347 2224 MobiDBLite consensus disorder prediction 1950 2014 - -
Prci6g2347 2224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 403 IPR027417 -
Prci6g2347 2224 Gene3D Ribonuclease Inhibitor 1165 1384 IPR032675 -
Prci6g2347 2224 Coils Coil 374 394 - -
Prci6g2347 2224 Gene3D Ribonuclease Inhibitor 732 947 IPR032675 -
Prci6g2347 2224 Gene3D Ribonuclease Inhibitor 1388 1639 IPR032675 -
Prci6g2347 2224 Gene3D Ribonuclease Inhibitor 982 1164 IPR032675 -
Prci6g2347 2224 Coils Coil 2166 2186 - -
Prci6g2347 2224 Gene3D - 304 392 IPR042197 -
Prci6g2347 2224 SUPERFAMILY RNI-like 1491 1648 - -
Prci6g2347 2224 Gene3D - 139 302 IPR027417 -
Prci6g2347 2224 SUPERFAMILY L domain-like 748 932 - -
Prci6g2347 2224 SUPERFAMILY L domain-like 462 1356 - -
Prci6g2347 2224 Pfam NB-ARC domain 160 390 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2347 Prci-Chr6 34291744 34309082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2347 172 570 WRKY Transcription Factor Family AT5G45050 24.122 2.53e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2347 - - pcin:129313598 4308.44