Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2082 ATGTTAGAGGCCTTCAACCAATTCATGATGGCGAACCTTTGGTTTCATTTTTCCTTCTCCATGTTCTCACTGCTTTGCTATCTCATGGTCTGTCCAACTTTATGCCACACCATTTTCACCAAAAATGATGAATTGGCACTTCTTGCTCTCAAAAATTCTGTGAGAGACCCATTCAATCACTTGGCTAATTGGTCTAACTCTTTCTCCATTTGCAATTGGGTTGGGGTTACTTGTGATTCTAAAGGTGAGCGAGTAAGTGTATTGAATCTTGCTCACATGAGTCTCATGGGCACCTTACCCTCACAAGTGGGGAATTTGTCCTCCCTTGTTGAACTTGACCTTCATAGTAACAACTTTCATGGTGAGTTACCAAAGGAGTTGTTGCAGTTACATAAGTTGAGAATTCTCAACCTTAGCTATAATGAATTGGATGGGAAAATTCCTGCGTGGATTGGAAGTTTATTTGCTCTTCAATGCCTGAGCTTTCGAGATAATAGTTTTCGGGGTGTTATTCCTCCAAGCATATCAAATTTGTCAAAATTAGAGACCTTAGATTGGAGTCACAATTTCATCCATGGATCTATTCCACTTGAGATCGGAAGGCTTCAACATTTAAAGATTTTACGTATAGCAGGGAACAATCTTTCAAGAAATATACCTCCAACTATTTCTAGCTTATCCTCTCTTGAGTTGATGTCTTTGTCATTGAACTCCTTAAAAGGAGATATTCCAAATGAAATTGCCAATCTTTCAAATCTTAAAATTATGTCTTTGGCTCAAAATCAACTCATTGGCTACATACCTAGAAGCATTGGAAGTTTGGTTTCGCTTCAGGAATTAGATCTTGGTTTCAATAATTTACAAGGTGATATACCAAATGGTATTGGAAAATTGGATATGCTTCAAGTGCTAGGTCTTGAACATAATAATTTACAAGGAGGTATTCCAAATGAAATTGCCAATCTTACGAGTCTTAAAATTATGTACTTGGGTTATAATCAACTCATTGGCTACATACCTACAAGCATTGGAAGTTTGGTTTTGCTTCAGGAATTAGATCTTGGTTCCAATAATTTACAAGGTGATATACCTGAAGGAATTGGGAAATTGGATATGCTTCAAGAGCTATATCTTGATCATAATAATTTACAAGGAAGCATTCCCGAACAGATTGGTAATCTTAAAAGTCTAAAAATTTTATTTTTAGACACCAATATGTTTTCAAGCCAAATACCATCAACTATCTTTAATATATCTGGGTTGCAAGAGATTGATTTTAGTTGGAATAATTTGTCGGGAGGCATTCCCTCAAATATATGTCATGGCCTTCCAAATTTACAAGCTTTGGATCTTCAAGCCAACAAATTATTTGGAGCTATACCATCTGATTGGACACAATGCAAGGAACTCAAAGAGTTACAATTAGGAGACAACTTCTTCACAGGAAATATTCCTCAAACAATTGGTGGCCTCACAAACTTGAAAATTATATATCTACGTGCTAACAAGTTGTCTGGCCAGATACCAAGGAGTATTGAAAATTTGACAAAACTTCAAGAGCTAGACCTTAGTGGAAATAACATTGAAGGAAATATTCCTCAAACAATTGGTGACCTATCAAACTTGAAAATTATATCTATAGGTGCTAACAAGTTGTCCGGCCAAATACCAAGGAATATTGGAAAGTTGAAAAAACTTCAAGAACTAGACCTTAGTAGAAATAACATTGAAGGAGATATTCCCAAAGAGATTGGTAATCTTAAAAGTCTGGAAATTTTATATTTACACAGCAATAAGTTTTCTGCCCAAATACCATCGACTATCTTTAATATATCTGAGTTTCGGGATATTGATTTAAGTTGGAATAATTTGTCTGGAGGCATTCCTTCTAATATATGCAATGGACTTCCAAATTTACAATATTTGGCTCTTCAAGACAACAAATTATTTGGACCTATACCAGCTGGTTGGACACAATGCAAGGAGTTGGAAATAATAAGATTAAATAACAACTTATTCACAGGTCATATACCAAAAAGTATTGGAAACTTGACCATGCTTCAAGATTTAAATGTGAATTCCAATAGCTTGGAAGGTTTAATACCTATGGAAATAGGAAATCTCCATAAGCTTGAGATCTTAGATTTGTGGAATAACAAGTTGAGGGGATCTATTCCATCCAACATTTTTAACATTTCAACTTTGAGATACTTAAATCTTGGAAGCAATTCTATAACTGGCAATCTTCCATCAAATTTTGGGAATCTCACTAGTTGCTATGAACTATCCTTGGAAGAAAATGTTTTGACAGGATCAATTCCAAAAGTAATTGGTGGCTTACAAGATCTTCAATACTTGAGTCTTGAAGGCAATGAGCTACATGGCCTAATCATTGATGAGATATGTGAAATCACAAAGCTTGCCTATTTATTATTAAGTAGAAACAAGTTTTCTGGAGGAATACCACATTGTTTAGCAAATGTTACCTCTTTACGAGAACTTTACTTGGACTCTAATAAGTTAATTTTAGAAATACCCTCCTCCTTTTGGAATTTGAAGGATATATTGAAAGTAAACTTATCTTCCAATATTTTAGTTGGAAATGTATCATCAAATATTGGAAACTTAAATGCTCTTATATCCCTAGATTTGTCAAGAAATCATATTTCAGGCAATATTCCAACATCTTTGGGTGGACTAAAGAAGTTGCAAGATCTCTCCTTAGCACATAACAATTTGCAAGGAAATATTCCTAAATCATTTGGAAATATGTTGAGCTTAGTAAATTTGGACCTTTCTGAGAATAATTTATCTGGTGAGATTCCTAAATCCTTTGAGTCACTTACTTATCTTAAGTATATCAATCTCTCATATAACAAACTACAAGGAGAGATACCAAGTGGTGGAGTTTTTGCAAATTTAACTGCTGAATCTTTCATGATGAATGAAGCTCTTTGTGGCCATCCACAACTAAAAGTTCCTCATTGTGACAAAGGAAGAAGAAAACAGTCATGGGCAAAATCACTTTTACTAAAATGCATATTACCCATGGTTGTGTCAATAATTTTAATTGTCTTGGGCATTATCCTTTTCATCCATAGACGATCAAATTTAAGGGAACCAATTGAGAGCGGTTTATCCATTTTAGGATGGCCAAGGAGGATTTCTTATTTTGAAATTCTAGAAGCAACTAATGGATTTGATGAGAGTAACTTTCTTGGAAAGGGGAGTTATGGTGATGTGTTCAAAGGAAAGCTTTTGAATGGGATGATGGTTGCAATTAAAGTATTTAATTTTGAATCTGAAAAGATGTCAAGGAGCTTTGAAGTGGAATGCAACACAATGCGTAATGTGCGCCATTATAATTTGGTGAAGATCATAAGTAGTTGTTCTAATGTTGATTTTAAGTGTTTGATCATGGAGTTCATGCCTAAAGGGAGCCTTGAAAAATGGTTATATTCTCATAACTATTGTTTGGATTTTCTACAAAGGTTGAATATAATGATAAATGTAGCATCTGCTTTGGAGTATCTCCATCATGGCTTGTCAACACCGATAGTTCATTGCGATTTAAAGCCAAGTAACATTTTGTTAGATGATGATATGGTTGCTCATGTGAGTGACTTTGGGATTTCCAAACTTTTAGATGAAGGACAATCAAAAACACATACAGAGACGATACCTACAATTGGATATGTTTCACCTGAATATGGATCTACTGGAGTTGTTTCAACAAAAGTAGATGTGTATAGCTATGGAATTATGTTAATGGAAGTGTTCACAAGAAAAAAACCAACAGAAGATATGTTTGTCTCAGAATTGAATTTGAAGAGTTGGGTAAGTGACTCAATGCCACATGAAATAATTAATGTCATAGATTCCAATTTATTGCAGGGAGATGTTCAATATGCTGGTGATATATTGACTTCTACATCCAGTATTTTTGAATTGGCATTAAATTGTTGCATTGACTTTCCTGAAATGCGAAGCAGCATGACAGATGTTGTTGTGTCATTAAACAAGATCAAGAACATGATTATGCAAAAGCATCATCGTTGA 4059 0.3459 MLEAFNQFMMANLWFHFSFSMFSLLCYLMVCPTLCHTIFTKNDELALLALKNSVRDPFNHLANWSNSFSICNWVGVTCDSKGERVSVLNLAHMSLMGTLPSQVGNLSSLVELDLHSNNFHGELPKELLQLHKLRILNLSYNELDGKIPAWIGSLFALQCLSFRDNSFRGVIPPSISNLSKLETLDWSHNFIHGSIPLEIGRLQHLKILRIAGNNLSRNIPPTISSLSSLELMSLSLNSLKGDIPNEIANLSNLKIMSLAQNQLIGYIPRSIGSLVSLQELDLGFNNLQGDIPNGIGKLDMLQVLGLEHNNLQGGIPNEIANLTSLKIMYLGYNQLIGYIPTSIGSLVLLQELDLGSNNLQGDIPEGIGKLDMLQELYLDHNNLQGSIPEQIGNLKSLKILFLDTNMFSSQIPSTIFNISGLQEIDFSWNNLSGGIPSNICHGLPNLQALDLQANKLFGAIPSDWTQCKELKELQLGDNFFTGNIPQTIGGLTNLKIIYLRANKLSGQIPRSIENLTKLQELDLSGNNIEGNIPQTIGDLSNLKIISIGANKLSGQIPRNIGKLKKLQELDLSRNNIEGDIPKEIGNLKSLEILYLHSNKFSAQIPSTIFNISEFRDIDLSWNNLSGGIPSNICNGLPNLQYLALQDNKLFGPIPAGWTQCKELEIIRLNNNLFTGHIPKSIGNLTMLQDLNVNSNSLEGLIPMEIGNLHKLEILDLWNNKLRGSIPSNIFNISTLRYLNLGSNSITGNLPSNFGNLTSCYELSLEENVLTGSIPKVIGGLQDLQYLSLEGNELHGLIIDEICEITKLAYLLLSRNKFSGGIPHCLANVTSLRELYLDSNKLILEIPSSFWNLKDILKVNLSSNILVGNVSSNIGNLNALISLDLSRNHISGNIPTSLGGLKKLQDLSLAHNNLQGNIPKSFGNMLSLVNLDLSENNLSGEIPKSFESLTYLKYINLSYNKLQGEIPSGGVFANLTAESFMMNEALCGHPQLKVPHCDKGRRKQSWAKSLLLKCILPMVVSIILIVLGIILFIHRRSNLREPIESGLSILGWPRRISYFEILEATNGFDESNFLGKGSYGDVFKGKLLNGMMVAIKVFNFESEKMSRSFEVECNTMRNVRHYNLVKIISSCSNVDFKCLIMEFMPKGSLEKWLYSHNYCLDFLQRLNIMINVASALEYLHHGLSTPIVHCDLKPSNILLDDDMVAHVSDFGISKLLDEGQSKTHTETIPTIGYVSPEYGSTGVVSTKVDVYSYGIMLMEVFTRKKPTEDMFVSELNLKSWVSDSMPHEIINVIDSNLLQGDVQYAGDILTSTSSIFELALNCCIDFPEMRSSMTDVVVSLNKIKNMIMQKHHR 