Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2102 ATGTCATTCCTTCCTCTCTTCACTTCCCTTCTCTTTCTCTTCTTCCTCTTCTTCACACCACCACTGTTGCTCCTAGCTCAACCTCCTCCTCCTCCTCCTCCCCCCTCCGTAGCCTGCAAGTCCACATTATACCCAAAACTGTGTCGTTCCATTCTCTCAGCCATTCGTTACTCGCCATCAGATCCTTATTCACTTGGCAAGTTCTCAATCAAGCAAAGTCTAAAGCAAGCCAAGAAACTCGTCAAAGTGTTCAACAAATTCCTCAAAAAGCAAAGTCGCAATTCCTCTTCTTCTCCTCTTAACCGTGAAGAGACTGCTGCATTGATTGACTGCACGGAGCTAAACCAACTGAACGTCGGTTACTTGGAGTCCGTCAAGTCTGAGCTGAACACTGTGGAAGCATCAAGCCCGGAGCTTTTGAAGGAGATCCAGACATATCTCAGCGCAGTGGCGACCAACCACGACACTTGTTACGATGGGTTGGTGGCGGCCCAGAGTGGCATTGCCAAGGCACTGAATGTGCCATTGAACAATGTGACCAAACTATATAGTGTGTCGCTGGGGCTGGTCACTCACGCTCTGAATAGATACATGAAGAAGCATAAGGTTGGGAAACATGGTCTTCCTAGTCAGGCTAACAAGGTCAGGCAGCCACTTGAGAAGCTTGTCAAGCTTCTTCGGGGCAAGTATGGCAGCAACAGAAAGGAAAGGATAATGGAAGAGAGCCCATTAGAGGAAGGAATTCTGCTGAACGAGTTCATTGTTGTGAGCCCTTCAGGTTCAGACAACTTCACGTCCATCGGAGACGCCATTGCTGCTGCTCCGAGCAACACGAGGCCTCAAGATGGCTACTTCGTCATATACGCAAAAGAAGGATACTACGAGGAGTACGTTTTGGTGCCCATTCACAAGAAGAACGTCTTGCTTATTGGTGATGGCATTGGTCGCACTGTCATCACCGGCGATCACAGTGTCGTTGATGGTTGGACTACTTACAATTCCTCAACTTTTGCTGTGTCCGGCGATAGATTTGTAGCAGTGGACGTTACCTTCAGGAACACGGCAGGTCCCGAGAAGCACCAAGCAGTAGCAGTCAGGAACAACGCCGACCTCTCCATTTTCTATCGTTGCAGCTTCGAAGGTTACCAAGACACACTCTACGTCCACACTCTCCGCCAGTTCTACCGCGATTGCCTCATCTACGGCACTGTCGACTTCATCTTTGGCAACGCCGCGGCCGTCTTCCAGAACTGCAACATCCACACTCGAACCCCTCTACCTCGACAGAAGAACACCGTCACCGCTCAAGGCCGCATCGACCCCAACCAAAACACCGGCATCGCCATCCAAAACTGCACCTTTCTTTCCGATGACGATGACAATGCCAGTGGCAGCAACAGCTCGACACTCACCTACCTGGGCCGGCCGTGGAAGGAATATTCACGAACCGTGGTGATGGAGTCTTATATCGGAGACTTTGTTCAGCCTCGTGGGTGGTTAGAGTGGAATGGGACATTAGGGTTAGATACGTTGTTTTATGGTGAGTTTGGTAATTATGGTCCTGGGGCTATTACGAGTAAGAGAGTTCAATGGGGAGGGTATTATGTTTTGAATGCTGAAGAAGCTTTTAACTTTACTGTGTCTCAGTTTACATTGGGAGAGACATGGATTCCTTATGCTGATATACCTTTCAATGGAGGATTGTGA 1707 0.4915 MSFLPLFTSLLFLFFLFFTPPLLLLAQPPPPPPPPSVACKSTLYPKLCRSILSAIRYSPSDPYSLGKFSIKQSLKQAKKLVKVFNKFLKKQSRNSSSSPLNREETAALIDCTELNQLNVGYLESVKSELNTVEASSPELLKEIQTYLSAVATNHDTCYDGLVAAQSGIAKALNVPLNNVTKLYSVSLGLVTHALNRYMKKHKVGKHGLPSQANKVRQPLEKLVKLLRGKYGSNRKERIMEESPLEEGILLNEFIVVSPSGSDNFTSIGDAIAAAPSNTRPQDGYFVIYAKEGYYEEYVLVPIHKKNVLLIGDGIGRTVITGDHSVVDGWTTYNSSTFAVSGDRFVAVDVTFRNTAGPEKHQAVAVRNNADLSIFYRCSFEGYQDTLYVHTLRQFYRDCLIYGTVDFIFGNAAAVFQNCNIHTRTPLPRQKNTVTAQGRIDPNQNTGIAIQNCTFLSDDDDNASGSNSSTLTYLGRPWKEYSRTVVMESYIGDFVQPRGWLEWNGTLGLDTLFYGEFGNYGPGAITSKRVQWGGYYVLNAEEAFNFTVSQFTLGETWIPYADIPFNGGL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2102 568 CDD PMEI-like_3 38 192 - -
Prci6g2102 568 Pfam Pectinesterase 254 553 IPR000070 GO:0030599|GO:0042545
Prci6g2102 568 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Prci6g2102 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 193 IPR035513 -
Prci6g2102 568 PANTHER PECTINESTERASE 19 558 - -
Prci6g2102 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 192 IPR035513 -
Prci6g2102 568 Pfam Plant invertase/pectin methylesterase inhibitor 38 188 IPR006501 GO:0004857
Prci6g2102 568 FunFam Pectinesterase 249 568 - -
Prci6g2102 568 NCBIfam pectinesterase inhibitor domain 38 192 IPR006501 GO:0004857
Prci6g2102 568 Gene3D - 250 568 IPR012334 -
Prci6g2102 568 SMART PMEI_2 30 189 IPR006501 GO:0004857
Prci6g2102 568 SUPERFAMILY Pectin lyase-like 252 566 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2102 Prci-Chr6 27080891 27085723 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2102 1 568 Carbohydrate Esterase AT3G10720 55.105 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2102 K01051 - gmx:100808277 753.821