Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2235 ATGGAGCAATGCCTTCTTGACCTTGTAAAGAATGAAGTCCAAAGTTTGATGAATTTAGTGAAAAATGAAGCTCAATATTTATGTTGTTTCAACAGTTTTGTTGAAAATTTTGAGCAAGAAAGGAAAAGATTAGCTCCAAAACACATTGATATGAATAAAAAGATAAATAAAGCTAGAGGTGTTTTCAGTTTTAAGTCTGAAGCATTGGATTGGAAGCATGAAGCTGATGATATCATTAATATTGACACTACAGCAAAGAAGAAATGCTTTTTTGACTTATGTCCTAATTGCTGGTGGCAATATTGGCGAGGCAAGGAGTTGGCAAAGAAGACAGAATGCACTAAAGTACTATTGGGAAGAAGTAATACGAACATAATAGCAGGGAAAGCTTATTTACCAATCAAGGAATACTTTTTTCCTTCACAAGAATTTGTTCATTTCAAGAGTAGAGAATTAGAATTCCAAGATCTAAGGAAGGCATTAGAAGATGGTAATTGCAATATAGTTGGATTGCAAGGTATGGGGGGAACGGGCAAAACCTACATGGCAAAAAAAGTGGGTAGTGAATTAGAAGGATCCAGATTTGACGAAGTCTTCCTTCTTGAGGTGTCTATTCTTCCAGATTTCAATAAGCTTAGACGTAAGTTTGTCGAATATCTACGATTGCCCTTAGAGGAATGGAAGGAAGAGGAATACTCTATGATAATATGGATTACGCTCCTTGATATGAAAAAAAAACTACTTATAATTCTTGATGATGTATGGGAAGCGTTTGATCTGAAACGTCACTTGGGGATTCCATGTAGCCACCACCAGCACAAGGGTTGTAGTGTATTAATAACTACTCGTAAGGAACGTGTTTGTGTAAAAATGGAATGCCAAATCATAATTAAACTTGAGACTCTGAATGATAAGGATGCGTTGGATCTTTTCCAAAAACATGTTGGTAATATTAATGATTCCTCTCGTGGTTTGAAGGGTGTACCGGAGAAAATTGTCAAGCATTGTGGGGGAGTACCTATTGCTATTGCAGCAATAGCAGAAGCATTAAAAGGTCAGCCAACATCAGTTTGGAAGGATGCACTAAAATCCTTGAAAGATTGTCTTGGTGATCAAAATTTGACAAAGGCCTATAAATGTTTGGATTTAAGCTATTGTAACTTGAAAAATGAAAAGGCTAAAGTACTCTTTTTGATATCTTCTCTGTTTCCAAAAGGTTTTGAAGTTCCAGAGCAGCTTTTGAGCAAGATTGGTATAGGACTAGGCTCTTCTGGGGATAATAACAAATACCATGCAACAAGAATTGAAGTGCTTGCAGCTATAATGGAACTCAAAGATTCTACTTTATTGTTCAATAGTGGGGGAAAATTTGTAATGCATGATTTGATTTATGATGTGGCATTGCAGATCAGAGAAAAAGATTTTCAAATGATTGTGAATTCTAATATGGTTATAAAAGACAACATACGATATTTGTTTTGGAAAAATAGTTATTTTCCTGGTGAATTTGATGGAAAGGAGCTGGAGCTTTTATCAATATTTCTAGATGATTCAAAGGATTTGAAAGTCTCAAATGCATTCTTTATGGAGATGACAAGGCTCAAAGTCTTGATTTTAGTTAGTACTTGTGACTATAGAATTTCAGCTCTATCATTGTTGCATTCTCTTCGGTCACTAGCAAATATTCAAACACTCACCCTGATGAAATTGAAGTTAGGAGACATCTCTATGTTAGAAAACTTATCAAGTCTTGTAACTCTTTCATTGCATCATTGTTCATTCATTAAATTACCTGAAGAATTTCCCAAATTAAAGAAGTTGGGATTGTTGGAGCTAGAAATGTGTGAAATTGAAATGAATAATCCTTTTGAAGTGATTGAAAAATGCTCACAGCTAGAAGAGTTGGCTTTTGTTGGTAACAAGTGTGGCAAAGAAGAAAAAGATGCAATTTCTCAAAATGAATCTTCTCTTTCATTGCATAGATATCAAATATCTAATGGAAGCCTTTCAAAGTATCATAATAAGCATGGTTCCGTATCAAAATGCTTTCGGTTAGATGATTCAAGGCATTTAATCTCGGAGGCAACATTTAAGCGACTTGTGGGAGAAACTGAACTTCTTATCTTAGAAGGAAGGTATGAAGAATCTAGATGGAAAAATCTTATCCCTAGCATTATTCCAGTAGATAATCAAGGAATGAATGAGTTGATGATTCTTTATTCAAGTTCTTGTCCTGATATAGAGTGCCTTGTTGATACTAAAAATCATTCTTTTCATGTGATTGCTTTCCCCAATCTGGTTGAACTACATCTTTATAAAATGGATGTTGAAGAATTATATCAGGGTCCTATGCCATATGGCTTTCTGGAGCAGTTGAATATTATGAAGTTAAAGGATTGTCAGAAATTGAAGGGCGTGTTATTTAATGGCAACTTCAACCTATGCTATCTTCAGTCATTGGAATTGGAAGATTGTCCTATGTTGACATCAATTTTCCAGCAATCAACTACTCAAACACTAAAGCAACTGGGAGAATTAAGAATTAAAAATTGCAAAGCATTGCAATACATAATGACATATGAGAGTTTAGGAGGGGAAATAGTGGATGATGGTGACAATGATCAAGAGAGTTATGGTTCATTGTTCCCAAAATTAAAAACTCTTCAAATTACAGGATGTGACCAATTAGAAATAATCTTGCCAATCCTTTTTGCTGAAGGCCTTCCATCTTTGGAAGAGATAAGCGTATGTGAGTGTGAGCAGTTGAAATTCATATTTTATAAGTTTGTGGGGGAGGACCATGATATGCTCCCTTCACTAGAAGAAATGGAACTCTCTGTAGTACCAAGTTTGATGGGAATTTATAAAGAATATCAACAACCAATAACTTCACCCATGCAAAAACCACCATCTCCACTTGCAAAGGATAATTCCAAGCAAATACTTCAACGTTTTCGTTTTCTGAATAGCTCGAGGACCACCAATGAGGATAAATTGCTTGACCACACAATCCAACAGGGCTTAAGTGCATCAAAAAAATGGATTAATGCTGTTGATATCCTCAAGAGTCTCAATGTTCATCATATCAGAAAGTTGAAAATTGTGGATCTCACTTTGAAGTCAGCATCACTGCTCACTTTATCTATGGCCTCCATGATAATGTGGGAAGAACTGACAATTGGGAAATGCATTGGACTGAAGCACTTGATATCAAGCAAGGCATACGATAATAAAGATCAAATCAACACCAGCTTCATTTTCCCAAAGTTAGAAATGCTAGAGATTTGGGAGTGCAAGGACTTGAAATTTTTATTTCCATCTACAACACCTGTAGGAATTAAAAATTTGAAGTCTTTGACTATCAAAGGTGCTCCTGAGCTAAAATATGTCTTTGGAAAATACCAGCATGATGACCATTTATTAAATCAAAATTCAGAAGTTATGCGTTACTTTGATCTCCCTGCTTTGAAGTTCCTCTACTTTAAAGATGCACCGAAGATGATCAGCATTTGTTTCATGGATTTTATCGTGGTATTGCCATCTCATGTCATTTTGGAAAATTGCGGCATTGAATCTGTGACTAAATTGATGGTTTGTTCAGATGAAGAACATCTTAATCAAGAAGCCACAAAGGTAACACTCTTTCTAACTTAG 3654 0.3536 MEQCLLDLVKNEVQSLMNLVKNEAQYLCCFNSFVENFEQERKRLAPKHIDMNKKINKARGVFSFKSEALDWKHEADDIINIDTTAKKKCFFDLCPNCWWQYWRGKELAKKTECTKVLLGRSNTNIIAGKAYLPIKEYFFPSQEFVHFKSRELEFQDLRKALEDGNCNIVGLQGMGGTGKTYMAKKVGSELEGSRFDEVFLLEVSILPDFNKLRRKFVEYLRLPLEEWKEEEYSMIIWITLLDMKKKLLIILDDVWEAFDLKRHLGIPCSHHQHKGCSVLITTRKERVCVKMECQIIIKLETLNDKDALDLFQKHVGNINDSSRGLKGVPEKIVKHCGGVPIAIAAIAEALKGQPTSVWKDALKSLKDCLGDQNLTKAYKCLDLSYCNLKNEKAKVLFLISSLFPKGFEVPEQLLSKIGIGLGSSGDNNKYHATRIEVLAAIMELKDSTLLFNSGGKFVMHDLIYDVALQIREKDFQMIVNSNMVIKDNIRYLFWKNSYFPGEFDGKELELLSIFLDDSKDLKVSNAFFMEMTRLKVLILVSTCDYRISALSLLHSLRSLANIQTLTLMKLKLGDISMLENLSSLVTLSLHHCSFIKLPEEFPKLKKLGLLELEMCEIEMNNPFEVIEKCSQLEELAFVGNKCGKEEKDAISQNESSLSLHRYQISNGSLSKYHNKHGSVSKCFRLDDSRHLISEATFKRLVGETELLILEGRYEESRWKNLIPSIIPVDNQGMNELMILYSSSCPDIECLVDTKNHSFHVIAFPNLVELHLYKMDVEELYQGPMPYGFLEQLNIMKLKDCQKLKGVLFNGNFNLCYLQSLELEDCPMLTSIFQQSTTQTLKQLGELRIKNCKALQYIMTYESLGGEIVDDGDNDQESYGSLFPKLKTLQITGCDQLEIILPILFAEGLPSLEEISVCECEQLKFIFYKFVGEDHDMLPSLEEMELSVVPSLMGIYKEYQQPITSPMQKPPSPLAKDNSKQILQRFRFLNSSRTTNEDKLLDHTIQQGLSASKKWINAVDILKSLNVHHIRKLKIVDLTLKSASLLTLSMASMIMWEELTIGKCIGLKHLISSKAYDNKDQINTSFIFPKLEMLEIWECKDLKFLFPSTTPVGIKNLKSLTIKGAPELKYVFGKYQHDDHLLNQNSEVMRYFDLPALKFLYFKDAPKMISICFMDFIVVLPSHVILENCGIESVTKLMVCSDEEHLNQEATKVTLFLT 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2235 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 397 IPR027417 -
Prci6g2235 1217 Pfam NB-ARC domain 158 384 IPR002182 GO:0043531
Prci6g2235 1217 Gene3D Ribonuclease Inhibitor 467 689 IPR032675 -
Prci6g2235 1217 Gene3D Ribonuclease Inhibitor 715 865 IPR032675 -
Prci6g2235 1217 Gene3D Ribonuclease Inhibitor 872 1196 IPR032675 -
Prci6g2235 1217 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 909 1103 - -
Prci6g2235 1217 PRINTS Disease resistance protein signature 168 183 - -
Prci6g2235 1217 PRINTS Disease resistance protein signature 336 350 - -
Prci6g2235 1217 PRINTS Disease resistance protein signature 579 595 - -
Prci6g2235 1217 PRINTS Disease resistance protein signature 241 255 - -
Prci6g2235 1217 SUPERFAMILY L domain-like 457 955 - -
Prci6g2235 1217 Gene3D - 135 298 IPR027417 -
Prci6g2235 1217 Gene3D - 301 389 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2235 Prci-Chr6 32050588 32054986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2235 169 470 WRKY Transcription Factor Family AT5G45050 26.140 2.23e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2235 - - pcin:129314075 2393.23