Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2111 ATGGCAGAGGTCATGAACATGCCTCTTGATTCTCTCGACAAATCTCCCTCCGCTTCTGCTTCAGTTTCACCGCCGCAGGCCCCGGCCCCAGCGTCAGCTGATGACGATCTCCCCCCGCCGCCGCCGCTATCTTCTCTTCCTCTTGCTCCACATTCTTCATCCCGGAGAAAGGAGAGAGATTCCAGGGATAGGCGGGATGATAGGGATTTCGATCGGCATCCAAATCGCCGTGGGGGTGATTACTACGATAGGAACATCTCGCCGCCGGCGCCTCCTCTCAGAGACAGAGATATGGACTTTAAGCGCCGCCGTAGCCCTAGCCCTTCGTATCGCGACCGACGTTATTCTCCTCCGCGGCGCTCTCCTCCACCATATAAGCGACTGAGAAGGGGGAGTCCCCGAGGCGGTTATGGACCCGATGACAGGCTTGGCTATGATTATTTTGGCGGCTATGGACGAGGTGTGGGTGGAAGGCCTGGTTATGCAGAAGAGAGGTCTTTTGGAAGGTTCACCCATCGATCAATGGGTGCATATCAAAATGGGATTCCAGAACTAGAATCAAATCGTGCTTGTGCAGACTTACCAATCAGTGGTGCACAAAGGGAAGGGTTAATGTCCTACAAGCAATTTATTCAAGAGCTTGAGGATGATGTATTACCAGCTGAAGCAGAGCGTAGGTATCAGGAGTATAAGTCAGAATACATTTCAACCCAGAAACTGGCTTATTTTAATGCTCACAAGAATGAAGAGTGGTTGCGAGATAAATATCATCCAACAAATTTGGTTGCAGTCATTGATAGGAGGAATGAAAATGCACGACGGCTGGCGAAGGATTTCTTGCTCAATCTGCAGAGTGGAACACTAGACCTGAATCCTGGTTTAAATGCTTCATCTGGCAAACTAGGGGGAGCAAGTGAGCCAAATTCGGAGGAGGAAGTGGACACTGGTGGTAAACGAAGGCAGCATGGTAGGCGACCTAATGAAGAAAATGATTTCCTGGCTGCTCCGAAGGCTCACCTGATAAGTTCTGAATCTAGACGAATGCAAGCAGATGTTGAGCAGGCTCAGGCACTTGTACATAAGCTTGATGCTGAAAAGGGGATTGAAGATAATATTTTATCCAGCAGTGATCACAACAAAAATGAAGATAAACCTTGCAGTGGATGTTTGGGTCCCATAATAATTGTACGGGGTTTAACATCTGTTAAGGGATTAGAAGGTGTTGAGCTCTTGGATACAATTCTTACTTATCTTTGGCGGATTCATGGGGTTGATTATTATGGCATGATTGAGACCAATGAGCCTAAGGGTCTTAGGCATGTGAGGCCAGAATTAACAGGCCATGAAGAATCGAGTAAATCAGGGTCCGATTGGGAAGAAAAACTTGATTCATTCTGGCAGGGAAGGTTGAGTGGTCAGGATCCTTTGGAAATAATGACAGCTAAGGAGAAGATTGATGCTGCAGCAGTTGAAGTGTTAGATCCATATGTTAGAAAAATCAGGGACGAAAAGTATGGATGGAAGTATGGTTGTGGAGCCAAGGGCTGTACAAAGCTTTTCCATGCTGCTGAATTTGTGCACAAACATCTTAAATTAAAACATCCAGAGCTTGTAAATGAGTTAACATTGAAAGTGCGTGAGGAGCTCTATTTTCAAAACTACATGAATGACCCAGATGCTCCTGGCGGAACACCTATCATGCAGCTACCACAGAAGGACAAACCTATAGGACACAGATTACCTCTAGAAGGACGATTGAGAGATGATCGTGGCAATCGACGAGACCATGAAAGAAGTGACAGAATGGATGATGGTGATAGGCCCTATAACTCCCCATCTCATGGGATGGGAAATCATGATGAAACTATGTATGATTCATATGCTGGAGCTGCCGTTTCTTCATTTACCTCAGATATGCCGCCACCTCCGCCAGTCTTGATGCCTGTACCTGGTGCCGGGCCATTGGGACCCTTTGTTCCTGCTCCCCCCGAAGTTGCTATGCAGATGTTAAGAGAGCAAGGAGGAGCATCTTCATATGATGCCTCTGGAAGGAAAATGCAGTCTGGCTCTCATGTTGGGGGACCAGCACCAATAATTGCTGTTCCCCCAGCTTTTAGACCTGATCCCCGTCGGATGCGAAGTTATCAAGATCTGGATGTTCCAGAGGATGAAGTCACTGTGATAGACTATCGGAGTTTGTAG 