Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2147 ATGAGGAAGAAACTTGATACCCGTTTTCCTGCTGCTCGGATAAAGAAGATAATGCAAGCAGATGAAGATATTGGAAAAATAGCACTAGCAGTGCCTGTTTTAGTCTCAAAAGCTCTCGAGCTATTTTTACAAGATCTTTGTGACCATACTTATGATATAACTCTTCGTAGAGGAGCAAAGACCATGAGTGCATTGCATTTGAAGCATTGTGTACAAAGCTACAATGTTTTTGATTTTCTGAGGGATGTCGTGAGCAGGGTTCCTGACTATAGTCAAGGGTGTGGGCATGGTCATTCTGAATCTGGTGCTGATGATCGGGTTGTTTCAAAGAGAAGGAAAGCTGCTGGTTATAATCACAGCGACAGTGATGAGGAATCTAAGAGGAGCAAGATGCATGAGTTGAACCACACAGGCAATACTGGAAGGGGAAGGGGAAGAGGTCGAGGTAGGGGAAGAGGTCGAGGTAGGGGCGCTCGAATTGTCGAAAGAGATAACTATCATCAGGAGGTTGAACCTGAGCCTTGCACCTTTTTTCAACAGAGCATCAAACATAATCCAAACACAAGTGTGATAGAGGAAAATGGTTCAGCTTATCCAAAAAAAGAAGAAAATGGTTCAGAGTTAAAGGAGTCACGGAAGGAAAATACTGTAGTTCCTGGTGAAGAAGGATCTCAGTCTCTCACTAATGTTGATTTGAACTCCAAAACTAATGAAAATGTAGGCAAAAATGCTGGCACAACTGCTCATGCCTCAGAGCCTGAACCTGCAACTGAGACCGAGCATGAAGATATCCCTGGCTGGTCCATTTCTGACATCGACAAGATGGCCATTGACTCTATGCAGCTTGTGCAGCTTGGTAGACGATTAGAAGAGGAAGAGGAAGATTATGATGAGGAAGGGTAA 903 0.433 MRKKLDTRFPAARIKKIMQADEDIGKIALAVPVLVSKALELFLQDLCDHTYDITLRRGAKTMSALHLKHCVQSYNVFDFLRDVVSRVPDYSQGCGHGHSESGADDRVVSKRRKAAGYNHSDSDEESKRSKMHELNHTGNTGRGRGRGRGRGRGRGRGARIVERDNYHQEVEPEPCTFFQQSIKHNPNTSVIEENGSAYPKKEENGSELKESRKENTVVPGEEGSQSLTNVDLNSKTNENVGKNAGTTAHASEPEPATETEHEDIPGWSISDIDKMAIDSMQLVQLGRRLEEEEEDYDEEG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2147 300 MobiDBLite consensus disorder prediction 91 267 - -
Prci6g2147 300 MobiDBLite consensus disorder prediction 174 194 - -
Prci6g2147 300 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Prci6g2147 300 MobiDBLite consensus disorder prediction 218 253 - -
Prci6g2147 300 MobiDBLite consensus disorder prediction 196 217 - -
Prci6g2147 300 MobiDBLite consensus disorder prediction 99 139 - -
Prci6g2147 300 SUPERFAMILY Histone-fold 4 89 IPR009072 GO:0046982
Prci6g2147 300 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Prci6g2147 300 Coils Coil 282 300 - -
Prci6g2147 300 FunFam dr1-associated corepressor homolog 1 86 - -
Prci6g2147 300 MobiDBLite consensus disorder prediction 155 170 - -
Prci6g2147 300 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2147 Prci-Chr6 28607220 28613884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2147 1 289 CCAAT-HAP5 Transcription Factor Family AT3G12480 47.059 4.85e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Prci6g2147 CBFD_NFYB_HMF 2.4e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2147 K21752 - gmx:100810093 360.918