Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2209 ATGGAGGAAGATCCTTCTTCAACTATTTTAGATGCTGAAGTTGTCGGGATCAGATTTAGTCTGGCTACATGTCATGAAATTTGTACAGCATCCATCAATGACTCTTCAATTAGCCATGCTAGTCAGCTGTCAAATCCATTTCTTGGGTTACCCCTTGAATTTGGAAGATGTGAATCTTGTGGAACTTCTGAAGCTGGAAAATGTGAAGGTCACTTTGGATATATTAAGCTACCAGTTCCAATATACCATCCAAGTCATATTAGTGAATTGAAGAAGATGCTGAGCTTGTTGTGCTTAAACTGCTTGAAAATGAAAACATACAAGAATCCAGTGGCAAGCAATGGTTTAGCGCAGAAGTTTTTGGCAAAATGTTGTGGGAATCCTAATGCTTCACAAGTTACTATTCGGGAGGTTAAAACAACAGACGGTGCTTGTTACTTGGAATTGAAGGTGTCTAAGTCAAAAATGTGTCCTGGCTTTTGGGGATTTTTGGAAAAATATGGCTATCGCTATGAAAGCAACAATACTCGAGCTTTGCTTCCTTATGAGGTCATGGAAATTATCAAAAGAATACCTCCAGAGACCAGAAAAAAACTTGTTGGAAAAGGCTATTTCCCCCAAGAAGGATATGTCTTGAAGTATCTTCCAGTACCCCCAAACTGTTTGTCTGTGCCAGAAGTTTCAGATGGTATGAGTGTCCTATCTTCGGATCCTTCCATGACAGTGCTAAGAAAAATGCTTAGGAAGGCAGAAATTATAACGAATTCGAGATCTGGCAATCCGAACTTTGAGTCTCATCAAGTGGAAGCAGCTGACTTGCAGTCAATTGTTTCTCAGTATCTTCAAGTTAGGGGTACTTCTAAGGCAGCACGTGATATTGAGACACATTACGGGGTCAATAAAGAACTCAATGAATCTACAACAAAAGCATGGATGGAGAAGATGAGAACTTTGTTCATCAGAAAGGGTTCTGGATTTTCTTCAAGGAGTGTGATAACTGGGGAATCTTACAAAAAGATAAGTGAAATTGGAATTCCCCTTGAAGTTGCCCAAAGGATAACATTTGAGGAAAGGGTTAACTCTCATAACATAAATTATTTACAGGAACTGGTGGATCAAAATTTGTGTCTAACCTACAGAGAAGGCTTGTCAACCTATTCGCTTAGGGAGAGTTCAAAGGGGCATATATATCTTAAACCTGGTCAGATAGTTCATCGAAGGATAATGGATGGTGATATTGTCTTTATTAACAGGCCCCCTACGACACACAAGCACTCACTTCAAGCGCTTTCAGTATATATCCATGATGACCACACTGTGAAGATAAATCCCCTTATTTGTGGACCTCTGGGTGCTGATTTTGATGGTGACTGTATACACTTGTTTTATCCTCAGTCATTGGCTGCCAAAGCAGAGGTCTTGGAGCTTTTCTCTCTGGAAAAACAGCTGCTCAGTTCTCACAGTGGAAATCTTAATTTGCAGCTTACTAGTGATTCACTATTGTCACTGAAAATGTTGTTTAAGAGATACTTTTTGGCTAAAATGGAAACTCATCAGTTAGCCATGTTCATCTCACCATCATTGCCAAAACCTGCTCTTGTAAAAGCCTATTCTGAAGGTCCTTATTGGACTGCTGTGCAAATGTTGCAATCTGTGCTGCCATCTAGTTTTGACTGCACTGGGGACAAGTACTTGATTTCTCAAAGCGAAATCTTGAGGTTTGATTTTAGTAGAGATATTCTTTCTACAATGATAAATGAAATTGCAGCCTCAATTTTCTTTGGAAAGGGTCCTGGGGAGGTAATGAGATTCTTCAATGTTTTACAACCATTTTTGATGGAAAGTTTATTTGTGGAAGGGTTTAGTGTTAGTTTGAAAGACTTTTTCATGTATGGGGAAGCCATGAGAAGCATTAAAAGGAGCATTGGTACACAAGACATTTTGCTGAAACAATTAAGGTCAATTTACAATGAATTGGTGCAACAGCAATTGGAGAAGTATATTCAAGATGTGAAGCAACCAATTATTAATTTTATTTTGAAGTCAGGTCTTGGTGATTTGATTGACTCAAAGAGTGAGTCTGCTATTGATAAGTTGGTTCAGCAGATTGGATTCTTAGGCATGCAGCTTTCAGATAGGGGGAAATTTTATTCAAAGACATTGGTTGAGGACGTGGCCTCACATTTCAATGGTAAATATTATGATAGGATTGATTATCCCTCTGCAGAGTTTGGATTACTCAAGGGATGCTTTCTGCATGGCTTAGACCCATATGAAGAGATGGTGCATTCTATCTCAACTAGAGAGATACTTGTGCGCTCTTCTAGAGGGCTATCTGAACCAGGAACATTGTTTAAGAATTTGATGGCCATCCTCCGGGATGTTGTTATTTGCTATGATGGCACTGTGAGAAATGTTTGTAGCAATTCTGTCATTCAATTTGAATATGGAGTAAAAGCTGGAGATAAGTCCCAACTTTTATTCCCTCCTGGCGAGCCAGTAGGTGTCTTAGCTGCAACTGCCATGTCAAATCCTGCTTACAAGGCAGTCCTTGATGCTAGTCCTAACAGTAACTCTTCGTGGGAATTGATGAAGGAAATATTGGTTTGCAAGGTAAGTTTTAAGAATGAGCCAATTGATCGGCGTGTAATTTTGTACTTGAATGATTGTGGTTGTGGAAAGTTGTATTGCCGAGAAAATGCAGCTTATCTGGTTAAAAATCAATTGAGAAAAGTCAGTCTTAAAGAGGTGGCAGATGAGGTTGTGATTGAATACCAAAGTCAGAGAACTTGCAACGAGAGTCCTGAGACTGATGCAGGCCTTGTTGGTCATATTTTTCTCAATAAGATGATGTTGGAGGAGAAGAAGATCAATATGGCTGAGGTGGTCCAAAGATGCCAAGAAACTCTCAAGCCATATTATAAGAAGAAGAAACTTGGTCATATTTTTAAGAAGACAGAACTATTTTTCAGTGAGTCTTCTGCACCATGCGTGTCATTTATTTGGCGAGATGGAGATGCTATTGATGATTTAGAGAAAACTGTGTACATTTTGGCTGAGGTTATTTGCCCTGTTCTTTTAGAAACAATAATCAAAGGAGATGCCTGCATTAGCTCCGCAAGCATTATCTGGGTTAATTCGGATTCAAATATGTGGGTGCATAACCCCAGCAAATCTCCAAAAGGCGAACTGGCATTGGACATCATTCTTGAGAAGAAGGCTGTAAAGCAAAATGGTGATGCATGGAGGATTGTACTTGACTCATGCCTTCCTGTCCTTCATTTAATTGATACCACACGTTCGATTCCATATGCAATTAAGCAAGTTGAGGAATTGTTGGGGATTTCATGTGTTTTTGATCAAGTGATTCGGCGTCTTGCATTATCTGTAAAAATGGTTGCAAAAGGTGTTCTCAGGGAGCATCTGCTTCTCTTGGCAAGTAGCATGACCTGTGGTGGGAGTTTAGTTGGATTCAACACAGGCGGCTACAAGGCTCTGGGTAAACAGTTAAAGATTCAAATTCCATTTACTGATGCAACACTATTTACACCTAAAAAATGTTTTGAGCGGGCTGCTGAGAAATGTCACACAGATGCCTTATCAAGCATTGTTGCATCCTGTTCCTGGGGTAAACGTGTAGCTGTTGGCACAGGATCTAGATTTGAAGTCCTATGGGATGCAAAAGAGGTAAAATCTAATGATATTGGTTTGGATGTATACAACTTTTTGCATATGATGAGAAGTACTGCACAAGATGAAGTAAACAATAACGGATGTTTGGGAGAGGATGTTGATGATATGTTTGTGGAGGATTGGGAATTGTCACCAGAGCATGCCTCTGGTACAGATGCCGTGTTTGAAACGTATGAGGGTGGGTCTGAAAGACCACAAGAGGATTCTTGGAGCGCTGGTAAGTGGGGAGAAAAACCAAATGATGATGATCCTGCAGCAAGGAAGACAAATGGTTGGTCATCTTGGACAAAAAGTAAACCCGAAACAGGAGATGTTGGATCGGATAGAGCAGAAGATGATTCTTGGAACTCTAGTAAGTGGACAGAGAAACCAAATAATGATGATTCTGTGACAAGAAAGTCTGGTGGCTGGTCATCTTGGATGAAAAATAAACCAGAAACAGGAGGCATTGGTTCTGAAAGAGCAGAAGATTCTGGGAGCTTTGGTAAGTTGACTGCAAAACCTAATGATGATGATTCCACAGTAGTAAAGTCAAGTGGTTGGTCTTCTCGGGCTAAAAATAAACCTGAAACAGGAAATATTGGTTGTGAAAGGGCAGAAGATGATTCTTTGAGCTTTGGTAACTGGACAGCAAAACAAGATGATGATTCTACAGTTAAGTCAAGTGGTTGGTTGACTGGGGCCAAAAATAAACCTGAAACAGGTTCTAAAAGAGTGAATGATGATTCTTGGAGCTCTGGCAAGCAGGAAGCAAAGCTAAATGATGACTCTACAGTAAGAAAGCCAGGTGGTTGGTCATCTTGGACAGAAAATATACCTGAAAAAGGAGACATTGGTTCTGGAAAAGCAGATGATTCTTGGGGCTTTGGTAAGCAGACTGCAAAGTCAAATGATGATGATTCTACATTAAGGAAGACGAGTGGTTGGTCATCTTGGACAAACAAACCAGAAGCAGGAGACATTGGCTCTCTCGAAAAAGCAGAAAATGACTCTTGGAACTCTGGTAAATGGAAAGCAAAACCAAGTCATGAAGATTCTATAGCAGGAAAGTCTAGCAGTTGGTCATCTGGGACTAAAAATAAACCTGAAACAGGAGACATTGGTCCTCCTGAAAGAGCAGAAGATGACTCTTGGAACTCTAGTAAATGGAAAGCAAAACCAAGTCATGATGATTCTATAGCAGGAAAGTCAGGTGGTTGGTCATCTGGGACAAAAAATAAACCTGAAACAGTAGATATCGGTTCTGAAAGGGTAGAAAATGATTCTTGGAGCTCTGGTAAGTGGTCAGCAAAGCCAAAAGATGATGATTCTACAGTAACAAAGTCAAGTGACTGGTCATCTTGGTCAAAAAATAAATCTGAAACTAGAGTCATTGGTTCTGAAAGGGCAGAAGATGATTCTCGGAGCTCTGATAAGTGGACAGCGAAGCCAAATGATGATGATTCTACAGTAAACAAGTCAAGTGGATGGTCATCTTGGACAAAAAGTAAACCCGAAGCAGGAGACATTGGTTCTGAAAGAGCAAAAGATGATTCTTGGGGCAAGAATGATGGCCATGCTTCACTTGACCAAGATAACAATTGCTCTTGGGGAAGATCCAAGTCCCCATCAAGCCAGGGTTGGGGTGGAAGTTCTCGTGGATGGGATTCCCAAAATGCTACAGCTAACGATAGTGACAGAGATCAATGGGGAAAGCAGAGTAGGGAATTGTTCAAGAAAAATCCTTCTGATGGGTCACAAGGTTGGGGTTCCCATGCTGGAGAACGGAAAAACAGGACTCGCCCTCCCAGAACACCCGGGGCAAATCGTGAGACCAATGTAGGTGGACTATATACGGCAACCAGACAGAGATTGGATATGTTCACTTCTGAGGAACAGGATATTCTCAAAGATATTGAACCAATCATGCAGAACATTAGACGGATAATGCAACAAACTGGGTACAATGATGGGGACCCTCTAGCAGCTGATGATCAAACTTTTGTGATTGAGAATGTCTTTGAACACCATCCAGATAAAGCAGCCAAAATGGGTGCAGGGATTGATCATGTGATGGATCTCTCATCGGGGAGGATGATTGGCAATGCTGAGGAGTGTGATGGGCTCTACTACTTTGATGAATCAACCGTTAGCAGGCACAGCAATTTCCAAGACAGCAGGTGCTTCTATTTGGTACTGAAAGATGGTCAGAAGCAAGATTTTTCATACCGGAAGTGTCTGGATAACTTTTTGAAGACAAAATACCCGGAGTTGGCTGAAGAATTTGTTGGCAAATATTTCAGAAAAAGGAGGGAACAACAGAACCCAGCTCCAACAAACGATGAAAAAGCCTAG 6027 0.4073 