2202 0.4723 MAEVMNMPLDSLDKSPSASASVSPPQAPAPASADDDLPPPPPLSSLPLAPHSSSRRKERDSRDRRDDRDFDRHPNRRGGDYYDRNISPPAPPLRDRDMDFKRRRSPSPSYRDRRYSPPRRSPPPYKRLRRGSPRGGYGPDDRLGYDYFGGYGRGVGGRPGYAEERSFGRFTHRSMGAYQNGIPELESNRACADLPISGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKLAYFNAHKNEEWLRDKYHPTNLVAVIDRRNENARRLAKDFLLNLQSGTLDLNPGLNASSGKLGGASEPNSEEEVDTGGKRRQHGRRPNEENDFLAAPKAHLISSESRRMQADVEQAQALVHKLDAEKGIEDNILSSSDHNKNEDKPCSGCLGPIIIVRGLTSVKGLEGVELLDTILTYLWRIHGVDYYGMIETNEPKGLRHVRPELTGHEESSKSGSDWEEKLDSFWQGRLSGQDPLEIMTAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVNELTLKVREELYFQNYMNDPDAPGGTPIMQLPQKDKPIGHRLPLEGRLRDDRGNRRDHERSDRMDDGDRPYNSPSHGMGNHDETMYDSYAGAAVSSFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGASSYDASGRKMQSGSHVGGPAPIIAVPPAFRPDPRRMRSYQDLDVPEDEVTVIDYRSL 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2111 733 Pfam SERRATE/Ars2, N-terminal domain 208 289 IPR021933 -
Prci6g2111 733 MobiDBLite consensus disorder prediction 677 718 - -
Prci6g2111 733 MobiDBLite consensus disorder prediction 311 332 - -
Prci6g2111 733 MobiDBLite consensus disorder prediction 52 80 - -
Prci6g2111 733 ProSitePatterns Zinc finger C2H2 type domain signature. 511 534 IPR013087 -
Prci6g2111 733 MobiDBLite consensus disorder prediction 561 621 - -
Prci6g2111 733 MobiDBLite consensus disorder prediction 576 608 - -
Prci6g2111 733 MobiDBLite consensus disorder prediction 31 47 - -
Prci6g2111 733 Coils Coil 345 365 - -
Prci6g2111 733 Pfam Arsenite-resistance protein 2 451 630 IPR007042 -
Prci6g2111 733 MobiDBLite consensus disorder prediction 1 141 - -
Prci6g2111 733 MobiDBLite consensus disorder prediction 12 26 - -
Prci6g2111 733 PANTHER ARSENITE-RESISTANCE PROTEIN 2 55 731 IPR039727 GO:0006397
Prci6g2111 733 MobiDBLite consensus disorder prediction 94 119 - -
Prci6g2111 733 MobiDBLite consensus disorder prediction 294 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2111 Prci-Chr6 27428515 27437230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2111 74 733 C2H2 Transcription Factor Family AT2G27100 60.496 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2111 K27103 - gmx:100811300 989.564