Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2118 ATGATGGAATCATCAAAACCCCTTATTCCCACTCCTGGATTTCTGATTGCCTTCTTCATAGTCATGATCTGTACTTTCATCAGACCAAGTACTTGTCTAGCATCAAACTACGTTGGAGATGACTGCCATAACAAAGCCCCACAAGCTCTTAGTGACTTATACAAAGCCAACCTTGACCAGCTCCTTTCGTTGCTCTCCACCGATGCTGCTGCCACCAACAAAGGCTACAACCACACTGCCATCGGCAACGCCACCAACACCGTCTACGGCCTCTATGACTGCCGTGGCGATGACCCCGGCTACCTCTGCCAGTTCTGTGTCTCCACTGCCACCAGAGAGCTTCTCCAACGCTGTCCCAATCACCCTTCTGCCGCAATATGGTACAGCTACTGCATCGTCCGATACTCCAATGAGAACTTCTTCGGAAAGGTGATGATGAGCCCATTATGGTCCATGGAGGGAACGACGAAGATGTCGGATCCGACGGAGTGGAAGAAGGCAGAAAGTTACATAAGGAGTCTGATGGGACGAGCGACGGAGAAGACAAAGGAATTGAATGCATGGGGAGAGTTTGATCTAGGAGGTGGAAGAAGAAGGCATGCGTTGGTACAATGTAGTAGAGACCTTGACAGAAAGAGTTGCAGGCAATGTTTGGAGGCTTTGATGAATAACGTTACTCAGTGTTGTGAGCAGAAGCAAGGATGGCACGTTGGGACCCCAAGTTGTATAATCAAATACAACGATTACATGTTCTATCAGTCACCCTCTTCTCAAAATCCTACTACAGCCAATGATGGCGCTGGCAAGTCCAAATTCTTGATCATAAGCGTAAGTTTATTAGTGGCTGTGCCTATACTAAGCATTTCTGTCTACTTATGGCGGAGGAAGACTAGAAAAGATCAAACGCGCTTGGAAGGCGCTCCTATGTTTTATGATTTTCCTCGAAGAGAGAGATCATTGAACACAGATCTTCCCACAATCCCTCTGCATGTGATTCAACAGAGCACTAATCACTTCTCAGAAGATTCTAAATTGGGAGAAGGTGGATTTGGTACTGTTTATAAGGGAACATTGCCAGATGGGAAGGAAATTGCGGTTAAAAGACTCTCAAAAGCATCAGGTCAAGGTTCAAAGGAGTTCAAGAATGAAGTGATATTCATAGCAAAGTTGCAACATAGAAACCTTGTTAGGCTCTTGGGTTGTTGCATAGAGAAAAATGAGAAGCTACTTGTATATGAATACATGCCAAATTCTAGCCTTGACTTCCACCTTTTCAGTGAAGAAAAGAGGAAGAAATTAGATTGGAATCAAAGATTAAATATTATCAATGGGATTGCAAAAGGACTTTTGTATCTTCATGAAGACTCTCGACTAAGAGTGGTTCATAGAGATTTGAAAGCTAGCAACGTCCTTTTGGACAATAAAATGAATCCTAAAATATCAGATTTTGGATTGGCAAGGACCTTTGAAGGAGCCCAAAATGAAGGAAATACAAAACGAGTGATTGGTACTTATGGTTATATGGCTCCAGAGTATGCTATGGAAGGATTATTTTCAGTGAAATCAGATGCTTTTAGTTTTGGAGTTCTTTTGCTAGAAATCATATGTGGAAAAAAGATTTGCAGTTTCTATCTCTCTGAGCATGGCCAAAGTCTTCTAATTTATACTTGGAATTTGTGGTGCAAAGGAAAATGTTTGGAATTGATGGACCCGGTGTTAGAAGATTCATATATAGAAAATGAAGTTTTGAAGTGCGTACACATTGGTTTACTTTGTGTTCAAGAAGATCCAGATGATAGACCAATTATGTCTACTGTCGTACTCATGCTTGCAAGTGACACAATGACATTACCGAATCCTAATCCTCCTGCTTTTTCAAGAAGAAAGTCCCTGGAAGATCAGTCATCTACTTCTAGAACTTTCAACGATGCTTCTGTTAATGAGATGACAGTGTCTCACCTCACACCAAGATGA 1974 0.422 