Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2278 ATGAGTTTCTCTGGTTCTTCCACGGAGGCTAAACGCCGCACAGTTCGTACCCTCGTCGGAAAACTGAGCTCTGTGTTGGAGAAAACCCGGGTCGATGCTCTGTGCCAGCTTCGTCTTATGACGAAGCAAGACCCGGAGATTCGTCCTCTGATTGTTGATTCTGGTGCAATTCCTTACCTAGCAGAAACACTTTATTCGTCTACGCCTGATTCTCAGGAGAACGCCGCGGCGACGCTTTTGAATATATCGATCTCCTGTAAAGAGCCTCTGGTGTCCACGCGCGGCGTTCTCGACGCGATTTCACATGTTTTGTCGAATCATAGATCTACGTCTTCTCCCTCCGCCGTCCAATCCTCCGCCGCCACGTTACACAGCCTCCTCGTTATTGATGAGTACCGGCCGATCATCGGATCGAAGCGTGACATCGTGTACGCACTTGTTGACATAGTCAAGAGCCTCAATTCGCCGTCTAGATCGATCAAGGACGCTCTCAAGGCCTTGTTCGGAATCTCGCTTTACCCGCTTAATCGGAGCACGATGATCCATCTCGGTGCGGTTGCGCCGTTGTTCTCTCTGGTTGTGAAGGACGGAAGAGTCGGGATCGTGGAGGATTCGACGGCGGTGATCGCACAAATCGCCGGCTGCGAGGAGAGCGAAGAGGCGTTTCGGAAGGTATCAGGAATCGGAGTGTTGGTGGATCTGATGGATCCGGTGACGGGATCGAGTATGAGGACGAAGGAGAATGCTGTGTCTGCGTTGTTGAATCTGGTGATGTGTGGAGGGGACAAGTTAGCGGCGGATGTGAGAGAGAAAGCCGAGAGGGCAATGGACGGCCTCGCCGACGTGGCGGAGAACGGCAGCGCAAAGGGGAAGAACAAGGCGGTGGAACTGTTGAAGGTGTTGTTTGATGATGATGGATTTGGAAGCGACGGCCATGGATTGACGGATCAATCTTCATGA 960 0.5365 MSFSGSSTEAKRRTVRTLVGKLSSVLEKTRVDALCQLRLMTKQDPEIRPLIVDSGAIPYLAETLYSSTPDSQENAAATLLNISISCKEPLVSTRGVLDAISHVLSNHRSTSSPSAVQSSAATLHSLLVIDEYRPIIGSKRDIVYALVDIVKSLNSPSRSIKDALKALFGISLYPLNRSTMIHLGAVAPLFSLVVKDGRVGIVEDSTAVIAQIAGCEESEEAFRKVSGIGVLVDLMDPVTGSSMRTKENAVSALLNLVMCGGDKLAADVREKAERAMDGLADVAENGSAKGKNKAVELLKVLFDDDGFGSDGHGLTDQSS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2278 319 PANTHER U BOX DOMAIN-CONTAINING 14 301 - -
Prci6g2278 319 Gene3D - 3 305 IPR011989 -
Prci6g2278 319 FunFam ARM repeat superfamily protein 9 306 - -
Prci6g2278 319 Pfam Armadillo/beta-catenin-like repeat 44 83 IPR000225 GO:0005515
Prci6g2278 319 SUPERFAMILY ARM repeat 14 302 IPR016024 -
Prci6g2278 319 SMART arm_5 44 84 IPR000225 GO:0005515
Prci6g2278 319 SMART arm_5 215 258 IPR000225 GO:0005515
Prci6g2278 319 SMART arm_5 173 214 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2278 Prci-Chr6 33244242 33245734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2278 15 313 U-box Gene Family AT2G23140 35.000 3.33e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2278 - - qsa:O6P43_001485 425.246