Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2074 ATGGCGAACCTTCGTTTCCATTTCTCCTTCTCCATGTTCTTATTGCTTTGTCTCATGATTCACCCCACTTGTTGTCATACCAATTTCAGTACTGATGAATTGGCACTTCGTGCCTTTAGATTTTCTGTGAGAGACCCTTATAATCACTTGGATGATTGGTCCAACTCTTCTTCCATCTGCAATTGGGTAGGGGTTACATGTGATTCTAATTATGGGAGAGTGAGGATCCTGGATCTTAGTGAAATGAGTCTTAAGAGAACCTTACCCTCACAAATTGGAAATCTATCTTTCCTTGTGAAGCTCTACCTTCACAGCAACAACTTTTATGGTGAGTTGCCAAAAGAGTTATTCCAACTACGCAAGTTGGAAATTCTCAACTTGAGCTATAATGCATTCAATGGAGTAATCCCAACTTGGATTGGAAGCTTGTCTGCACTTCAACACTTGATTCTCAACAACAATAGTTTGGATGGTGTTATTCCTTCAAGTATATCCAATTTGTCAAAGTTGGAGAGCTTGGAATGCAGATCCAATTTTATAAAAGGTTCCATTCCATTTGAAATTGGAAGACTAGGGAGATTGAAGATTTTGCGCATTTCAGTAAACAACCTTTCAAGAATAATACCTTCAGCTATTTCTAATTTATCCTCACTTGAGCGTATGATTTTATCTTACAACTCTTTATCAGGGAATATTCCCGAAACAATCGGTGCTCTCACAAACCCGAAAATAATAAGCCTAAGTTTTAACAAGTTGTCTGGCCAAATACCAAGAACTATTGGAAACTTGACTTTGCTTCAAGAATTAAGTCTCGATCACAATAACTTAGAAGGAAGTATTCCCTCTGATATATGTCATGGGCTTCAAAATGTACAAGCGTTACATCTTCAGGCCAATGGATTATCAGGAGCCCTGCCATCTAAATGGATACAATGCAAAGAGCTCAAATACTTACAATTAGAATACAACTCTTTCACAGAAGAAATTCCCAAAACAATTGGCATATTCATAAAGCTAAAAAATCTAAGCCTAGGTGTTAACAAATTGTCTGGCCAAATGCCAAAAAGTATTGGAAACTTGACTGTGCTTCAGGAATTATATCTCGATGCCAATAACTTAGAAGGATCAATTCCAAAAGCAATTGGTGGCTTATTAGATCTTCAATATTTGGATCTTCAAGGCAATGAGCTACACGGCCTAATCATTGATGAGGATATATTGAGGGTAAACTTATCTTCCAATATTTTAGTTGGAAATGTATCATTGAGGATTGGAAACTTAAATGCTCTTGTAGCACTAGATTTGTCAAGAAATCATATTTCAGGCTTTATTCCAACGACTCTAGGTGGCTTGAAGAATTTGCAGGATTTATCCTTAGCACATAACAATTTGCAAGGAAATATTCCTGAATCTTTCAAAAATATGTTGAGCTTAGTAAAATTAGACCTTTTTAAGAATAATTTGTCTGGGAAGATTCCTAAATCTCTAAAGTTACTTATTGATCTTCAGTATGTCAATCTCTCCTATAACAAACTCCAAGGAGAGATTCCAAGTGGAGGAGTTTTTAAAAATTTGACTCCTGAATCTTTTATGATGAATCAAGCTCATTGTGGTGTTATCCTTTTAAGGCATAAACGACAACAAAATTCAACAAGTCTAGTTAGAAGGGATTTATCAATTTTAGGAGTGCCCATAAGGATTTCTTATTTTGAAATCCAAGAAGCAACCAATGGATTTGATGAGAGTAACATACTTGGAAGGGGTAGTTATGGTTCTGTGTTCAAAGGAAAACTTTCCAATGGAATAATCATTGTAGTTAAGATCTTCAAATTTGATTCACAAGTAACATTAAGGAGCTTTGAAAAAGAATGTGACATATTGCGTAATGCACGCCATCGCAATTTGGTGAAGGTTATAAGCTGTTGTTCCAATGTTGATTTCAAATCTCTGGTGATGGAATTCATGGCCAATGGGAGCCTTGAAAAATGGTTATATTCTCACAACTATTTTTTAGGTTATTTTCAAAGGTTGAATATAATGATAAATGTAGCAACTGCTTTGGAATATCTTCATCATGGCTTGTTAACACCAATTGTTCATTGTGATTTGAAGCCGAGCAACATTTTAATGGATGATGAAATGCATCTATGGAATTATGCTATTAGAGGTGTTTACAAGAAAAAGGCCCACAGAAGATATGTTTGTCCCACAGAAGATATGTTTGTCGAAGGATTGAACTTGAAGAGCTGGGTTGTCAGGACCGGGTGCAAAGCTGGTCGCATGTTCGAGCTTACTTCAATGCACCTACCTGAGATCACTGTTCCCACATTGTGTACAGCCTCCACATCCTCTTCTCCTGATTCTTCTCTCGACTTATGGCATCATCGTCTTGCTCACCCTTATTTGAGTACTATTTCTCAATATTCTTGTCCTTATACTTCTCAACAAAATGGTCGTGCTAAGCATAAACACCGTCATATTCTTGATTCTACTAGAGCATTGCTCATTTCCTCTTGTTGTCCTGAACGGTTTTGGGGTGAAGCAGCCATAACCTCTGGAAATATAAAGTTTTCATCTCTAACCGATCTCTCATCATTCTCATCTTCTTCATCTCCTATTTTTATAGATATTTCTACTGATCTTTTTCCTAATAGCTTAAGTACAGATTCATCAATTGAGCTCATTTCCATGACCGATGCTGCGCCCGCTCCAGATATGCCTACTGTCACACTTATTGGTCTTCCAGCACAAGTCAAGCCTACTGAGCCCATATTGTCCACAAACTCTCGGCCCAATCGCAGTGATAATACGGGAGTTCAGGAGCTCAAGATATACTTGGTCCAGCAATTTAAAATGAAGGATCTTGGCAAATTGAACTATTTTCTTGGGATCGAGGTCCACCATGAGAGTGATGGTATATCACTCTCTCAAGTCAAGTATGCTACTAATTTGATATCCCGAGCTCACCTTTCTGATGAGGAGGTTGAAACTACTCCTATTGAACCAAATGTTCACTATACTACCACTGATGGCACCTTATTGGATAATCCCACTCGTTACCGCTAA 3066 0.3751 MANLRFHFSFSMFLLLCLMIHPTCCHTNFSTDELALRAFRFSVRDPYNHLDDWSNSSSICNWVGVTCDSNYGRVRILDLSEMSLKRTLPSQIGNLSFLVKLYLHSNNFYGELPKELFQLRKLEILNLSYNAFNGVIPTWIGSLSALQHLILNNNSLDGVIPSSISNLSKLESLECRSNFIKGSIPFEIGRLGRLKILRISVNNLSRIIPSAISNLSSLERMILSYNSLSGNIPETIGALTNPKIISLSFNKLSGQIPRTIGNLTLLQELSLDHNNLEGSIPSDICHGLQNVQALHLQANGLSGALPSKWIQCKELKYLQLEYNSFTEEIPKTIGIFIKLKNLSLGVNKLSGQMPKSIGNLTVLQELYLDANNLEGSIPKAIGGLLDLQYLDLQGNELHGLIIDEDILRVNLSSNILVGNVSLRIGNLNALVALDLSRNHISGFIPTTLGGLKNLQDLSLAHNNLQGNIPESFKNMLSLVKLDLFKNNLSGKIPKSLKLLIDLQYVNLSYNKLQGEIPSGGVFKNLTPESFMMNQAHCGVILLRHKRQQNSTSLVRRDLSILGVPIRISYFEIQEATNGFDESNILGRGSYGSVFKGKLSNGIIIVVKIFKFDSQVTLRSFEKECDILRNARHRNLVKVISCCSNVDFKSLVMEFMANGSLEKWLYSHNYFLGYFQRLNIMINVATALEYLHHGLLTPIVHCDLKPSNILMDDEMHLWNYAIRGVYKKKAHRRYVCPTEDMFVEGLNLKSWVVRTGCKAGRMFELTSMHLPEITVPTLCTASTSSSPDSSLDLWHHRLAHPYLSTISQYSCPYTSQQNGRAKHKHRHILDSTRALLISSCCPERFWGEAAITSGNIKFSSLTDLSSFSSSSSPIFIDISTDLFPNSLSTDSSIELISMTDAAPAPDMPTVTLIGLPAQVKPTEPILSTNSRPNRSDNTGVQELKIYLVQQFKMKDLGKLNYFLGIEVHHESDGISLSQVKYATNLISRAHLSDEEVETTPIEPNVHYTTTDGTLLDNPTRYR 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2074 1021 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 422 544 - -