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2082 1352 Gene3D Ribonuclease Inhibitor 611 688 IPR032675 -
Prci6g2082 1352 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 218 439 - -
Prci6g2082 1352 ProSitePatterns Protein kinases ATP-binding region signature. 1073 1095 IPR017441 GO:0005524
Prci6g2082 1352 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 604 1336 - -
Prci6g2082 1352 Gene3D Phosphorylase Kinase; domain 1 1051 1142 - -
Prci6g2082 1352 Gene3D Ribonuclease Inhibitor 40 194 IPR032675 -
Prci6g2082 1352 ProSiteProfiles Protein kinase domain profile. 1067 1352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2082 1352 SUPERFAMILY RNI-like 616 968 - -
Prci6g2082 1352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1186 1198 IPR008271 GO:0004672|GO:0006468
Prci6g2082 1352 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 747 1000 - -
Prci6g2082 1352 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 663 746 - -
Prci6g2082 1352 SUPERFAMILY RNI-like 88 408 - -
Prci6g2082 1352 SMART LRR_sd22_2 539 562 - -
Prci6g2082 1352 SMART LRR_sd22_2 924 950 - -
Prci6g2082 1352 SMART LRR_sd22_2 491 517 - -
Prci6g2082 1352 SMART LRR_sd22_2 370 396 - -
Prci6g2082 1352 SMART LRR_sd22_2 346 369 - -
Prci6g2082 1352 SMART LRR_sd22_2 708 734 - -
Prci6g2082 1352 SMART LRR_sd22_2 900 919 - -
Prci6g2082 1352 SMART LRR_sd22_2 443 472 - -
Prci6g2082 1352 SMART LRR_sd22_2 178 199 - -
Prci6g2082 1352 SMART LRR_sd22_2 274 308 - -
Prci6g2082 1352 SMART LRR_sd22_2 828 854 - -
Prci6g2082 1352 SMART LRR_sd22_2 780 803 - -
Prci6g2082 1352 SMART LRR_sd22_2 250 269 - -
Prci6g2082 1352 SMART LRR_sd22_2 563 589 - -
Prci6g2082 1352 SMART LRR_sd22_2 322 341 - -
Prci6g2082 1352 Gene3D Transferase(Phosphotransferase) domain 1 1143 1352 - -
Prci6g2082 1352 Gene3D Ribonuclease Inhibitor 708 1004 IPR032675 -
Prci6g2082 1352 SMART LRR_typ_2 876 899 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 636 660 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 828 851 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 491 514 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 202 226 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 708 732 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 274 298 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 924 