Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2077 ATGGCAAATCTTTGTTTTCATTTCCCCTTCCTCATGTTCTCCCTACTTTATCTCAAGGTTTGTTTCACTTTATTCCACACCAATCTTACTACGAATGATGAATTGGCACTACTTGCTTTGAAGTTTTCTGTCAAGGACCCTTACAATCACTTGGCTAATTGGTCCAACTCTTCTTCCATTTGCAATTGGGTTGGGGTTATGTGTGATGCTCATCATGAGAGAGTAATAGCCTTGAATCTTGGTGAGATGGGTCTCAAGGGAACTTTGCCCTCAAAAATTTGGAATTTGTCTTTCCTAGTTGAACTTGACCTTCATAGTAACAACCTTTATGGTGAGTTGCCAAAAGAGTTGGTCCAGTTACACAAGCTGCAAATTCTCAACTTGAGCTACAATGAATTCAATGGAGAAATTCCAATTTGGATTGGAATCTTGTTTACCCTTCAACACTTCCATCTCGGTAATAATAGTTTTGGAGGTGTTATTCCTAGAAGCATAACAAACTTGTCAAAGTTAGAGACTTTGGATTGGAATTATAACTTTATTGAAGGAGTTATTCCATTTGAGATTGGAAAACTTCAAAATTTGAAGATTTTACGGATTGCAGGAAACAAGCTTTCAGGAAGAATAACTCCAACTATTTCTAACTTATCCTCACTTGAGTTGCTGTCTTTGTCTTTCAACTCCTTAACAGGAGATATTCCAATAGAGATTGGCCGTCTTCAAAATTTAAAAATTCTATATTTGGATACTAATAAGCTTTCTGGTCACATGCCATCAAATATCTTCAATATATCAGAGTTCCAAGAGATTGATTTAAGCTGGAATAATTTGTCAGGAAGTATTCCCTCTAATATTTGTCATGGACTTCCAAAATTACAAAGGCTGCATCTTCAAAAAAATGAATTATCAGGAGCCCTGCCATCTAATTGGATACAATGCAAAGAGCTCAAAGACTTACAATTAGAATACAACTCTTTGACAGGAGATATCCCCGAAGAGATTGGTAATCTTAAAAGTCTAGAACTTTTATATTTAGGCAGAAATAAGTTTTCTGCCCAAATTTCATCAGCTATCTTTAATATGTCTGAGTTGCGGAATATTGATTTAAGTTGGAATAATTTATCGGGAGGCATTCCTTCTAATATATGCAATGGACTTCCAAATTTACAACATTTGGGTCTTCAAGGCAACAAATTATCCGGACCTATACCATCTGATTGGACACATTGCAAGGACCTCAAAAGGTTGACATTAGAAACCAACTTTTTCAAAGGCCATATATCAAAAAGCATGGGAAACTTAACTATGCTTCAATTGTTACGTCTTGAAGACAATAACCTGGAAGGAAATATTCCAACAACTCTGGGTGGCTTGAAGAATTTGCAAGATCTCTCCTTAGCACATAACAATTTGCAAGGAAATATTCCTGAATCATTTGGAAATATGTTGAGCTTAGTAAAATTGGATCTTTCTGAGAATAATTTGTTTGGGGAGATCCCTAAATCTCTAGAGTTACTTATTGATCTTAAGTATGTCAATCTCTCCTATAACAAACTCCAAGGAGAGATTCCAAGTGGAGGAGCTTTTAAAAATTTGAATTTTGAATCTTTTATGATGAATGAAGCTCTTTATGGCATTATCCTTTTAAGACATAAACGACAAAAAAATTCAAGGGGTCTAGTTGAAAGGGATTTATCAAATTTAAGAGTGCCAAGAAGGATTTCTTATTTTGAAATCCAAGAAGCAACTAATGGATTTGATGACAGTAACATACTTGGGAGGGGCAGTTATGGTTCTATGTTCAAAGGAAAGCTTTCCAGTGGAATGATTATTGCGGTTAAGATCTTCAATTTTGATTCCCATGAAATGTTAAGGAGCTTTGAAAAAGAATGTGACATATTGCGTAATGTGCGCCATCGCAATTTGGTGAAAGTTATAAGTTGTTGTTCCAATGTTGATTTCAAATCTTTGGTAATGGAGTTCATGCCCAATGGGAGCCTTGAAAAATGGTTATATTCTCACAACTATTTTTTAGGTTTTCTCCAAAGGATGAATATAATGATAAATGTAGCAACTGCTTTGGAATATCTTCATCATAGTTTGTTAGCACCGATTATTCATTGTGATTTGAAGCCAAGCAACATTTTATTGGATGATGACATGGTTGGCCATGTGAGTGACTTTGGAATTTCCAAACTTTTAGATAAAGGAGAATCTAAGATATACACAGAGACAATATCTACGATAGGCTATATTGCACCAGGATTTGGTCACATTATTGTGGATTGTGCTACTCGAAGCATTGTCACCATTAGGGAAGGGCAAGTGTATGAAGCACTAGAAGAAGATGAGGATGAGACTGAGTCTTATGGAACTGATCCAGTATATGATGAAATGGTTATACTTACAGATCAGGGTAAAGCATTGTTATTTCCAACAAGCCTGCTTACAGGACGAATCCCTAGGAAAATGCTGAAGTCCAGTAAGAAGTTTAAGAGCTATTGA 2505 0.3569 