MEEDPSSTILDAEVVGIRFSLATCHEICTASINDSSISHASQLSNPFLGLPLEFGRCESCGTSEAGKCEGHFGYIKLPVPIYHPSHISELKKMLSLLCLNCLKMKTYKNPVASNGLAQKFLAKCCGNPNASQVTIREVKTTDGACYLELKVSKSKMCPGFWGFLEKYGYRYESNNTRALLPYEVMEIIKRIPPETRKKLVGKGYFPQEGYVLKYLPVPPNCLSVPEVSDGMSVLSSDPSMTVLRKMLRKAEIITNSRSGNPNFESHQVEAADLQSIVSQYLQVRGTSKAARDIETHYGVNKELNESTTKAWMEKMRTLFIRKGSGFSSRSVITGESYKKISEIGIPLEVAQRITFEERVNSHNINYLQELVDQNLCLTYREGLSTYSLRESSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALSVYIHDDHTVKINPLICGPLGADFDGDCIHLFYPQSLAAKAEVLELFSLEKQLLSSHSGNLNLQLTSDSLLSLKMLFKRYFLAKMETHQLAMFISPSLPKPALVKAYSEGPYWTAVQMLQSVLPSSFDCTGDKYLISQSEILRFDFSRDILSTMINEIAASIFFGKGPGEVMRFFNVLQPFLMESLFVEGFSVSLKDFFMYGEAMRSIKRSIGTQDILLKQLRSIYNELVQQQLEKYIQDVKQPIINFILKSGLGDLIDSKSESAIDKLVQQIGFLGMQLSDRGKFYSKTLVEDVASHFNGKYYDRIDYPSAEFGLLKGCFLHGLDPYEEMVHSISTREILVRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSVIQFEYGVKAGDKSQLLFPPGEPVGVLAATAMSNPAYKAVLDASPNSNSSWELMKEILVCKVSFKNEPIDRRVILYLNDCGCGKLYCRENAAYLVKNQLRKVSLKEVADEVVIEYQSQRTCNESPETDAGLVGHIFLNKMMLEEKKINMAEVVQRCQETLKPYYKKKKLGHIFKKTELFFSESSAPCVSFIWRDGDAIDDLEKTVYILAEVICPVLLETIIKGDACISSASIIWVNSDSNMWVHNPSKSPKGELALDIILEKKAVKQNGDAWRIVLDSCLPVLHLIDTTRSIPYAIKQVEELLGISCVFDQVIRRLALSVKMVAKGVLREHLLLLASSMTCGGSLVGFNTGGYKALGKQLKIQIPFTDATLFTPKKCFERAAEKCHTDALSSIVASCSWGKRVAVGTGSRFEVLWDAKEVKSNDIGLDVYNFLHMMRSTAQDEVNNNGCLGEDVDDMFVEDWELSPEHASGTDAVFETYEGGSERPQEDSWSAGKWGEKPNDDDPAARKTNGWSSWTKSKPETGDVGSDRAEDDSWNSSKWTEKPNNDDSVTRKSGGWSSWMKNKPETGGIGSERAEDSGSFGKLTAKPNDDDSTVVKSSGWSSRAKNKPETGNIGCERAEDDSLSFGNWTAKQDDDSTVKSSGWLTGAKNKPETGSKRVNDDSWSSGKQEAKLNDDSTVRKPGGWSSWTENIPEKGDIGSGKADDSWGFGKQTAKSNDDDSTLRKTSGWSSWTNKPEAGDIGSLEKAENDSWNSGKWKAKPSHEDSIAGKSSSWSSGTKNKPETGDIGPPERAEDDSWNSSKWKAKPSHDDSIAGKSGGWSSGTKNKPETVDIGSERVENDSWSSGKWSAKPKDDDSTVTKSSDWSSWSKNKSETRVIGSERAEDDSRSSDKWTAKPNDDDSTVNKSSGWSSWTKSKPEAGDIGSERAKDDSWGKNDGHASLDQDNNCSWGRSKSPSSQGWGGSSRGWDSQNATANDSDRDQWGKQSRELFKKNPSDGSQGWGSHAGERKNRTRPPRTPGANRETNVGGLYTATRQRLDMFTSEEQDILKDIEPIMQNIRRIMQQTGYNDGDPLAADDQTFVIENVFEHHPDKAAKMGAGIDHVMDLSSGRMIGNAEECDGLYYFDESTVSRHSNFQDSRCFYLVLKDGQKQDFSYRKCLDNFLKTKYPELAEEFVGKYFRKRREQQNPAPTNDEKA 2008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2209 2008 Gene3D RNA polymerase ii 354 406 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1289 1840 - -
Prci6g2209 2008 Pfam RNA polymerase Rpb1, domain 5 754 1164 IPR007081 GO:0003677|GO:0003899|GO:0006351
