Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2083 ATGTTAGAGGCCTTCAACCAATTCATGATGGCGAACCTTTGGTTTCATTTTTCCTTCTCCATGTTCTCACTGCTTTGCTATCTCATGGTCTGTCCAACTTTATGCCACACCATTTTCACCAAAAATGATGAATTGGCACTTCTTGCTCTCAAAAATTCTGTGAGAGACCCATTCAATCACTTGGCTAATTGGTCTAACTCTTTCTCCATTTGCAATTGGGTTGGGGTTACTTGTGATTCTAAAGGTGAGCGAGTAAGTGTATTGAATCTTGCTCACATGAGTCTCATGGGCACCTTACCCTCACAAGTGGGGAATTTGTCCTCCCTTGTTGAACTTGACCTTCATAGTAACAACTTTCATGGTGAGTTACCAAAGGAGTTGTTGCAGTTACATAAGTTGAGAATTCTCAACCTTAGCTATAATGAATTGGATGGGAAAATTCCTGCGTGGATTGGAAGTTTATTTGCTCTTCAATGCCTGAGCTTTCGAGATAATAGTTTTCGGGGTGTTATTCCTCCAAGCATATCAAATTTGTCAAAATTAGAGACCTTAGATTGGAGTCACAATTTCATCCATGGATCTATTCCACTTGAGATCGGAAGGCTTCAACATTTAAAGATTTTACGTATAGCAGGGAACAATCTTTCAAGAAATATACCTCCAACTATTTCTAGCTTATCCTCTCTTGAGTTGATGTCTTTGTCATTGAACTCCTTAAAAGGAGATATTCCAAATGAAATTGCCAATCTTTCAAATCTTAAAATTATGTCTTTGGCTCAAAATCAACTCATTGGCTACATACCTAGAAGCATTGGAAGTTTGGTTTCGCTTCAGGAATTAGATCTTGGTTTCAATAATTTACAAGGTGATATACCAAATGGTATTGGAAAATTGGATATGCTTCAAGTGCTAGGTCTTGAACATAATAATTTACAAGGAGGTATTCCAAATGAAATTGCCAATCTTACGAGTCTTAAAATTATGTACTTGGGTTATAATCAACTCATTGGCTACATACCTACAAGCATTGGAAGTTTGGTTTTGCTTCAGGAATTAGATCTTGGTTCCAATAATTTACAAGGTGATATACCTGAAGGAATTGGGAAATTGGATATGCTTCAAGAGCTATATCTTGATCATAATAATTTACAAGGAAGCATTCCCGAACAGATTGGTAATCTTAAAAGTCTAAAAATTTTATTTTTAGACACCAATATGTTTTCAAGCCAAATACCATCAACTATCTTTAATATATCTGGGTTGCAAGAGATTGATTTTAGTTGGAATAATTTGTCGGGAGGCATTCCCTCAAATATATGTCATGGCCTTCCAAATTTACAAGCTTTGGATCTTCAAGCCAACAAATTATTTGGAGCTATACCATCTGATTGGACACAATGCAAGGAACTCAAAGAGTTACAATTAGGAGACAACTTCTTCACAGGAAATATTCCTCAAACAATTGGTGGCCTCACAAACTTGAAAATTATATATCTACGTGCTAACAAGTTGTCTGGCCAGATACCAAGGAGTATTGAAAATTTGACAAAACTTCAAGAGCTAGACCTTAGTGGAAATAACATTGAAGGAAATATTCCTCAAACAATTGGTGACCTATCAAACTTGAAAATTATATCTATAGGTGCTAACAAGTTGTCCGGCCAAATACCAAGGAATATTGGAAAGTTGAAAAAACTTCAAGAACTAGACCTTAGTAGAAATAACATTGAAGGAGATATTCCCAAAGAGATTGGCATTCCTTCTAATATATGCAATGGACTTCCAAATTTACAATATTTGGCTCTTCAAGACAACAAATTATTTGGACCTATACCAGCTGGTTGGACACAATGCAAGGAGTTGGAAATAATAAGATTAAATAACAACTTATTCACAGGTCATATACCAAAAAGTATTGGAAACTTGACCATGCTTCAAGATTTAAATGTGAATTCCAATAGCTTGGAAGGTTTAATACCTATGGAAATAGGAAATCTCCATAAGCTTGAGATCTTAGATTTGTGGAATAACAAGTTGAGGGGATCTATTCCATCCAACATTTTTAACATTTCAACTTTGAGATACTTAAATCTTGGAAGCAATTCTATAACTGGCAATCTTCCATCAAATTTTGGGAATCTCACTAGTTGCTATGAACTATCCTTGGAAGAAAATGTTTTGACAGGATCAATTCCAAAAGTAATTGGTGGCTTACAAGATCTTCAATACTTGAGTCTTGAAGGCAATGAGCTACATGGCCTAATCATTGATGAGATATGTGAAATCACAAAGCTTGCCTATTTATTATTAAGTAGAAACAAGTTTTCTGGAGGAATACCACATTGTTTAGCAAATGTTACCTCTTTACGAGAACTTTACTTGGACTCTAATAAGTTAATTTTAGAAATACCCTCCTCCTTTTGGAATTTGAAGGATATATTGAAAGTAAACTTATCTTCCAATATTTTAGTTGGAAATGTATCATCAAATATTGGAAACTTAAATGCTCTTATATCCCTAGATTTGTCAAGAAATCATATTTCAGGCAATATTCCAACATCTTTGGGTGGACTAAAGAAGTTGCAAGATCTCTCCTTAGCACATAACAATTTGCAAGGAAATATTCCTAAATCATTTGGAAATATGTTGAGCTTAGTAAATTTGGACCTTTCTGAGAATAATTTATCTGGTGAGATTCCTAAATCCTTTGAGTCACTTACTTATCTTAAGTATATCAATCTCTCATATAACAAACTACAAGGAGAGATACCAAGTGGTGGAGTTTTTGCAAATTTAACTGCTGAATCTTTCATGATGAATGAAGCTCTTTGTGGCCATCCACAACTAAAAGTTCCTCATTGTGACAAAGGAAGAAGAAAACAGTCATGGGCAAAATCACTTTTACTAAAATGCATATTACCCATGGTTGTGTCAATAATTTTAATTGTCTTGGGCATTATCCTTTTCATCCATAGACGATCAAATTTAAGGGAACCAATTGAGAGCGGTTTATCCATTTTAGGATGGCCAAGGAGGATTTCTTATTTTGAAATTCTAGAAGCAACTAATGGATTTGATGAGAGTAACTTTCTTGGAAAGGGGAGTTATGGTGATGTGTTCAAAGGAAAGCTTTTGAATGGGATGATGGTTGCAATTAAAGTATTTAATTTTGAATCTGAAAAGATGTCAAGGAGCTTTGAAGTGGAATGCAACACAATGCGTAATGTGCGCCATTATAATTTGGTGAAGATCATAAGTAGTTGTTCTAATGTTGATTTTAAGTGTTTGATCATGGAGTTCATGCCTAAAGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTGGATTTTCTACAAAGGTTGAATATAATGATAAATGTAGCATCTGCTTTGGAGTATCTCCATCATGGCTTGTCAACACCGATAGTTCATTGCGATTTAAAGCCAAGTAACATTTTGTTAGATGATGATATGGTTGCTCATGTGAGTGACTTTGGGATTTCCAAACTTTTAGATGAAGGACAATCAAAAACACATACAGAGACGATACCTACAATTGGATATGTTTCACCTGAATATGGATCTACTGGAGTTGTTTCAACAAAAGTAGATGTGTATAGCTATGGAATTATGTTAATGGAAGTGTTCACAAGAAAAAAACCAACAGAAGATATGTTTGTCTCAGAATTGAATTTGAAGAGTTGGGTAAGTGACTCAATGCCACATGAAATAATTAATGTCATAGATTCCAATTTATTGCAGGGAGATGTTCAATATGCTGGTGATATATTGACTTCTACATCCAGTATTTTTGAATTGGCATTAAATTGTTGCATTGACTTTCCTGAAATGCGAAGCAGCATGACAGATGTTGTTGTGTCATTAAACAAGATCAAGAACATGATTATGCAAAAGCATCATCGTTGA 3933 0.3473 MLEAFNQFMMANLWFHFSFSMFSLLCYLMVCPTLCHTIFTKNDELALLALKNSVRDPFNHLANWSNSFSICNWVGVTCDSKGERVSVLNLAHMSLMGTLPSQVGNLSSLVELDLHSNNFHGELPKELLQLHKLRILNLSYNELDGKIPAWIGSLFALQCLSFRDNSFRGVIPPSISNLSKLETLDWSHNFIHGSIPLEIGRLQHLKILRIAGNNLSRNIPPTISSLSSLELMSLSLNSLKGDIPNEIANLSNLKIMSLAQNQLIGYIPRSIGSLVSLQELDLGFNNLQGDIPNGIGKLDMLQVLGLEHNNLQGGIPNEIANLTSLKIMYLGYNQLIGYIPTSIGSLVLLQELDLGSNNLQGDIPEGIGKLDMLQELYLDHNNLQGSIPEQIGNLKSLKILFLDTNMFSSQIPSTIFNISGLQEIDFSWNNLSGGIPSNICHGLPNLQALDLQANKLFGAIPSDWTQCKELKELQLGDNFFTGNIPQTIGGLTNLKIIYLRANKLSGQIPRSIENLTKLQELDLSGNNIEGNIPQTIGDLSNLKIISIGANKLSGQIPRNIGKLKKLQELDLSRNNIEGDIPKEIGIPSNICNGLPNLQYLALQDNKLFGPIPAGWTQCKELEIIRLNNNLFTGHIPKSIGNLTMLQDLNVNSNSLEGLIPMEIGNLHKLEILDLWNNKLRGSIPSNIFNISTLRYLNLGSNSITGNLPSNFGNLTSCYELSLEENVLTGSIPKVIGGLQDLQYLSLEGNELHGLIIDEICEITKLAYLLLSRNKFSGGIPHCLANVTSLRELYLDSNKLILEIPSSFWNLKDILKVNLSSNILVGNVSSNIGNLNALISLDLSRNHISGNIPTSLGGLKKLQDLSLAHNNLQGNIPKSFGNMLSLVNLDLSENNLSGEIPKSFESLTYLKYINLSYNKLQGEIPSGGVFANLTAESFMMNEALCGHPQLKVPHCDKGRRKQSWAKSLLLKCILPMVVSIILIVLGIILFIHRRSNLREPIESGLSILGWPRRISYFEILEATNGFDESNFLGKGSYGDVFKGKLLNGMMVAIKVFNFESEKMSRSFEVECNTMRNVRHYNLVKIISSCSNVDFKCLIMEFMPKGSLEKWLYSHNYCLDFLQRLNIMINVASALEYLHHGLSTPIVHCDLKPSNILLDDDMVAHVSDFGISKLLDEGQSKTHTETIPTIGYVSPEYGSTGVVSTKVDVYSYGIMLMEVFTRKKPTEDMFVSELNLKSWVSDSMPHEIINVIDSNLLQGDVQYAGDILTSTSSIFELALNCCIDFPEMRSSMTDVVVSLNKIKNMIMQKHHR 1310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2083 1310 FunFam Leucine-rich receptor-like protein kinase family protein 635 733 - -
