Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2098 ATGCAAGGAGGGTCAGGTCAAAACTCAAATCTTCCTTCTGGATCCATGGATAAGTCAAAGGTTTTAGATGTTAAACCTTTGCGCACTTTGGAACCTTTGTTCCCAAATTCAGCTCAGGCTGCTACCTTCGATGGCGCCTGTTCCACTGGGTTTTATTCCTTTTTCCCATTTGGTGCATCCCAAGGACCTCAAGCATCGCCTCCTAAGGTTCCCATGCCAACTCCAATACGGTCTTTTAGAAGCTCTGATACTGGAGAAGCAATCGCGGCTGAGTTTCCTGGAGCATCCAATGGAGAATATACTGATAGCCATGATCGTGCAGCACCAAACAAATCCAGATCCTCCAAAAAGAAGCCTAAGATAAGTCAAGATCTGCAAATTGATGCGAGTTCTTTATTTGGCATTAGCAAAAATGAACGTGAAGATGGTAGTCGGGAATTGGTTAATCTTATACTTATGACATTTGATGCGCTTAGGAGAAGGATCAGCCAGCTTGAGGATTCCAAGGAATTGACACTAGGATTGAGCAAGCGAGCGGATATGAGAGCTGGCAACATTTTGATGAGTGCAGGGATTCGAACAAACATGAGGAAAAGAATAGGAGTTGTGCCTGGGGTTGAGATTGGGGATATTTTCTTTTTCCGACTAGAATTATGTATTGTGGGTCTGCATAGTCAGTCTATGGGTGGGATTGACTACACAAATGTTGGTGGTAAGAATGAGTCTGAACCTGTGGCTTTAGCCATTGTTTCATCTGGAAAATATGATGACAATGCAGAGGATAGTGATATTTTGATCTATAGTGGTCAGGGTGGGGATAAGGGGGATGATCAGAAACTAGAAAGGGGTAATCTTGCTCTGGATAGAAGCTTGCGACAGAAGAACGTTGTCAGAGTAATACGGGGCATAAAGGATCAAATGAATTCAACTTCAAAGGTCTATATTTATGATGGGCTGTATAAAATCCAGGATTCATGGATAGAAAAGGGGAAATCTGGTGGTGGTGTATTCAAGTACAAGTTTGTGAGAGTGCCAGGGCAGCCCAGGGCGTTTGCTGCTTGGAAATCTATTGAAAAGTGGAAAGCTGGCATCACTTCTAGGACTGGGCTCATTCTTGCAGACCTCTCCTCGGGTGCTGAGAAAATTCCTGTGTCGCTTGTCAATGATGTTGATGATGAGAAAGCACCTGGTTATTTCACTTATCTCCATTCTCTTAGATATTCAAAATCCTTCATGGTTTCACATCCTTCTGATTATTGCAACTGTCAAAAAGATTGCAGTCCTGGTGATTTGAACTGCTCTTGTATTCAGAGAAATGAAGGTGATTTTCCATACACAGGGAATGGAATTCTAGTGAGTCGGAAGAAATTGGTTCATGAATGTGGCCCTTCATGTCAATGTTTTCCTAACTGCAAAGATCGTGTATCCCAAAATGGTTTAAAGTACCATATGGAAGTGTTCAAGACAAAGGATAAAGGATGGGGTCTTCGATCATTGGATCCCATTCGTGCAGGTACCTTCATTTGTGAGTATGCCGGAGAGGTTATTGACAGAGCCAAGGTAAGTTGGAATAGCAATAATGATGAGTATGTGTTTGACACAACTCGAAGTTATCATCCATTCAAGTGGAACTATGAACCTAAGTTACTCGAAGAATCTAGTTCAGATGATTCTAGTGAGGATTACAACATTCCATCTCCTCTAATTATTAGTGCCAAGAATGTTGGAAATGTGGCTAGGTTCATGAATCATAGTTGCTCCCCAAATGTCTTTTGGCAGCCAGTTTTATATGAAGAAAACAATCAACCCATTGTCCATATTTCTTTCTTTGCCCTTAAACACATTCCTCCACTGACAGAATTGACATATGATTATGGGATCACCCGTTCTGATTCTACTGTGGGTCACAGTGCACCCAGATGGAAAAAGAAATGCTTTTGTGGATCATCAAAATGCCAGGGTTCTTTTGGTTGA 1974 0.4189 MQGGSGQNSNLPSGSMDKSKVLDVKPLRTLEPLFPNSAQAATFDGACSTGFYSFFPFGASQGPQASPPKVPMPTPIRSFRSSDTGEAIAAEFPGASNGEYTDSHDRAAPNKSRSSKKKPKISQDLQIDASSLFGISKNEREDGSRELVNLILMTFDALRRRISQLEDSKELTLGLSKRADMRAGNILMSAGIRTNMRKRIGVVPGVEIGDIFFFRLELCIVGLHSQSMGGIDYTNVGGKNESEPVALAIVSSGKYDDNAEDSDILIYSGQGGDKGDDQKLERGNLALDRSLRQKNVVRVIRGIKDQMNSTSKVYIYDGLYKIQDSWIEKGKSGGGVFKYKFVRVPGQPRAFAAWKSIEKWKAGITSRTGLILADLSSGAEKIPVSLVNDVDDEKAPGYFTYLHSLRYSKSFMVSHPSDYCNCQKDCSPGDLNCSCIQRNEGDFPYTGNGILVSRKKLVHECGPSCQCFPNCKDRVSQNGLKYHMEVFKTKDKGWGLRSLDPIRAGTFICEYAGEVIDRAKVSWNSNNDEYVFDTTRSYHPFKWNYEPKLLEESSSDDSSEDYNIPSPLIISAKNVGNVARFMNHSCSPNVFWQPVLYEENNQPIVHISFFALKHIPPLTELTYDYGITRSDSTVGHSAPRWKKKCFCGSSKCQGSFG 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2098 657 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 60 651 - -
Prci6g2098 657 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 184 362 - -
Prci6g2098 657 MobiDBLite consensus disorder prediction 1 22 - -
Prci6g2098 657 Gene3D - 184 365 IPR036987 -
Prci6g2098 657 ProSiteProfiles Post-SET domain profile. 641 657 IPR003616 -
Prci6g2098 657 Gene3D SET domain 366 656 IPR046341 -
Prci6g2098 657 SMART preset_2 372 466 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci6g2098 657 SUPERFAMILY SET domain 382 654 IPR046341 -
Prci6g2098 657 Pfam SET domain 493 626 IPR001214 GO:0005515
Prci6g2098 657 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 59 657 IPR025794 GO:0016571
Prci6g2098 657 SMART set_7 482 632 IPR001214 GO:0005515
Prci6g2098 657 Pfam SAD/SRA domain 200 347 IPR003105 -
Prci6g2098 657 Pfam Pre-SET motif 376 474 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci6g2098 657 MobiDBLite consensus disorder prediction 1 16 - -
Prci6g2098 657 ProSiteProfiles Pre-SET domain profile. 418 479 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci6g2098 657 SMART G9a_1 196 347 IPR003105 -
Prci6g2098 657 MobiDBLite consensus disorder prediction 92 123 - -
Prci6g2098 657 SUPERFAMILY PUA domain-like 183 365 IPR015947 -
Prci6g2098 657 ProSiteProfiles SET domain profile. 482 626 IPR001214 GO:0005515
Prci6g2098 657 ProSiteProfiles YDG domain profile. 201 343 IPR003105 -
Prci6g2098 657 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2098 Prci-Chr6 26731945 26736247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2098 17 657 Su(var)3-9 homologs AT5G04940 52.794 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci6g2098 SAD_SRA 3.2e-44 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2098 K24405 - gmx:100812173 850.121