Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2084 ATGTTAGAGGCCTTCAACCAATTCATGATGGCGAACCTTTGGTTTCATTTTTCCTTCTCCATGTTCTCACTGCTTTGCTATCTCATGGTCTGTCCAACTTTATGCCACACCATTTTCACCAAAAATGATGAATTGGCACTTCTTGCTCTCAAAAATTCTGTGAGAGACCCATTCAATCACTTGGCTAATTGGTCTAACTCTTTCTCCATTTGCAATTGGGTTGGGGTTACTTGTGATTCTAAAGGTGAGCGAGTAAGTGTATTGAATCTTGCTCACATGAGTCTCATGGGCACCTTACCCTCACAAGTGGGGAATTTGTCCTCCCTTGTTGAACTTGACCTTCATAGTAACAACTTTCATGGTGAGTTACCAAAGGAGTTGTTGCAGTTACATAAGTTGAGAATTCTCAACCTTAGCTATAATGAATTGGATGGGAAAATTCCTGCGTGGATTGGAAGTTTATTTGCTCTTCAATGCCTGAGCTTTCGAGATAATAGTTTTCGGGGTGTTATTCCTCCAAGCATATCAAATTTGTCAAAATTAGAGACCTTAGATTGGAGTCACAATTTCATCCATGGATCTATTCCACTTGAGATCGGAAGGCTTCAACATTTAAAGATTTTACGTATAGCAGGGAACAATCTTTCAAGAAATATACCTCCAACTATTTCTAGCTTATCCTCTCTTGAGTTGATGTCTTTGTCATTGAACTCCTTAAAAGGAGATATTCCAAATGAAATTGCCAATCTTTCAAATCTTAAAATTATGTCTTTGGCTCAAAATCAACTCATTGGCTACATACCTAGAAGCATTGGAAGTTTGGTTTCGCTTCAGGAATTAGATCTTGGTTTCAATAATTTACAAGGTGATATACCAAATGGTATTGGAAAATTGGATATGCTTCAAGTGCTAGGTCTTGAACATAATAATTTACAAGGTGATATACCTGAAGGAATTGGGAAATTGGATATGCTTCAAGAGCTATATCTTGATCATAATAATTTACAAGGAAGCATTCCCGAACAGATTGGTAATCTTAAAAGTCTAAAAATTTTATTTTTAGACACCAATATGTTTTCAAGCCAAATACCATCAACTATCTTTAATATATCTGGGTTGCAAGAGATTGATTTTAGTTGGAATAATTTGTCGGGAGGCATTCCCTCAAATATATGTCATGGCCTTCCAAATTTACAAGCTTTGGATCTTCAAGCCAACAAATTATTTGGAGCTATACCATCTGATTGGACACAATGCAAGGAACTCAAAGAGTTACAATTAGGAGACAACTTCTTCACAGGAAATATTCCTCAAACAATTGGTGGCCTCACAAACTTGAAAATTATATATCTACGTGCTAACAAGTTGTCTGGCCAGATACCAAGGAGTATTGAAAATTTGACAAAACTTCAAGAGCTAGACCTTAGTGGAAATAACATTGAAGGAAATATTCCTCAAACAATTGGTGACCTATCAAACTTGAAAATTATATCTATAGGTGCTAACAAGTTGTCCGGCCAAATACCAAGGAATATTGGAAAGTTGAAAAAACTTCAAGAACTAGACCTTAGTAGAAATAACATTGAAGGAGATATTCCCAAAGAGATTGGTAATCTTAAAAGTCTGGAAATTTTATATTTACACAGCAATAAGTTTTCTGCCCAAATACCATCGACTATCTTTAATATATCTGAGTTTCGGGATATTGATTTAAGTTGGAATAATTTGTCTGGAGGCATTCCTTCTAATATATGCAATGGACTTCCAAATTTACAATATTTGGCTCTTCAAGACAACAAATTATTTGGACCTATACCAGCTGGTTGGACACAATGCAAGGAGTTGGAAATAATAAGATTAAATAACAACTTATTCACAGGTCATATACCAAAAAGTATTGGAAACTTGACCATGCTTCAAGATTTAAATGTGAATTCCAATAGCTTGGAAGGTTTAATACCTATGGAAATAGGAAATCTCCATAAGCTTGAGATCTTAGATTTGTGGAATAACAAGTTGAGGGGATCTATTCCATCCAACATTTTTAACATTTCAACTTTGAGATACTTAAATCTTGGAAGCAATTCTATAACTGGCAATCTTCCATCAAATTTTGGGAATCTCACTAGTTGCTATGAACTATCCTTGGAAGAAAATGTTTTGACAGGATCAATTCCAAAAGTAATTGGTGGCTTACAAGATCTTCAATACTTGAGTCTTGAAGGCAATGAGCTACATGGCCTAATCATTGATGAGATATGTGAAATCACAAAGCTTGCCTATTTATTATTAAGTAGAAACAAGTTTTCTGGAGGAATACCACATTGTTTAGCAAATGTTACCTCTTTACGAGAACTTTACTTGGACTCTAATAAGTTAATTTTAGAAATACCCTCCTCCTTTTGGAATTTGAAGGATATATTGAAAGTAAACTTATCTTCCAATATTTTAGTTGGAAATGTATCATCAAATATTGGAAACTTAAATGCTCTTATATCCCTAGATTTGTCAAGAAATCATATTTCAGGCAATATTCCAACATCTTTGGGTGGACTAAAGAAGTTGCAAGATCTCTCCTTAGCACATAACAATTTGCAAGGAAATATTCCTAAATCATTTGGAAATATGTTGAGCTTAGTAAATTTGGACCTTTCTGAGAATAATTTATCTGGTGAGATTCCTAAATCCTTTGAGTCACTTACTTATCTTAAGTATATCAATCTCTCATATAACAAACTACAAGGAGAGATACCAAGTGGTGGAGTTTTTGCAAATTTAACTGCTGAATCTTTCATGATGAATGAAGCTCTTTGTGGCCATCCACAACTAAAAGTTCCTCATTGTGACAAAGGAAGAAGAAAACAGTCATGGGCAAAATCACTTTTACTAAAATGCATATTACCCATGGTTGTGTCAATAATTTTAATTGTCTTGGGCATTATCCTTTTCATCCATAGACGATCAAATTTAAGGGAACCAATTGAGAGCGGTTTATCCATTTTAGGATGGCCAAGGAGGATTTCTTATTTTGAAATTCTAGAAGCAACTAATGGATTTGATGAGAGTAACTTTCTTGGAAAGGGGAGTTATGGTGATGTGTTCAAAGGAAAGCTTTTGAATGGGATGATGGTTGCAATTAAAGTATTTAATTTTGAATCTGAAAAGATGTCAAGGAGCTTTGAAGTGGAATGCAACACAATGCGTAATGTGCGCCATTATAATTTGGTGAAGATCATAAGTAGTTGTTCTAATGTTGATTTTAAGTGTTTGATCATGGAGTTCATGCCTAAAGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTGGATTTTCTACAAAGGTTGAATATAATGATAAATGTAGCATCTGCTTTGGAGTATCTCCATCATGGCTTGTCAACACCGATAGTTCATTGCGATTTAAAGCCAAGTAACATTTTGTTAGATGATGATATGGTTGCTCATGTGAGTGACTTTGGGATTTCCAAACTTTTAGATGAAGGACAATCAAAAACACATACAGAGACGATACCTACAATTGGATATGTTTCACCTGAATATGGATCTACTGGAGTTGTTTCAACAAAAGTAGATGTGTATAGCTATGGAATTATGTTAATGGAAGTGTTCACAAGAAAAAAACCAACAGAAGATATGTTTGTCTCAGAATTGAATTTGAAGAGTTGGGTAAGTGACTCAATGCCACATGAAATAATTAATGTCATAGATTCCAATTTATTGCAGGGAGATGTTCAATATGCTGGTGATATATTGACTTCTACATCCAGTATTTTTGAATTGGCATTAAATTGTTGCATTGACTTTCCTGAAATGCGAAGCAGCATGACAGATGTTGTTGTGTCATTAAACAAGATCAAGAACATGATTATGCAAAAGCATCATCGTTGA 3915 0.3461 MLEAFNQFMMANLWFHFSFSMFSLLCYLMVCPTLCHTIFTKNDELALLALKNSVRDPFNHLANWSNSFSICNWVGVTCDSKGERVSVLNLAHMSLMGTLPSQVGNLSSLVELDLHSNNFHGELPKELLQLHKLRILNLSYNELDGKIPAWIGSLFALQCLSFRDNSFRGVIPPSISNLSKLETLDWSHNFIHGSIPLEIGRLQHLKILRIAGNNLSRNIPPTISSLSSLELMSLSLNSLKGDIPNEIANLSNLKIMSLAQNQLIGYIPRSIGSLVSLQELDLGFNNLQGDIPNGIGKLDMLQVLGLEHNNLQGDIPEGIGKLDMLQELYLDHNNLQGSIPEQIGNLKSLKILFLDTNMFSSQIPSTIFNISGLQEIDFSWNNLSGGIPSNICHGLPNLQALDLQANKLFGAIPSDWTQCKELKELQLGDNFFTGNIPQTIGGLTNLKIIYLRANKLSGQIPRSIENLTKLQELDLSGNNIEGNIPQTIGDLSNLKIISIGANKLSGQIPRNIGKLKKLQELDLSRNNIEGDIPKEIGNLKSLEILYLHSNKFSAQIPSTIFNISEFRDIDLSWNNLSGGIPSNICNGLPNLQYLALQDNKLFGPIPAGWTQCKELEIIRLNNNLFTGHIPKSIGNLTMLQDLNVNSNSLEGLIPMEIGNLHKLEILDLWNNKLRGSIPSNIFNISTLRYLNLGSNSITGNLPSNFGNLTSCYELSLEENVLTGSIPKVIGGLQDLQYLSLEGNELHGLIIDEICEITKLAYLLLSRNKFSGGIPHCLANVTSLRELYLDSNKLILEIPSSFWNLKDILKVNLSSNILVGNVSSNIGNLNALISLDLSRNHISGNIPTSLGGLKKLQDLSLAHNNLQGNIPKSFGNMLSLVNLDLSENNLSGEIPKSFESLTYLKYINLSYNKLQGEIPSGGVFANLTAESFMMNEALCGHPQLKVPHCDKGRRKQSWAKSLLLKCILPMVVSIILIVLGIILFIHRRSNLREPIESGLSILGWPRRISYFEILEATNGFDESNFLGKGSYGDVFKGKLLNGMMVAIKVFNFESEKMSRSFEVECNTMRNVRHYNLVKIISSCSNVDFKCLIMEFMPKGSLEKWLYSHNYCLDFLQRLNIMINVASALEYLHHGLSTPIVHCDLKPSNILLDDDMVAHVSDFGISKLLDEGQSKTHTETIPTIGYVSPEYGSTGVVSTKVDVYSYGIMLMEVFTRKKPTEDMFVSELNLKSWVSDSMPHEIINVIDSNLLQGDVQYAGDILTSTSSIFELALNCCIDFPEMRSSMTDVVVSLNKIKNMIMQKHHR 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2084 1304 Gene3D Ribonuclease Inhibitor 290 391 IPR032675 -
Prci6g2084 1304 Gene3D Ribonuclease Inhibitor 392 483 IPR032675 -
Prci6g2084 1304 Gene3D Ribonuclease Inhibitor 484 583 IPR032675 -
Prci6g2084 1304 Gene3D Ribonuclease Inhibitor 40 194 IPR032675 -
Prci6g2084 1304 Gene3D Ribonuclease Inhibitor 584 672 IPR032675 -
Prci6g2084 1304 SMART serkin_6 1019 1298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2084 1304 Pfam Protein kinase domain 1021 1287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2084 1304 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 392 588 - -
Prci6g2084 1304 FunFam Leucine-rich receptor-like protein kinase family protein 629 727 - -
Prci6g2084 1304 Pfam Leucine rich repeat 492 552 IPR001611 GO:0005515
Prci6g2084 1304 Pfam Leucine rich repeat 348 408 IPR001611 GO:0005515
Prci6g2084 1304 Pfam Leucine rich repeat 858 913 IPR001611 GO:0005515
Prci6g2084 1304 Pfam Leucine rich repeat 276 335 IPR001611 GO:0005515
Prci6g2084 1304 Pfam Leucine rich repeat 686 745 IPR001611 GO:0005515
Prci6g2084 1304 Pfam Leucine rich repeat 421 480 IPR001611 GO:0005515
Prci6g2084 1304 SUPERFAMILY RNI-like 88 409 - -
Prci6g2084 1304 Gene3D Phosphorylase Kinase; domain 1 1003 1094 - -
Prci6g2084 1304 FunFam Piriformospora indica-insensitive protein 2 198 292 - -
Prci6g2084 1304 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 40 197 - -
Prci6g2084 1304 FunFam Piriformospora indica-insensitive protein 2 293 389 - -
Prci6g2084 1304 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 730 952 - -
Prci6g2084 1304 SMART LRR_sd22_2 876 902 - -
Prci6g2084 1304 SMART LRR_sd22_2 395 424 - -
Prci6g2084 1304 SMART LRR_sd22_2 515 541 - -
Prci6g2084 1304 SMART LRR_sd22_2 322 348 - -
Prci6g2084 1304 SMART LRR_sd22_2 660 686 - -
Prci6g2084 1304 SMART LRR_sd22_2 852 871 - -
Prci6g2084 1304 SMART LRR_sd22_2 178 199 - -
Prci6g2084 1304 SMART LRR_sd22_2 274 308 - -
Prci6g2084 1304 SMART LRR_sd22_2 732 755 - -
Prci6g2084 1304 SMART LRR_sd22_2 780 806 - -
Prci6g2084 1304 SMART LRR_sd22_2 491 514 - -
Prci6g2084 1304 SMART LRR_sd22_2 250 269 - -
Prci6g2084 1304 SMART LRR_sd22_2 443 469 - -
Prci6g2084 1304 SUPERFAMILY Protein kinase-like (PK-like) 999 1291 IPR011009 -
