Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2259 ATGTTGGGATTATCGAAACCTGATTTTCTGATCATCAGCTTCATAGTTATTCTGATAATCAGTTTCATCAGAACAAGTCAGTCTCAAGCACCAAACTACGTTGGAGATGACTGCCATAACAAAACCCCTCAAGCTCTTACTTCCTCCTACAAAGCCAATCTTAACCAGCTCCTCTCAAGGCTCTCGGCCGATTCTACCACCGGCAAACGCTACAGCAACACCACCGTCGGCAACACCGCCGATGATGCCGTGTACGGCCACTATGACTGCCGCATCGACCTTGCCGGATATTTCTGCCAGTTCTGTCTCTCCACTGCCACCAGAGAGGTTCTCCAACGGTGTCCCAATCAACTTTCTGCTGTATTATGGTATGACTTCTGCATCCTTCGATACTCTAACAAGAACTTCTTTGGGAATGTGACGGCAAGCCCATGGTGGAATGTTAGCGATGCGAAGATGATGTCGGTTTCGGGGGAGGGGAAGAAAGCAGAGAGTTACTTGAGAAGTTTGATAGAGAAAGCAACGGAGGGGATGAAAGAATTGGGCGCAAAGGGAGAGTTTGATTTGGGTGGAGGAAGAAAAAGGTACGGATTGGTTCAGTGTAGTAAAGACCTTGACACTGAAGGTTGCAGACAATGCTTGGAGGCTATGGTGGATAAGGTTCCTCAATGTTGTGAACAAAAACAAGGCTGGCAAGTTTCATCTCCTAGTTGTATGATCAAGTACAATGATTACATGTTCTATCAATCATCCTCTTCTCTTAGTCCTAATCCTCCTTCAGAAAATAATGGTGTCAGCAAGTCAAAAGCATTGATCATAAGCATAACTGTATTTATGGGTGTAGCTTTATTATGTGTGGGTTTTTTCATCTGGAGAAGGAAGACTAGAAAAGAAGAAATGCCGTTGGAGAGCAATCTTATGATTAATGACCCTTCTCAACGAGAGGCTTCATTGAACACAGACCTTCCCACAATTCCTTTAATTGTAATTCAACAAAGTACACATCACTTTTCAGAAGTCTCTAAATTGGGAGAAGGGGGATTTGGTCCTGTCTATAAGGGTACATTACCAGATGGGAGGGAAATTGCTGTGAAAAGACTCTCACAAACTTCAGGTCAAGGTACAAAAGAGTTCAAGAATGAAGTGATATTCATAGCAAAGCTGCAACATAGAAACCTTGTTAGACTCTTGGGTTGTTGTATAGAACAAAATGAAAAGTTGCTTGTGTACGAGTACATGCCAAATTCCAGCCTTGATTTCCATCTTTTCAGTGAGGAAAATAGAAAGAAACTAAATTGGGAACGAAGACTACATATCATTAATGGAATTGCAAAAGGACTTTCATATCTTCATGAAGATTCTCGACTTAGAATAATTCATAGAGATTTGAAAGCTAGCAATGTTCTTTTGGATCATGAGATGAATCCTAAAATATCAGATTTTGGGTTAGCAAGGACTTTTGAAGGAGCTCAAAATCAAGGAATAAATACCGGCAGAGTAATGGGTACCTATGGATACATGGCTCCAGAATATGCTATGCAAGGATTATTTTCAGTCAAATCAGATGCTTATAGCTTTGGAGTTGTTCTACTAGAAATCATATGCGGAAAAAGGATTAGGGATTTCCACCTATGTGAATGTGGTCAAAGTCTTCTAATTTATACTTGGAATCTGTGGTGCGAAGGAAAATGTTTGAAACTCATGGATCCAATGTTGGAAGATTCATACATAGGAAGTGAAGTTTTGAAGTGCATACACATTGGTTTGCTTTGTGTTCAAGAAGATGCAAAAGACAGACCTACCATGTCCACTATTGTGGTCATGCTTGCAAGTGACACAATGTCATTTCCCAAGCCTAATCGTCCTGCATTTTCAGTGGAAAGAACGGCTAATATTCCAGAAGATTCATCTACTTCAAAAGATTCTAAAGTTCCTTCTGTGAATGGGGTAACAGTGTCTTATATTATACCTAGGTGA 1977 0.4072 MLGLSKPDFLIISFIVILIISFIRTSQSQAPNYVGDDCHNKTPQALTSSYKANLNQLLSRLSADSTTGKRYSNTTVGNTADDAVYGHYDCRIDLAGYFCQFCLSTATREVLQRCPNQLSAVLWYDFCILRYSNKNFFGNVTASPWWNVSDAKMMSVSGEGKKAESYLRSLIEKATEGMKELGAKGEFDLGGGRKRYGLVQCSKDLDTEGCRQCLEAMVDKVPQCCEQKQGWQVSSPSCMIKYNDYMFYQSSSSLSPNPPSENNGVSKSKALIISITVFMGVALLCVGFFIWRRKTRKEEMPLESNLMINDPSQREASLNTDLPTIPLIVIQQSTHHFSEVSKLGEGGFGPVYKGTLPDGREIAVKRLSQTSGQGTKEFKNEVIFIAKLQHRNLVRLLGCCIEQNEKLLVYEYMPNSSLDFHLFSEENRKKLNWERRLHIINGIAKGLSYLHEDSRLRIIHRDLKASNVLLDHEMNPKISDFGLARTFEGAQNQGINTGRVMGTYGYMAPEYAMQGLFSVKSDAYSFGVVLLEIICGKRIRDFHLCECGQSLLIYTWNLWCEGKCLKLMDPMLEDSYIGSEVLKCIHIGLLCVQEDAKDRPTMSTIVVMLASDTMSFPKPNRPAFSVERTANIPEDSSTSKDSKVPSVNGVTVSYIIPR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2259 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Prci6g2259 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 653 - -
Prci6g2259 658 ProSiteProfiles Gnk2-homologous domain profile. 141 247 IPR002902 -
Prci6g2259 658 Gene3D Phosphorylase Kinase; domain 1 302 412 - -
Prci6g2259 658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 303 412 - -
Prci6g2259 658 ProSiteProfiles Protein kinase domain profile. 337 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2259 658 Pfam Protein tyrosine and serine/threonine kinase 341 608 IPR001245 GO:0004672|GO:0006468
Prci6g2259 658 FunFam cysteine-rich receptor-like protein kinase 10 413 616 - -
Prci6g2259 658 Gene3D Transferase(Phosphotransferase) domain 1 413 618 - -
Prci6g2259 658 CDD STKc_IRAK 343 609 - -
Prci6g2259 658 SUPERFAMILY Protein kinase-like (PK-like) 319 609 IPR011009 -
Prci6g2259 658 Gene3D - 32 136 IPR038408 -
Prci6g2259 658 Gene3D - 147 247 IPR038408 -
Prci6g2259 658 Pfam Salt stress response/antifungal 38 133 IPR002902 -
Prci6g2259 658 Pfam Salt stress response/antifungal 164 245 IPR002902 -
Prci6g2259 658 FunFam Cysteine-rich receptor-like protein kinase 28 34 135 - -
Prci6g2259 658 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Prci6g2259 658 SMART serkin_6 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2259 Prci-Chr6 32589417 32600577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2259 12 658 Receptor kinase-like Gene Family AT4G05200 39.823 1.09e-165 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g2259 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2259 - - gmx:100796972 805.438