MANLCFHFPFLMFSLLYLKVCFTLFHTNLTTNDELALLALKFSVKDPYNHLANWSNSSSICNWVGVMCDAHHERVIALNLGEMGLKGTLPSKIWNLSFLVELDLHSNNLYGELPKELVQLHKLQILNLSYNEFNGEIPIWIGILFTLQHFHLGNNSFGGVIPRSITNLSKLETLDWNYNFIEGVIPFEIGKLQNLKILRIAGNKLSGRITPTISNLSSLELLSLSFNSLTGDIPIEIGRLQNLKILYLDTNKLSGHMPSNIFNISEFQEIDLSWNNLSGSIPSNICHGLPKLQRLHLQKNELSGALPSNWIQCKELKDLQLEYNSLTGDIPEEIGNLKSLELLYLGRNKFSAQISSAIFNMSELRNIDLSWNNLSGGIPSNICNGLPNLQHLGLQGNKLSGPIPSDWTHCKDLKRLTLETNFFKGHISKSMGNLTMLQLLRLEDNNLEGNIPTTLGGLKNLQDLSLAHNNLQGNIPESFGNMLSLVKLDLSENNLFGEIPKSLELLIDLKYVNLSYNKLQGEIPSGGAFKNLNFESFMMNEALYGIILLRHKRQKNSRGLVERDLSNLRVPRRISYFEIQEATNGFDDSNILGRGSYGSMFKGKLSSGMIIAVKIFNFDSHEMLRSFEKECDILRNVRHRNLVKVISCCSNVDFKSLVMEFMPNGSLEKWLYSHNYFLGFLQRMNIMINVATALEYLHHSLLAPIIHCDLKPSNILLDDDMVGHVSDFGISKLLDKGESKIYTETISTIGYIAPGFGHIIVDCATRSIVTIREGQVYEALEEDEDETESYGTDPVYDEMVILTDQGKALLFPTSLLTGRIPRKMLKSSKKFKSY 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2077 834 SMART serkin_6 586 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2077 834 Pfam Leucine Rich Repeat 364 384 IPR001611 GO:0005515
Prci6g2077 834 Pfam Leucine Rich Repeat 147 168 IPR001611 GO:0005515
Prci6g2077 834 ProSiteProfiles Protein kinase domain profile. 586 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2077 834 FunFam Serine-threonine protein kinase plant-type 566 661 - -
Prci6g2077 834 Gene3D Phosphorylase Kinase; domain 1 568 661 - -
Prci6g2077 834 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 30 186 - -
Prci6g2077 834 FunFam Predicted protein 187 283 - -
Prci6g2077 834 PANTHER OS04G0122200 PROTEIN 307 761 - -
Prci6g2077 834 Gene3D Transferase(Phosphotransferase) domain 1 662 781 - -
Prci6g2077 834 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 289 556 - -
Prci6g2077 834 SMART LRR_sd22_2 458 477 - -
Prci6g2077 834 SMART LRR_sd22_2 240 266 - -
Prci6g2077 834 SMART LRR_sd22_2 168 189 - -
Prci6g2077 834 SMART LRR_sd22_2 192 218 - -
Prci6g2077 834 Gene3D Ribonuclease Inhibitor 185 284 IPR032675 -
Prci6g2077 834 Pfam Leucine rich repeat 437 495 IPR001611 GO:0005515
Prci6g2077 834 SUPERFAMILY Protein kinase-like (PK-like) 568 754 IPR011009 -
Prci6g2077 834 SUPERFAMILY L domain-like 32 307 - -
Prci6g2077 834 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Prci6g2077 834 Pfam Protein kinase domain 588 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2077 834 SUPERFAMILY L domain-like 282 541 - -
Prci6g2077 834 SMART LRR_typ_2 482 505 IPR003591 -
Prci6g2077 834 SMART LRR_typ_2 192 216 IPR003591 -
Prci6g2077 834 SMART LRR_typ_2 240 264 IPR003591 -
Prci6g2077 834 SMART LRR_typ_2 96 120 IPR003591 -
Prci6g2077 834 SMART LRR_typ_2 506 531 IPR003591 -
Prci6g2077 834 SMART LRR_typ_2 289 313 IPR003591 -
Prci6g2077 834 SMART LRR_typ_2 386 410 IPR003591 -
Prci6g2077 834 SMART LRR_typ_2 458 481 IPR003591 -
Prci6g2077 834 SMART LRR_typ_2 434 457 IPR003591 -
Prci6g2077 834 SMART LRR_typ_2 337 361 IPR003591 -
Prci6g2077 834 Gene3D Ribonuclease Inhibitor 285 558 IPR032675 -
Prci6g2077 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
Prci6g2077 834 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2077 Prci-Chr6 25186287 25223619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2077 33 757 Receptor kinase-like Gene Family AT3G47570 33.524 1.14e-131 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2077 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2077 - - pcin:129314030 1656.34