Prci6g2084 1304 ProSitePatterns Protein kinases ATP-binding region signature. 1025 1047 IPR017441 GO:0005524
Prci6g2084 1304 SMART LRR_typ_2 852 875 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 828 851 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 395 419 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 588 612 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 202 226 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 274 298 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 443 466 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 780 803 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 106 130 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 876 899 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 515 538 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 539 563 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 660 684 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 322 345 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 467 491 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 900 925 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 636 659 IPR003591 -
Prci6g2084 1304 SMART LRR_typ_2 346 370 IPR003591 -
Prci6g2084 1304 FunFam Serine-threonine protein kinase plant-type 1002 1094 - -
Prci6g2084 1304 ProSiteProfiles Protein kinase domain profile. 1019 1304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2084 1304 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Prci6g2084 1304 Pfam Leucine Rich Repeat 132 154 IPR001611 GO:0005515
Prci6g2084 1304 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1095 1304 - -
Prci6g2084 1304 Gene3D Transferase(Phosphotransferase) domain 1 1095 1304 - -
Prci6g2084 1304 SUPERFAMILY RNI-like 338 650 - -
Prci6g2084 1304 Gene3D Ribonuclease Inhibitor 673 956 IPR032675 -
Prci6g2084 1304 SUPERFAMILY RNI-like 568 919 - -
Prci6g2084 1304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1138 1150 IPR008271 GO:0004672|GO:0006468
Prci6g2084 1304 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 556 1288 - -
Prci6g2084 1304 ProSiteProfiles Leucine-rich repeat profile. 517 539 IPR001611 GO:0005515
Prci6g2084 1304 Gene3D Ribonuclease Inhibitor 195 289 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2084 Prci-Chr6 25790873 25843256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2084 46 775 Receptor kinase-like Gene Family AT5G46330 37.263 3.17e-124 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2084 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2084 - K13420 mtr:25481440 1065.83