Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2105 ATGGATATAGATCTTAGGTTACCTTCTGGTGAGCATGATAAAGAGGATGAAGAGCCAAATACGATTGATAACATATTGGATGGTGACGAAAAATTGCATAATGTAGACATAGAAGGAAGAAATATAGTTGAAACTGGTGTACCTGCTCTAGATGGCGGGGATTTGAATTCACCAACTTCGGATATGGCAATATTTAAGGAAGATACAAATCTTGAACCACTTTCTGGCATGGAATTTGATTCTCATGGGGAAGCTTATTCTTTCTACCAAGAGTATGCTCGGTCAATGGGATTCAACACTGCAATTCAAAATAGTCGCCGTTCAAAAACATCTAGAGAATTTATCGATGCAAAGTTTGCTTGTTCCAGATATGGAACTAAACGGGAGTATGACAACAAATCATTCAATCGACCACGAGCAAGACAGAATAAGCAGGAGTCTGAAAATTCAACTGCCAGGAGATCTTGTTCAAAGACTGATTGTAAGGCAAGCATGCATGTAAAAAGGAGGTCAGATGGAAAATGGGTTATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCTGTCAGTGAGCAAGCAAGGAAAATGTATGCTGCTATGGCTAGACAGTTTGCTGAATACAAAACTGTAGTTGGTTTAAAGAATGAGAAAAGCCCATTCGATAAAGGTCGGAATTTAGGCCTGGAGACAGGGGACGTCAAACATCTGCTTGATTTTTTTATACAGATGCAAAACATGAATTCTAACTTCTTTTACGCTGTAGACCTTGGTGAGGATCAACGGGTGAAAAGCCTATTATGGCTTGATGCTAAATGCAGGCATGACTACATAAACTTTTGTGATGTAGTTTCTTTTGACACCACCTATGTGAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTAAATCAGCATTATCAATTTATGTTGCTTGGGTGTGCCTTGGTATCAGATGAAACTGCTGCAACTTATTCTTGGCTGATGCAGACGTGGCTGAAAGCAGTTGGAGGTCAAGTTCCAAAAGTGATAATTACTGACCATGACACGATACTCAAGTCAGTAATTTCTGATGTCTTGACCAGTGCCCATCATTGTATGTGCCTTTGGCACATATTGGGGAAAGTATCTGAAAATTTGGGTCATGTCATTAAACGACATGAGAATTTTATGGCAAAATTTGAAAAATGTATCCATAGATCATGGACGAGTGATGAGTTTGAGAAGAGGTGGTGGAAAATGGTAGATAGGTTTGAGCTCCGAGAGGATGATTGCATGCAGACAATGTACGAAGATTACAAGTTCTGGGTGCCAACATTCATGAAGGATGTATTTTTAGGTGGCATGTCTACTGTCCAGCGATCCGAAAGCATAAATTCCTTCTTTGATAAATATGTTCATAAGAAGACCTCTGTACAAGATTTTGTCAGACAGTATGAATCGATATTGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAACATTAAAAACTCCTTCACCTTTAGAGAAGAGTGTTGCAGGAATCTACACGCATGCAGTATTTAAGAAGATTCAGGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAGCTGAAAGACGAGATGAGGCAAGCATTACTTACAAGGTTCATGATATGGAAAGGAACCAAGAATTCACAGTTGCGTTGAATGAATTAAAATCAGAGGTGTCTTGTATATGTCGGTTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGATTGTTCTACAATATTCTCGCCTTTCAGCAATCCCTTCTCAGTATATTTTGAAAAGGTGGACAAGAGATGCAAAGTCAAGGCATTTACTTGGGGAGGAATCTGAACATATGCTGGCTAGGGTGCAACGGTACAATGATTTGTGTCAGAGAGCACTTAAACTGAGTGAAGAGGGATCGCTGTCTCAAGAAAGTTATAGCATGGCATTCCATGCGCTTCATGATGCATATGCAAATTGTGTGAGTGTCAATAATTCCAGTAAAGATCCTCCAGAAGCTGGCACATCAGCTGGTCATGGTCAGCTTTCAACTGAAGAAGATGCCCAGAGTAAAAATATGGGCAAGACAAACAGAAAGAAGAATCCAGCTAAAAAGAAAAAGATGAACTCTGATGCAGAAGTGATGACTGTTGGGGCTCAAGACAACTTGCAACAAATGGACAAGTTCAGCACGAGGGCTGTAACACTTGATGGTTATTATGGTGCTCAACAGAGTGTGCAGGGAATGTTAAACTTGATGGGACCAACTCGTGATAATTACTATGGAAATCAACAGACTATTCAGGGCCTGGGACAATTAAGTTCCATACCACCCAGCCACGATGGTTATTATGGCGCTCACCAGAGCATGCCTGGTCTGGCACAGCTAGATTTTTTTCGAGCATCAACAGGTTTTGCATATGGCATTCGGGATGATCCCAATGTAAGATCAGCACAGTTGCACGAGGATCCATCAAGGCATACATGA 2532 0.4028 MDIDLRLPSGEHDKEDEEPNTIDNILDGDEKLHNVDIEGRNIVETGVPALDGGDLNSPTSDMAIFKEDTNLEPLSGMEFDSHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDNKSFNRPRARQNKQESENSTARRSCSKTDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQARKMYAAMARQFAEYKTVVGLKNEKSPFDKGRNLGLETGDVKHLLDFFIQMQNMNSNFFYAVDLGEDQRVKSLLWLDAKCRHDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFMLLGCALVSDETAATYSWLMQTWLKAVGGQVPKVIITDHDTILKSVISDVLTSAHHCMCLWHILGKVSENLGHVIKRHENFMAKFEKCIHRSWTSDEFEKRWWKMVDRFELREDDCMQTMYEDYKFWVPTFMKDVFLGGMSTVQRSESINSFFDKYVHKKTSVQDFVRQYESILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGIYTHAVFKKIQVEVIGAVACHPKAERRDEASITYKVHDMERNQEFTVALNELKSEVSCICRLFEYKGYLCRHALIVLQYSRLSAIPSQYILKRWTRDAKSRHLLGEESEHMLARVQRYNDLCQRALKLSEEGSLSQESYSMAFHALHDAYANCVSVNNSSKDPPEAGTSAGHGQLSTEEDAQSKNMGKTNRKKNPAKKKKMNSDAEVMTVGAQDNLQQMDKFSTRAVTLDGYYGAQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPPSHDGYYGAHQSMPGLAQLDFFRASTGFAYGIRDDPNVRSAQLHEDPSRHT 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2105 843 Pfam MULE transposase domain 287 379 IPR018289 -
Prci6g2105 843 MobiDBLite consensus disorder prediction 1 20 - -
Prci6g2105 843 MobiDBLite consensus disorder prediction 679 705 - -
Prci6g2105 843 Pfam SWIM zinc finger 568 601 IPR007527 GO:0008270
Prci6g2105 843 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 66 675 IPR031052 GO:0006355
Prci6g2105 843 MobiDBLite consensus disorder prediction 679 727 - -
Prci6g2105 843 ProSiteProfiles Zinc finger SWIM-type profile. 567 603 IPR007527 GO:0008270
Prci6g2105 843 SMART 26again6 578 605 IPR006564 GO:0008270
Prci6g2105 843 Pfam FAR1 DNA-binding domain 87 190 IPR004330 -
Prci6g2105 843 MobiDBLite consensus disorder prediction 130 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2105 Prci-Chr6 27361342 27377849 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci6g2105 FAR1 2.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2105 - - gmx:100817034 1457.58