Prci6g2083 1310 Gene3D Ribonuclease Inhibitor 589 677 IPR032675 -
Prci6g2083 1310 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 434 588 - -
Prci6g2083 1310 FunFam Piriformospora indica-insensitive protein 2 243 339 - -
Prci6g2083 1310 SMART LRR_typ_2 594 618 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 666 690 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 906 931 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 786 809 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 491 514 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 202 226 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 882 905 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 274 298 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 106 130 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 370 393 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 642 665 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 563 587 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 443 467 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 858 881 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 394 418 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 515 539 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 346 369 IPR003591 -
Prci6g2083 1310 SMART LRR_typ_2 834 857 IPR003591 -
Prci6g2083 1310 Pfam Leucine Rich Repeat 276 298 IPR001611 GO:0005515
Prci6g2083 1310 Pfam Leucine Rich Repeat 132 154 IPR001611 GO:0005515
Prci6g2083 1310 SMART serkin_6 1025 1304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2083 1310 Pfam Leucine Rich repeat 564 579 IPR001611 GO:0005515
Prci6g2083 1310 ProSiteProfiles Leucine-rich repeat profile. 565 587 IPR001611 GO:0005515
Prci6g2083 1310 Pfam Protein kinase domain 1027 1293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2083 1310 Gene3D Ribonuclease Inhibitor 338 440 IPR032675 -
Prci6g2083 1310 Gene3D Ribonuclease Inhibitor 42 157 IPR032675 -
Prci6g2083 1310 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1101 1310 - -
Prci6g2083 1310 FunFam Piriformospora indica-insensitive protein 2 340 433 - -
Prci6g2083 1310 SUPERFAMILY RNI-like 88 408 - -
Prci6g2083 1310 PANTHER LEUCINE RICH REPEAT KINASE 2 653 1301 - -
Prci6g2083 1310 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 736 958 - -