MMESSKPLIPTPGFLIAFFIVMICTFIRPSTCLASNYVGDDCHNKAPQALSDLYKANLDQLLSLLSTDAAATNKGYNHTAIGNATNTVYGLYDCRGDDPGYLCQFCVSTATRELLQRCPNHPSAAIWYSYCIVRYSNENFFGKVMMSPLWSMEGTTKMSDPTEWKKAESYIRSLMGRATEKTKELNAWGEFDLGGGRRRHALVQCSRDLDRKSCRQCLEALMNNVTQCCEQKQGWHVGTPSCIIKYNDYMFYQSPSSQNPTTANDGAGKSKFLIISVSLLVAVPILSISVYLWRRKTRKDQTRLEGAPMFYDFPRRERSLNTDLPTIPLHVIQQSTNHFSEDSKLGEGGFGTVYKGTLPDGKEIAVKRLSKASGQGSKEFKNEVIFIAKLQHRNLVRLLGCCIEKNEKLLVYEYMPNSSLDFHLFSEEKRKKLDWNQRLNIINGIAKGLLYLHEDSRLRVVHRDLKASNVLLDNKMNPKISDFGLARTFEGAQNEGNTKRVIGTYGYMAPEYAMEGLFSVKSDAFSFGVLLLEIICGKKICSFYLSEHGQSLLIYTWNLWCKGKCLELMDPVLEDSYIENEVLKCVHIGLLCVQEDPDDRPIMSTVVLMLASDTMTLPNPNPPAFSRRKSLEDQSSTSRTFNDASVNEMTVSHLTPR 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2118 657 Pfam Salt stress response/antifungal 50 137 IPR002902 -
Prci6g2118 657 Pfam Salt stress response/antifungal 166 249 IPR002902 -
Prci6g2118 657 Pfam Domain of unknown function (DUF3403) 612 657 IPR021820 GO:0004674
Prci6g2118 657 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Prci6g2118 657 Gene3D - 149 251 IPR038408 -
Prci6g2118 657 Gene3D - 35 140 IPR038408 -
Prci6g2118 657 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 55 656 - -
Prci6g2118 657 SMART serkin_6 339 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2118 657 Gene3D Phosphorylase Kinase; domain 1 313 414 - -
Prci6g2118 657 FunFam Cysteine-rich receptor-like protein kinase 28 38 139 - -
Prci6g2118 657 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Prci6g2118 657 FunFam Liguleless narrow1 415 618 - -
Prci6g2118 657 CDD STKc_IRAK 345 610 - -
Prci6g2118 657 SUPERFAMILY Protein kinase-like (PK-like) 323 634 IPR011009 -
Prci6g2118 657 Pfam Protein tyrosine and serine/threonine kinase 342 607 IPR001245 GO:0004672|GO:0006468
Prci6g2118 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Prci6g2118 657 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 310 414 - -
Prci6g2118 657 ProSiteProfiles Gnk2-homologous domain profile. 146 251 IPR002902 -
Prci6g2118 657 ProSiteProfiles Protein kinase domain profile. 339 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2118 657 Gene3D Transferase(Phosphotransferase) domain 1 415 618 - -
Prci6g2118 657 MobiDBLite consensus disorder prediction 618 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2118 Prci-Chr6 28302668 28310420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2118 15 657 Receptor kinase-like Gene Family AT4G05200 39.734 6.80e-164 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci6g2118 PK_Tyr_Ser-Thr 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2118 - - gmx:100795922 776.933