Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2086 ATGGCCAACCTTTGGTTTCATTTTTCCTTCTCGATGTTCTCACAGCTTTGCTGTCCCATTGTCTGCCCAATTTCATGTCAAACCAATTTCACTAGAAATGATGAACTGGCACTTCTTGCTTTCAAATTTTCTGTGAGAGACCCATTCAATCACTTGGCTAATTGGTCCAACTCTTCCTCCATTTGCAATTGGGTTGGGGTTACTTGTGATGCTAATGGTGAGAGAGTAAGGATGTTGAATCTTGCTCACATCAGTCTAATGGGCACCTTACCCTCACAAGTGGGGAATTTGTCCTCCCTTGTTGAACTTGATCTTCACAGTAACAACTTTCATGGTGAGTTACCAAAGGAGTTGCTGCAGTTACACAAGTTGACAATTCTCAACTTGAGCTCTAATGAACTTGATGGGAAGATTCCAACTTGGATTGGAAGTTTATTTTCTATTCAGCACCTGATCTTTCGTAATAATAGCTTTGGGGGTGTTATTCCTCCAAGTGTTTCGAATTTGTCAAAGTTAGAGAACTTGGATTGGAATGATAATTTTATCCATGGATCTATTCCACCGGAGATTGGAAGGCTTCAATGTAACCTTCCATCAGATTTTGGATGTGGCCTTCCTAATCTAGAGGAGCTATATTTATGGAGCAACAAACTTTTTGGGATAATGCCAAATACTATTTCCAATGCCTCAAAGCTGACCATTCTAGCATTGACAGAAAACAATTTCAAAGGGGTTTTACCAAGCACACTTGGGGATTTAAGATACTTGAAAAAACTTGGAATAGAGGAAAATCCATTTTATGTAAAACTTCCCAAGTCCATTGGAAACTTTTCTAATTCTCTACAAGAGTTGGACATCGTTTCTTTCTTGTGGTATCAATGCAACTTACAAGCTCTTCAATATTTGAGTCTTGAAGGCAATGACTTGCATGGCTTAATTGTTCATGAGCTTTGTGAAATCCAACCACTTGGTCATTTACATCTAAGTCGAAACAAGTTTTCTAGAGCAATGACATCTTGCTTCGGAAATCTTTCTTCTCTAAGAGAACTTCACTTTGGCTCTAATAAGTTGGGTTTAGAGATACCATCTTCCTTTTGGAATTTGAAAGACATATTGGAAGTAAACTTGTCTTCCAACCATTTTGTTGGGAATCTTTCATCAAGGGTTGAGAACTTAAAAGCTCTTTCTTTATTAGATTTATCTCAAAATCATATTTCAAGTAGCATTCCAACAACTATGGGTAGTTTGCAAAATCTGCAAATTCTCTCTCTTGCAGATAAAAAATTGCAAGGATCTATTCCTGGATCACTTGGGAATTTGCTAAATTTAGAAAATTTAGACCTTTCCCAAAATAATTTGTCTGGGAAGATTCCTAAATCTTTGGAGTTACTTATTGATCTTAAGTATGTCAATCTCTCTTATAACAAACTCCAAGGAGAGATTCCAGATGGAGGAGTTTTTAAAAATTTGACTCTTGAATCTTTTATGATGAATCTAGCTCTTTGTGGTCTACTGCAACTCCAAGTGCCTCCATGCAAAAAAGAAACAGGAGAAAGATTAACGACAAAATTGCTTTTATTGAAATGCATACTACCCATAGTTGTGTCAATAATTTTGGTTGTTTTAGGCATTATCCTTTTAAGGCTTAAACAACAAAATTCAAGGTGTCTAGTTGAAAGGGATTTATCAACTTTAGGAGTGCCAAGAAGGATTTCTTATTTTGAAATCCTAGAAGCAACCAATGGATTTGATGAGAGCAACATACTTGGAAGAGGTAGTTATGGTACTGTGTTCAAAGGAAAGCTTTCTAGTGGAATGGTTGTTGCAATTAAGATATTCAATTTTGACTCACAAGTAATAGTAGGGAGCTTTGAAAAAGAATGTGATGTACTGCATAATTTGCGCCATCACACTTTGGTGAAGGTTATAAGTTGTTGTTCTAATGTTGATTTCAAATCTTTAGTAATGGAATTCATGCCCAATGGGAGCCTTTAA 1995 0.3644 MANLWFHFSFSMFSQLCCPIVCPISCQTNFTRNDELALLAFKFSVRDPFNHLANWSNSSSICNWVGVTCDANGERVRMLNLAHISLMGTLPSQVGNLSSLVELDLHSNNFHGELPKELLQLHKLTILNLSSNELDGKIPTWIGSLFSIQHLIFRNNSFGGVIPPSVSNLSKLENLDWNDNFIHGSIPPEIGRLQCNLPSDFGCGLPNLEELYLWSNKLFGIMPNTISNASKLTILALTENNFKGVLPSTLGDLRYLKKLGIEENPFYVKLPKSIGNFSNSLQELDIVSFLWYQCNLQALQYLSLEGNDLHGLIVHELCEIQPLGHLHLSRNKFSRAMTSCFGNLSSLRELHFGSNKLGLEIPSSFWNLKDILEVNLSSNHFVGNLSSRVENLKALSLLDLSQNHISSSIPTTMGSLQNLQILSLADKKLQGSIPGSLGNLLNLENLDLSQNNLSGKIPKSLELLIDLKYVNLSYNKLQGEIPDGGVFKNLTLESFMMNLALCGLLQLQVPPCKKETGERLTTKLLLLKCILPIVVSIILVVLGIILLRLKQQNSRCLVERDLSTLGVPRRISYFEILEATNGFDESNILGRGSYGTVFKGKLSSGMVVAIKIFNFDSQVIVGSFEKECDVLHNLRHHTLVKVISCCSNVDFKSLVMEFMPNGSL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2086 