Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2264 ATGGTACGGATCTGGTACGACTTCTGCATCCTCCGATACTCTAACAAGAACTTCTTTGGGAACGTGACAACTAGCCCATCGTGGCATGTCGTCGGAGCAAAGACGGTGTCAGATCCGTTAGAGGGGAAGAAGGCGGAGAGTTTCATGAGAAGTCTAATACAAACAGCGACAGAAGACCCAGAGGAATTGGGTGCTAGAGGAGAGTTTGATTTGGGTGGAGGAAGAAAAAGGTATGCATTGGTTCAGTGTAGCAGAGACCTTAACACTGAAGGTTGCAGACAATGCTTGGAGGCTATGCTGGATAAGGTTCCTCAGTGTTGTGAGCACAAGCTAGGATGGCAGGTTTTGGCTCCAAGTTGTCTGATTAAGTACGACGATTTCATGTTTTATCAATCAACCACTTCCTCTAATTCTAATTCTTCTACAGCCCATAATGGTGCTAGGAAGTCAAAAGCCTTGATCATAATCATAACTGTATCAGTGGCCATGGCTATATTAATTTTGTCTCTGTTGATCTTTTGGTGGAGGAAGACTAGAAATGATAATATGCCGTTGGAGAACACTCCTATATTTTACGGCCTTTCTGAAAGAGAGACTTCACTGAACTCAGACCTTCCCACAATCCCTTTAGTTGTGATTCAACAAAGTACGCATCAATTTTCAGAAGCATTTAAATTGGGAGAAGGTGGTTTTGGTCCCGTTTATAAGGGGACATTGCCAGATGGGAGGGAAATTGCTGTGAAAAGACTTTCAAAAACTTCAGGTCAAGGTTCAAAGGAGTTCAAAAACGAAGTGATATTCATAGCAAAATTACAACATAGAAACCTTGTGAGACTCTTGGGCTGTTGTATAGAGGAAAATGAAAAGCTACTTATATATGAGTACCTGTCTAATTCTAGCCTTGATTTCCACCTTTTCAATGATGAAGAGAATAGGAAGAAACTAGATTGGAAACGCAGACTGAATATTATTAATGGGGTTGCAAGAGGACTTTCATATCTTCATGAAGACTCTCGACTTAGAGTAATTCACAGAGATTTGAAAGCTAGTAATGTTCTTTTGGACAATGAGATGAATCCTAAAATATCAGATTTTGGACTAGCAAGAGCTTTTGATGGAGGCCAAAATCAAGGAATAAATACAGGCCGAGTAATGGGTACTTATGGATATATGGCCCCAGAATATGCTATGGAAGGATTATTTTCAGTAAAATCAGATGTTTTTAGCTTTGGGGTTCTTCTACTTGAAATCATATGTGGAAAAAGGGTGAGATCTTTCCACTTCTCTCAACATCGTCAAAGCCTTCTAATTTACACTTGGAGTCTATGGTGTGATGGAAAATGCTTGGAACTGATGGACCCAATTCTGAAAGATTCATACGTAGAAAGCGAAGTTTTCAAATGCATACACATTGGCTTGCTTTGTGTCCAAGAAGATGCAAAAGATAGACCAACAATGTCTGGTGTTGTAGTTATGCTTGCAAGTGACACAATGACCTTTCCCAAGCCTAATCATCCTGCATTTTCACTAGGAGGAATGGGCCCAGAAGATTCATCTACATCAAAAAATTCCGAAGATGATCCTTCAGTTAATAAGGTGACAATGTCTAACGTCACAGCTAGGTGA 1626 0.4028 MVRIWYDFCILRYSNKNFFGNVTTSPSWHVVGAKTVSDPLEGKKAESFMRSLIQTATEDPEELGARGEFDLGGGRKRYALVQCSRDLNTEGCRQCLEAMLDKVPQCCEHKLGWQVLAPSCLIKYDDFMFYQSTTSSNSNSSTAHNGARKSKALIIIITVSVAMAILILSLLIFWWRKTRNDNMPLENTPIFYGLSERETSLNSDLPTIPLVVIQQSTHQFSEAFKLGEGGFGPVYKGTLPDGREIAVKRLSKTSGQGSKEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLIYEYLSNSSLDFHLFNDEENRKKLDWKRRLNIINGVARGLSYLHEDSRLRVIHRDLKASNVLLDNEMNPKISDFGLARAFDGGQNQGINTGRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIICGKRVRSFHFSQHRQSLLIYTWSLWCDGKCLELMDPILKDSYVESEVFKCIHIGLLCVQEDAKDRPTMSGVVVMLASDTMTFPKPNHPAFSLGGMGPEDSSTSKNSEDDPSVNKVTMSNVTAR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2264 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 342 354 IPR008271 GO:0004672|GO:0006468
Prci6g2264 541 SMART serkin_6 220 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2264 541 Pfam Protein tyrosine and serine/threonine kinase 225 490 IPR001245 GO:0004672|GO:0006468
Prci6g2264 541 Gene3D - 35 129 IPR038408 -
Prci6g2264 541 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 54 537 - -
Prci6g2264 541 Pfam Domain of unknown function (DUF3403) 495 541 IPR021820 GO:0004674
Prci6g2264 541 Gene3D Phosphorylase Kinase; domain 1 193 295 - -
Prci6g2264 541 SUPERFAMILY Protein kinase-like (PK-like) 203 493 IPR011009 -
Prci6g2264 541 ProSiteProfiles Gnk2-homologous domain profile. 24 129 IPR002902 -
Prci6g2264 541 MobiDBLite consensus disorder prediction 504 541 - -
Prci6g2264 541 Gene3D Transferase(Phosphotransferase) domain 1 296 501 - -
Prci6g2264 541 Pfam Salt stress response/antifungal 45 125 IPR002902 -
Prci6g2264 541 CDD STKc_IRAK 226 493 - -
Prci6g2264 541 MobiDBLite consensus disorder prediction 514 541 - -
Prci6g2264 541 ProSiteProfiles Protein kinase domain profile. 220 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2264 541 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 296 501 - -
Prci6g2264 541 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 192 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2264 Prci-Chr6 32839754 32847984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2264 4 533 Receptor kinase-like Gene Family AT4G05200 41.637 1.55e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g2264 PK_Tyr_Ser-Thr 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2264 - - gmx:100796972 694.115