Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2265 ATGAGAAGTCTAATACAAACAGCGACAGAAGACCCAGAGGAATTGGGTGCTAGAGGAGAGTTTGATTTGGGTGGAGGAAGAAAAAGGTATGCATTGGTTCAGTGTAGCAGAGACCTTAACACTGAAGGTTGCAGACAATGCTTGGAGGCTATGCTGGATAAGGTTCCTCAGTGTTGTGAGCACAAGCTAGGATGGCAGGTTTTGGCTCCAAGTTGTCTGATTAAGTACGACGATTTCATGTTTTATCAATCAACCACTTCCTCTAATTCTAATTCTTCTACAGCCCATAATGGTGCTAGGAAGTCAAAAGCCTTGATCATAATCATAACTGTATCAGTGGCCATGGCTATATTAATTTTGTCTCTGTTGATCTTTTGGTGGAGGAAGACTAGAAATGATAATATGCCGTTGGAGAACACTCCTATATTTTACGGCCTTTCTGAAAGAGAGACTTCACTGAACTCAGACCTTCCCACAATCCCTTTAGTTGTGATTCAACAAAGTACGCATCAATTTTCAGAAGCATTTAAATTGGGAGAAGGTGGTTTTGGTCCCGTTTATAAGGGGACATTGCCAGATGGGAGGGAAATTGCTGTGAAAAGACTTTCAAAAACTTCAGGTCAAGGTTCAAAGGAGTTCAAAAACGAAGTGATATTCATAGCAAAATTACAACATAGAAACCTTGTGAGACTCTTGGGCTGTTGTATAGAGGAAAATGAAAAGCTACTTATATATGAGTACCTGTCTAATTCTAGCCTTGATTTCCACCTTTTCAATGATGAAGAGAATAGGAAGAAACTAGATTGGAAACGCAGACTGAATATTATTAATGGGGTTGCAAGAGGACTTTCATATCTTCATGAAGACTCTCGACTTAGAGTAATTCACAGAGATTTGAAAGCTAGTAATGTTCTTTTGGACAATGAGATGAATCCTAAAATATCAGATTTTGGACTAGCAAGAGCTTTTGATGGAGGCCAAAATCAAGGAATAAATACAGGCCGAGTAATGGGTACTTATGGATATATGGCCCCAGAATATGCTATGGAAGGATTATTTTCAGTAAAATCAGATGTTTTTAGCTTTGGGGTTCTTCTACTTGAAATCATATGTGGAAAAAGGGTGAGATCTTTCCACTTCTCTCAACATCGTCAAAGCCTTCTAATTTACACTTGGAGTCTATGGTGTGATGGAAAATGCTTGGAACTGATGGACCCAATTCTGAAAGATTCATACGTAGAAAGCGAAGTTTTCAAATGCATACACATTGGCTTGCTTTGTGTCCAAGAAGATGCAAAAGATAGACCAACAATGTCTGGTGTTGTAGTTATGCTTGCAAGTGACACAATGACCTTTCCCAAGCCTAATCATCCTGCATTTTCACTAGGAGGAATGGGCCCAGAAGATTCATCTACATCAAAAAATTCCGAAGATGATCCTTCAGTTAATAAGGTGACAATGTCTAACGTCACAGCTAGGTGA 1482 0.392 MRSLIQTATEDPEELGARGEFDLGGGRKRYALVQCSRDLNTEGCRQCLEAMLDKVPQCCEHKLGWQVLAPSCLIKYDDFMFYQSTTSSNSNSSTAHNGARKSKALIIIITVSVAMAILILSLLIFWWRKTRNDNMPLENTPIFYGLSERETSLNSDLPTIPLVVIQQSTHQFSEAFKLGEGGFGPVYKGTLPDGREIAVKRLSKTSGQGSKEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLIYEYLSNSSLDFHLFNDEENRKKLDWKRRLNIINGVARGLSYLHEDSRLRVIHRDLKASNVLLDNEMNPKISDFGLARAFDGGQNQGINTGRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIICGKRVRSFHFSQHRQSLLIYTWSLWCDGKCLELMDPILKDSYVESEVFKCIHIGLLCVQEDAKDRPTMSGVVVMLASDTMTFPKPNHPAFSLGGMGPEDSSTSKNSEDDPSVNKVTMSNVTAR 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2265 493 Pfam Salt stress response/antifungal 26 77 IPR002902 -
Prci6g2265 493 SMART serkin_6 172 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2265 493 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 489 - -
Prci6g2265 493 SUPERFAMILY Protein kinase-like (PK-like) 155 445 IPR011009 -
Prci6g2265 493 Gene3D Phosphorylase Kinase; domain 1 145 247 - -
Prci6g2265 493 MobiDBLite consensus disorder prediction 456 493 - -
Prci6g2265 493 ProSiteProfiles Protein kinase domain profile. 172 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2265 493 Gene3D Transferase(Phosphotransferase) domain 1 248 453 - -
Prci6g2265 493 CDD STKc_IRAK 178 445 - -
Prci6g2265 493 MobiDBLite consensus disorder prediction 466 493 - -
Prci6g2265 493 Gene3D - 1 81 IPR038408 -
Prci6g2265 493 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 248 453 - -
Prci6g2265 493 ProSiteProfiles Gnk2-homologous domain profile. 1 81 IPR002902 -
Prci6g2265 493 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 143 247 - -
Prci6g2265 493 Pfam Domain of unknown function (DUF3403) 447 493 IPR021820 GO:0004674
Prci6g2265 493 Pfam Protein tyrosine and serine/threonine kinase 177 442 IPR001245 GO:0004672|GO:0006468
Prci6g2265 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2265 Prci-Chr6 32839767 32847984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2265 30 485 Receptor kinase-like Gene Family AT4G05200 44.628 1.53e-139 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g2265 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2265 - - gmx:100796972 632.869