664 SUPERFAMILY Protein kinase-like (PK-like) 564 664 IPR011009 -
Prci6g2086 664 ProSitePatterns Protein kinases ATP-binding region signature. 589 611 IPR017441 GO:0005524
Prci6g2086 664 Pfam Leucine Rich Repeat 123 145 IPR001611 GO:0005515
Prci6g2086 664 Pfam Leucine Rich Repeat 442 462 IPR001611 GO:0005515
Prci6g2086 664 ProSiteProfiles Leucine-rich repeat profile. 442 464 IPR001611 GO:0005515
Prci6g2086 664 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 31 192 - -
Prci6g2086 664 SUPERFAMILY L domain-like 204 507 - -
Prci6g2086 664 Pfam Leucine rich repeat 323 381 IPR001611 GO:0005515
Prci6g2086 664 Pfam Leucine rich repeat 206 265 IPR001611 GO:0005515
Prci6g2086 664 Gene3D Ribonuclease Inhibitor 31 192 IPR032675 -
Prci6g2086 664 ProSiteProfiles Protein kinase domain profile. 583 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2086 664 Gene3D Phosphorylase Kinase; domain 1 566 658 - -
Prci6g2086 664 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Prci6g2086 664 Gene3D Ribonuclease Inhibitor 288 519 IPR032675 -
Prci6g2086 664 Gene3D Ribonuclease Inhibitor 193 287 IPR032675 -
Prci6g2086 664 SMART LRR_typ_2 97 121 IPR003591 -
Prci6g2086 664 SMART LRR_typ_2 205 228 IPR003591 -
Prci6g2086 664 SMART LRR_typ_2 440 464 IPR003591 -
Prci6g2086 664 SMART LRR_typ_2 392 416 IPR003591 -
Prci6g2086 664 SMART LRR_typ_2 344 367 IPR003591 -
Prci6g2086 664 SMART LRR_typ_2 169 193 IPR003591 -
Prci6g2086 664 PRINTS Leucine-rich repeat signature 440 453 - -
Prci6g2086 664 PRINTS Leucine-rich repeat signature 395 408 - -
Prci6g2086 664 SUPERFAMILY L domain-like 33 286 - -
Prci6g2086 664 PANTHER OS04G0122200 PROTEIN 74 191 - -
Prci6g2086 664 FunFam Leucine-rich repeat receptor-like protein kinase TDR 193 514 - -
Prci6g2086 664 Pfam Protein kinase domain 584 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2086 Prci-Chr6 26055939 26064906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2086 34 664 Receptor kinase-like Gene Family AT3G47570 32.115 1.44e-96 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2086 Pkinase 7.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2086 - K13420 pcin:129314037 1263.83