947 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 106 130 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 370 393 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 443 467 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 684 707 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 587 611 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 394 418 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 900 923 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 515 539 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 948 973 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 346 369 IPR003591 -
Prci6g2082 1352 SMART LRR_typ_2 563 586 IPR003591 -
Prci6g2082 1352 SMART serkin_6 1067 1346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2082 1352 Gene3D Ribonuclease Inhibitor 419 610 IPR032675 -
Prci6g2082 1352 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 440 635 - -
Prci6g2082 1352 Gene3D Ribonuclease Inhibitor 195 295 IPR032675 -
Prci6g2082 1352 Pfam Leucine rich repeat 396 456 IPR001611 GO:0005515
Prci6g2082 1352 Pfam Leucine rich repeat 469 528 IPR001611 GO:0005515
Prci6g2082 1352 Pfam Leucine rich repeat 906 961 IPR001611 GO:0005515
Prci6g2082 1352 Pfam Leucine rich repeat 734 793 IPR001611 GO:0005515
Prci6g2082 1352 Pfam Leucine rich repeat 540 600 IPR001611 GO:0005515
Prci6g2082 1352 Pfam Leucine rich repeat 324 383 IPR001611 GO:0005515
Prci6g2082 1352 SUPERFAMILY L domain-like 442 726 - -
Prci6g2082 1352 Gene3D Ribonuclease Inhibitor 296 418 IPR032675 -
Prci6g2082 1352 Pfam Protein kinase domain 1069 1335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2082 1352 FunFam Serine-threonine protein kinase plant-type 1050 1142 - -
Prci6g2082 1352 Pfam Leucine rich repeat N-terminal domain 41 79 IPR013210 -
Prci6g2082 1352 SUPERFAMILY Protein kinase-like (PK-like) 1047 1339 IPR011009 -
Prci6g2082 1352 ProSiteProfiles Leucine-rich repeat profile. 565 587 IPR001611 GO:0005515
Prci6g2082 1352 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 40 199 - -
Prci6g2082 1352 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1143 1352 - -
Prci6g2082 1352 Pfam Leucine Rich Repeat 132 154 IPR001611 GO:0005515
Prci6g2082 1352 Pfam Leucine Rich Repeat 276 298 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2082 Prci-Chr6 25790872 25843256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2082 46 795 Receptor kinase-like Gene Family AT5G46330 36.870 2.97e-125 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2082 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2082 - K13420 vri:117923495 1090.87