Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2108 ATGCTTGTACACTTGAATATAATCAGGCAGCAAATTGTTATTCTGATCATGGATATAGATCTTAGGTTACCTTCTGGTGAGCATGATAAAGAGGATGAAGAGCCAAATACGATTGATAACATATTGGATGGTGACGAAAAATTGCATAATGTAGACATAGAAGGAAGAAATATAGTTGAAACTGGTGTACCTGCTCTAGATGGCGGGGATTTGAATTCACCAACTTCGGATATGGCAATATTTAAGGAAGATACAAATCTTGAACCACTTTCTGGCATGGAATTTGATTCTCATGGGGAAGCTTATTCTTTCTACCAAGAGTATGCTCGGTCAATGGGATTCAACACTGCAATTCAAAATAGTCGCCGTTCAAAAACATCTAGAGAATTTATCGATGCAAAGTTTGCTTGTTCCAGATATGGAACTAAACGGGAGTATGACAACAAATCATTCAATCGACCACGAGCAAGACAGAATAAGCAGGAGTCTGAAAATTCAACTGCCAGGAGATCTTGTTCAAAGACTGATTGTAAGGCAAGCATGCATGTAAAAAGGAGGTCAGATGGAAAATGGGTTATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCTGTCAGTGAGCAAGCAAGGAAAATGTATGCTGCTATGGCTAGACAGTTTGCTGAATACAAAACTGTAGTTGGTTTAAAGAATGAGAAAAGCCCATTCGATAAAGGTCGGAATTTAGGCCTGGAGACAGGGGACGTCAAACATCTGCTTGATTTTTTTATACAGATGCAAAACATGAATTCTAACTTCTTTTACGCTGTAGACCTTGGTGAGGATCAACGGGTGAAAAGCCTATTATGGCTTGATGCTAAATGCAGGCATGACTACATAAACTTTTGTGATGTAGTTTCTTTTGACACCACCTATGTGAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTAAATCAGCATTATCAATTTATGTTGCTTGGGTGTGCCTTGGTATCAGATGAAACTGCTGCAACTTATTCTTGGCTGATGCAGACGTGGCTGAAAGCAGTTGGAGGTCAAGTTCCAAAAGTGATAATTACTGACCATGACACGATACTCAAGTCAGTAATTTCTGATGTCTTGACCAGTGCCCATCATTGTATGTGCCTTTGGCACATATTGGGGAAAGTATCTGAAAATTTGGGTCATGTCATTAAACGACATGAGAATTTTATGGCAAAATTTGAAAAATGTATCCATAGATCATGGACGAGTGATGAGTTTGAGAAGAGGTGGTGGAAAATGGTAGATAGGTTTGAGCTCCGAGAGGATGATTGCATGCAGACAATGTACGAAGATTACAAGTTCTGGGTGCCAACATTCATGAAGGATGTATTTTTAGGTGGCATGTCTACTGTCCAGCGATCCGAAAGCATAAATTCCTTCTTTGATAAATATGTTCATAAGAAGACCTCTGTACAAGATTTTGTCAGACAGTATGAATCGATATTGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAACATTAAAAACTCCTTCACCTTTAGAGAAGAGTGTTGCAGGAATCTACACGCATGCAGTATTTAAGAAGATTCAGGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAGCTGAAAGACGAGATGAGGCAAGCATTACTTACAAGGTTCATGATATGGAAAGGAACCAAGAATTCACAGTTGCGTTGAATGAATTAAAATCAGAGGTGTCTTGTATATGTCGGTTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGATTGTTCTACAATATTCTCGCCTTTCAGCAATCCCTTCTCAGTATATTTTGAAAAGGTGGACAAGAGATGCAAAGTCAAGGCATTTACTTGGGGAGGAATCTGAACATATGCTGGCTAGGGTGCAACGGTACAATGATTTGTGTCAGAGAGCACTTAAACTGAGTGAAGAGGGATCGCTGTCTCAAGAAAGTTATAGCATGGCATTCCATGCGCTTCATGATGCATATGCAAATTGTGTGAGTGTCAATAATTCCAGTAAAGATCCTCCAGAAGCTGGCACATCAGCTGGTCATGGTCAGCTTTCAACTGAAGAAGATGCCCAGAGTAAAAATATGGGCAAGACAAACAGAAAGAAGAATCCAGCTAAAAAGAAAAAGATGAACTCTGATGCAGAAGTGATGACTGTTGGGGCTCAAGACAACTTGCAACAAATGGACAAGTTCAGCACGAGGGCTGTAACACTTGATGGTTATTATGGTGCTCAACAGAGTGTGCAGGGAATGTTAAACTTGATGGGACCAACTCGTGATAATTACTATGGAAATCAACAGACTATTCAGGGCCTGGGACAATTAAGTTCCATACCACCCAGCCACGATGGTTATTATGGCGCTCACCAGAGCATGCCTGGTCTGGCACAGCTAGATTTTTTTCGAGCATCAACAGGTTTTGCATATGGCATTCGGGATGATCCCAATGTAAGATCAGCACAGTTGCACGAGGATCCATCAAGGCATACATGA 2580 0.4016 MLVHLNIIRQQIVILIMDIDLRLPSGEHDKEDEEPNTIDNILDGDEKLHNVDIEGRNIVETGVPALDGGDLNSPTSDMAIFKEDTNLEPLSGMEFDSHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDNKSFNRPRARQNKQESENSTARRSCSKTDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQARKMYAAMARQFAEYKTVVGLKNEKSPFDKGRNLGLETGDVKHLLDFFIQMQNMNSNFFYAVDLGEDQRVKSLLWLDAKCRHDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFMLLGCALVSDETAATYSWLMQTWLKAVGGQVPKVIITDHDTILKSVISDVLTSAHHCMCLWHILGKVSENLGHVIKRHENFMAKFEKCIHRSWTSDEFEKRWWKMVDRFELREDDCMQTMYEDYKFWVPTFMKDVFLGGMSTVQRSESINSFFDKYVHKKTSVQDFVRQYESILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGIYTHAVFKKIQVEVIGAVACHPKAERRDEASITYKVHDMERNQEFTVALNELKSEVSCICRLFEYKGYLCRHALIVLQYSRLSAIPSQYILKRWTRDAKSRHLLGEESEHMLARVQRYNDLCQRALKLSEEGSLSQESYSMAFHALHDAYANCVSVNNSSKDPPEAGTSAGHGQLSTEEDAQSKNMGKTNRKKNPAKKKKMNSDAEVMTVGAQDNLQQMDKFSTRAVTLDGYYGAQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPPSHDGYYGAHQSMPGLAQLDFFRASTGFAYGIRDDPNVRSAQLHEDPSRHT 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2108 859 SMART 26again6 594 621 IPR006564 GO:0008270
Prci6g2108 859 MobiDBLite consensus disorder prediction 695 721 - -
Prci6g2108 859 Pfam SWIM zinc finger 584 617 IPR007527 GO:0008270
Prci6g2108 859 ProSiteProfiles Zinc finger SWIM-type profile. 583 619 IPR007527 GO:0008270
Prci6g2108 859 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 82 691 IPR031052 GO:0006355
Prci6g2108 859 Pfam MULE transposase domain 303 395 IPR018289 -
Prci6g2108 859 MobiDBLite consensus disorder prediction 695 743 - -
Prci6g2108 859 Pfam FAR1 DNA-binding domain 103 206 IPR004330 -
Prci6g2108 859 MobiDBLite consensus disorder prediction 146 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2108 Prci-Chr6 27361367 27382504 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci6g2108 FAR1 2.5e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2108 - - gmx:100817034 1457.58