Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2222 ATGCGGAATTTACCAGAGCGCTTTTTTAGAAAAGCGCTCCTATCGTTGTCCGCCGCTGTTCGCTGTTCCAGATCGTCGTTCGCCACTGTTTGCTGTTCCAAATCATCGTCTGCTGTTGTTCATTGTTCCAGATTAGTGTTCATCGCTATTTGTGCGGCTGCTGTACATCGGAGGAAGCGACACCGTGAAGACCTCCGTTGTAGCCGTGTGTCATTGCTGTACAGCCGAGGAAGCAACGCTATAAAGACCTCCGCTACTGCCGTGAAGACTTTCGTTTTCTGCCGTGAAGACTACACTGTGAAGTTGCTACGACGTCGTTGCACCCAGGAGTGCATTTTCGCTCCTTACTTCCCTTTTGATGATCCTCAAAAGTTTGCCATCGTCCACAAAGTCTTCGGTGTCAGCAATATCAGCAAAATGTTGCAGGAGCTTCCACTGCATCAAAGAGCGGATGCAGTTAGCAGTCTGGTGTACGAAGCGAACTTGAGAGTGAGAGATCCGATGTACGGATGCGTCGGAACTATATCCTATCTGCAAAATCAAGTTTCACAGTTAAAGACGCAGCTTGCAATGGCTCAGACAGAGATTATGTGCATCCAGATGCAGCAAGATTATTCTACAAACTTATCAACTCAGATTGATCATTACCAAGATGACAATAAGTCGCTTGTCTTATCTGATAACAACTATGAAAGCTGCAATATTAATCATAATCTTGCTGATCATCATCATCATCATCAGTATCTCAGTTTTGCTTCTTCTTCTTCCTCGTCTAGTAATGTAATCCAGGACCCTTTTATGAGGGAATCATTTTGGACTTAG 822 0.4477 MRNLPERFFRKALLSLSAAVRCSRSSFATVCCSKSSSAVVHCSRLVFIAICAAAVHRRKRHREDLRCSRVSLLYSRGSNAIKTSATAVKTFVFCREDYTVKLLRRRCTQECIFAPYFPFDDPQKFAIVHKVFGVSNISKMLQELPLHQRADAVSSLVYEANLRVRDPMYGCVGTISYLQNQVSQLKTQLAMAQTEIMCIQMQQDYSTNLSTQIDHYQDDNKSLVLSDNNYESCNINHNLADHHHHHQYLSFASSSSSSSNVIQDPFMRESFWT 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2222 273 ProSiteProfiles LOB domain profile. 95 196 IPR004883 -
Prci6g2222 273 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 100 237 - -
Prci6g2222 273 Coils Coil 175 195 - -
Prci6g2222 273 Pfam Lateral organ boundaries (LOB) domain 101 193 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2222 Prci-Chr6 31108051 31126227 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2222 101 273 AS2 family AT2G30130 58.564 1.87e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci6g2222 LOB 1.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2222 - - pcin:129314068 530.02