Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2110 ATGGCAGAGGTCATGAACATGCCTCTTGATTCTCTCGACAAATCTCCCTCCGCTTCTGCTTCAGTTTCACCGCCGCAGGCCCCGGCCCCAGCGTCAGCTGATGACGATCTCCCCCCGCCGCCGCCGCTATCTTCTCTTCCTCTTGCTCCACATTCTTCATCCCGGAGAAAGGAGAGAGATTCCAGGGATAGGCGGGATGATAGGGATTTCGATCGGCATCCAAATCGCCGTGGGGGTGATTACTACGATAGGAACATCTCGCCGCCGGCGCCTCCTCTCAGAGACAGAGATATGGACTTTAAGCGCCGCCGTAGCCCTAGCCCTTCGTATCGCGACCGACGTTATTCTCCTCCGCGGCGCTCTCCTCCACCATATAAGCGACTGAGAAGGGGGAGTCCCCGAGGCGGTTATGGACCCGATGACAGCAGGCTTGGCTATGATTATTTTGGCGGCTATGGACGAGGTGTGGGTGGAAGGCCTGGTTATGCAGAAGAGAGGTCTTTTGGAAGGTTCACCCATCGATCAATGGGTGCATATCAAAATGGGATTCCAGAACTAGAATCAAATCGTGCTTGTGCAGACTTACCAATCAGTGGTGCACAAAGGGAAGGGTTAATGTCCTACAAGCAATTTATTCAAGAGCTTGAGGATGATGTATTACCAGCTGAAGCAGAGCGTAGGTATCAGGAGTATAAGTCAGAATACATTTCAACCCAGAAACTGGCTTATTTTAATGCTCACAAGAATGAAGAGTGGTTGCGAGATAAATATCATCCAACAAATTTGGTTGCAGTCATTGATAGGAGGAATGAAAATGCACGACGGCTGGCGAAGGATTTCTTGCTCAATCTGCAGAGTGGAACACTAGACCTGAATCCTGGTTTAAATGCTTCATCTGGCAAACTAGGGGGAGCAAGTGAGCCAAATTCGGAGGAGGAAGTGGACACTGGTGGTAAACGAAGGCAGCATGGTAGGCGACCTAATGAAGAAAATGATTTCCTGGCTGCTCCGAAGGCTCACCTGATAAGTTCTGAATCTAGACGAATGCAAGCAGATGTTGAGCAGGCTCAGGCACTTGTACATAAGCTTGATGCTGAAAAGGGGATTGAAGATAATATTTTATCCAGCAGTGATCACAACAAAAATGAAGATAAACCTTGCAGTGGATGTTTGGGTCCCATAATAATTGTACGGGGTTTAACATCTGTTAAGGGATTAGAAGGTGTTGAGCTCTTGGATACAATTCTTACTTATCTTTGGCGGATTCATGGGGTTGATTATTATGGCATGATTGAGACCAATGAGCCTAAGGGTCTTAGGCATGTGAGGCCAGAATTAACAGGCCATGAAGAATCGAGTAAATCAGGGTCCGATTGGGAAGAAAAACTTGATTCATTCTGGCAGGGAAGGTTGAGTGGTCAGGATCCTTTGGAAATAATGACAGCTAAGGAGAAGATTGATGCTGCAGCAGTTGAAGTGTTAGATCCATATGTTAGAAAAATCAGGGACGAAAAGTATGGATGGAAGTATGGTTGTGGAGCCAAGGGCTGTACAAAGCTTTTCCATGCTGCTGAATTTGTGCACAAACATCTTAAATTAAAACATCCAGAGCTTGTAAATGAGTTAACATTGAAAGTGCGTGAGGAGCTCTATTTTCAAAACTACATGAATGACCCAGATGCTCCTGGCGGAACACCTATCATGCAGCTACCACAGAAGGACAAACCTATAGGACACAGATTACCTCTAGAAGGACGATTGAGAGATGATCGTGGCAATCGACGAGACCATGAAAGAAGTGACAGAATGGATGATGGTGATAGGCCCTATAACTCCCCATCTCATGGGATGGGAAATCATGATGAAACTATGTATGATTCATATGCTGGAGCTGCCGTTTCTTCATTTACCTCAGATATGCCGCCACCTCCGCCAGTCTTGATGCCTGTACCTGGTGCCGGGCCATTGGGACCCTTTGTTCCTGCTCCCCCCGAAGTTGCTATGCAGATGTTAAGAGAGCAAGGAGGAGCATCTTCATATGATGCCTCTGGAAGGAAAATGCAGTCTGGCTCTCATGTTGGGGGACCAGCACCAATAATTGCTGTTCCCCCAGCTTTTAGACCTGATCCCCGTCGGATGCGAAGTTATCAAGATCTGGATGTTCCAGAGGATGAAGTCACTGTGATAGACTATCGGAGTTTGTAG 