Prci6g2083 1310 ProSitePatterns Protein kinases ATP-binding region signature. 1031 1053 IPR017441 GO:0005524
Prci6g2083 1310 SUPERFAMILY L domain-like 585 944 - -
Prci6g2083 1310 Gene3D Ribonuclease Inhibitor 441 512 IPR032675 -
Prci6g2083 1310 Gene3D Ribonuclease Inhibitor 513 588 IPR032675 -
Prci6g2083 1310 SUPERFAMILY L domain-like 363 678 - -
Prci6g2083 1310 FunFam Serine-threonine protein kinase plant-type 1008 1100 - -
Prci6g2083 1310 Gene3D Ribonuclease Inhibitor 158 241 IPR032675 -
Prci6g2083 1310 SMART LRR_sd22_2 738 761 - -
Prci6g2083 1310 SMART LRR_sd22_2 539 562 - -
Prci6g2083 1310 SMART LRR_sd22_2 491 517 - -
Prci6g2083 1310 SMART LRR_sd22_2 666 692 - -
Prci6g2083 1310 SMART LRR_sd22_2 370 396 - -
Prci6g2083 1310 SMART LRR_sd22_2 346 369 - -
Prci6g2083 1310 SMART LRR_sd22_2 858 877 - -
Prci6g2083 1310 SMART LRR_sd22_2 563 588 - -
Prci6g2083 1310 SMART LRR_sd22_2 443 472 - -
Prci6g2083 1310 SMART LRR_sd22_2 786 812 - -
Prci6g2083 1310 SMART LRR_sd22_2 274 308 - -
Prci6g2083 1310 SMART LRR_sd22_2 178 199 - -
Prci6g2083 1310 SMART LRR_sd22_2 250 269 - -
Prci6g2083 1310 SMART LRR_sd22_2 322 341 - -
Prci6g2083 1310 SMART LRR_sd22_2 882 908 - -
Prci6g2083 1310 Gene3D Transferase(Phosphotransferase) domain 1 1101 1310 - -
Prci6g2083 1310 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Prci6g2083 1310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1144 1156 IPR008271 GO:0004672|GO:0006468
Prci6g2083 1310 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 40 199 - -
Prci6g2083 1310 Gene3D Ribonuclease Inhibitor 678 956 IPR032675 -
Prci6g2083 1310 Gene3D Ribonuclease Inhibitor 242 337 IPR032675 -
Prci6g2083 1310 SUPERFAMILY Protein kinase-like (PK-like) 1005 1297 IPR011009 -
Prci6g2083 1310 ProSiteProfiles Protein kinase domain profile. 1025 1310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2083 1310 Pfam Leucine rich repeat 396 456 IPR001611 GO:0005515
Prci6g2083 1310 Pfam Leucine rich repeat 469 528 IPR001611 GO:0005515
Prci6g2083 1310 Pfam Leucine rich repeat 864 919 IPR001611 GO:0005515
Prci6g2083 1310 Pfam Leucine rich repeat 324 383 IPR001611 GO:0005515
Prci6g2083 1310 Pfam Leucine rich repeat 692 751 IPR001611 GO:0005515
Prci6g2083 1310 Gene3D Phosphorylase Kinase; domain 1 1009 1100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2083 Prci-Chr6 25790872 25843256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2083 46 753 Receptor kinase-like Gene Family AT5G46330 36.721 5.21e-120 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2083 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2083 - K13420 gmx:100784397 1108.2