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1686 1710 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1534 1548 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1465 1488 - -
Prci6g2209 2008 Gene3D RNA polymerase Rpb1, domain 3 487 622 IPR042102 -
Prci6g2209 2008 Gene3D RNA polymerase II, clamp domain 10 119 IPR044893 -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1731 1749 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1596 1622 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1350 1372 - -
Prci6g2209 2008 Gene3D - 322 486 - -
Prci6g2209 2008 Gene3D - 1859 1976 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1626 1640 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1577 1593 - -
Prci6g2209 2008 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 9 1227 - -
Prci6g2209 2008 Pfam RNA polymerase Rpb1, domain 2 325 477 IPR000722 GO:0003677|GO:0003899|GO:0006351
Prci6g2209 2008 PANTHER DNA-DIRECTED RNA POLYMERASE 18 1225 IPR045867 GO:0003899|GO:0006351
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1750 1791 - -
Prci6g2209 2008 SMART rpolaneu7 208 507 IPR006592 GO:0003677|GO:0003899|GO:0006351
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1711 1726 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1437 1460 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1562 1576 - -
Prci6g2209 2008 Pfam Protein of unknown function (DUF3223) 1878 1971 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1301 1316 - -
Prci6g2209 2008 Pfam RNA polymerase Rpb1, domain 1 37 281 IPR007080 GO:0003677|GO:0003899|GO:0006351
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1402 1420 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1318 1332 - -
Prci6g2209 2008 MobiDBLite consensus disorder prediction 1333 1349 - -
Prci6g2209 2008 Pfam RNA polymerase Rpb1, domain 3 482 627 IPR007066 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2209 Prci-Chr6 30305475 30329738 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2209 K16251 - gmx:100785844 2373.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g2209 6 30305475 30329738 Prci6g2209 6 30305475 30329738 ECH