2205 0.4726 MAEVMNMPLDSLDKSPSASASVSPPQAPAPASADDDLPPPPPLSSLPLAPHSSSRRKERDSRDRRDDRDFDRHPNRRGGDYYDRNISPPAPPLRDRDMDFKRRRSPSPSYRDRRYSPPRRSPPPYKRLRRGSPRGGYGPDDSRLGYDYFGGYGRGVGGRPGYAEERSFGRFTHRSMGAYQNGIPELESNRACADLPISGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKLAYFNAHKNEEWLRDKYHPTNLVAVIDRRNENARRLAKDFLLNLQSGTLDLNPGLNASSGKLGGASEPNSEEEVDTGGKRRQHGRRPNEENDFLAAPKAHLISSESRRMQADVEQAQALVHKLDAEKGIEDNILSSSDHNKNEDKPCSGCLGPIIIVRGLTSVKGLEGVELLDTILTYLWRIHGVDYYGMIETNEPKGLRHVRPELTGHEESSKSGSDWEEKLDSFWQGRLSGQDPLEIMTAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVNELTLKVREELYFQNYMNDPDAPGGTPIMQLPQKDKPIGHRLPLEGRLRDDRGNRRDHERSDRMDDGDRPYNSPSHGMGNHDETMYDSYAGAAVSSFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGASSYDASGRKMQSGSHVGGPAPIIAVPPAFRPDPRRMRSYQDLDVPEDEVTVIDYRSL 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2110 734 Pfam SERRATE/Ars2, N-terminal domain 209 290 IPR021933 -
Prci6g2110 734 MobiDBLite consensus disorder prediction 52 80 - -
Prci6g2110 734 MobiDBLite consensus disorder prediction 562 622 - -
Prci6g2110 734 MobiDBLite consensus disorder prediction 295 332 - -
Prci6g2110 734 MobiDBLite consensus disorder prediction 678 719 - -
Prci6g2110 734 MobiDBLite consensus disorder prediction 577 609 - -
Prci6g2110 734 Coils Coil 346 366 - -
Prci6g2110 734 Pfam Arsenite-resistance protein 2 452 631 IPR007042 -
Prci6g2110 734 MobiDBLite consensus disorder prediction 31 47 - -
Prci6g2110 734 ProSitePatterns Zinc finger C2H2 type domain signature. 512 535 IPR013087 -
Prci6g2110 734 MobiDBLite consensus disorder prediction 1 144 - -
Prci6g2110 734 PANTHER ARSENITE-RESISTANCE PROTEIN 2 55 732 IPR039727 GO:0006397
Prci6g2110 734 MobiDBLite consensus disorder prediction 12 26 - -
Prci6g2110 734 MobiDBLite consensus disorder prediction 312 332 - -
Prci6g2110 734 MobiDBLite consensus disorder prediction 94 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2110 Prci-Chr6 27428510 27437230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2110 74 734 C2H2 Transcription Factor Family AT2G27100 60.496 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2110 K27103 - gmx:100811300 993.03