Prci6g2074 1021 SUPERFAMILY Protein kinase-like (PK-like) 560 716 IPR011009 -
Prci6g2074 1021 PANTHER OS04G0122200 PROTEIN 292 715 - -
Prci6g2074 1021 SMART LRR_sd22_2 336 362 - -
Prci6g2074 1021 SMART LRR_sd22_2 143 169 - -
Prci6g2074 1021 SMART LRR_sd22_2 384 404 - -
Prci6g2074 1021 SMART LRR_sd22_2 239 265 - -
Prci6g2074 1021 SMART LRR_sd22_2 451 477 - -
Prci6g2074 1021 Gene3D Ribonuclease Inhibitor 187 264 IPR032675 -
Prci6g2074 1021 SUPERFAMILY L domain-like 408 538 - -
Prci6g2074 1021 Gene3D Ribonuclease Inhibitor 29 186 IPR032675 -
Prci6g2074 1021 Pfam Leucine rich repeat 338 397 IPR001611 GO:0005515
Prci6g2074 1021 Pfam Leucine rich repeat 120 178 IPR001611 GO:0005515
Prci6g2074 1021 Pfam Protein kinase domain 580 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2074 1021 Gene3D Ribonuclease Inhibitor 265 543 IPR032675 -
Prci6g2074 1021 ProSitePatterns Protein kinases ATP-binding region signature. 585 607 IPR017441 GO:0005524
Prci6g2074 1021 SUPERFAMILY Ribonuclease H-like 803 849 IPR012337 -
Prci6g2074 1021 Gene3D Phosphorylase Kinase; domain 1 544 654 - -
Prci6g2074 1021 Gene3D Transferase(Phosphotransferase) domain 1 655 720 - -
Prci6g2074 1021 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Prci6g2074 1021 SMART serkin_6 579 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2074 1021 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 934 1000 IPR013103 -
Prci6g2074 1021 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 184 - -
Prci6g2074 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Prci6g2074 1021 ProSiteProfiles Protein kinase domain profile. 579 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2074 1021 SMART LRR_typ_2 143 167 IPR003591 -
Prci6g2074 1021 SMART LRR_typ_2 451 474 IPR003591 -
Prci6g2074 1021 SMART LRR_typ_2 499 524 IPR003591 -
Prci6g2074 1021 SMART LRR_typ_2 263 287 IPR003591 -
Prci6g2074 1021 SMART LRR_typ_2 95 119 IPR003591 -
Prci6g2074 1021 SMART LRR_typ_2 288 312 IPR003591 -
Prci6g2074 1021 SMART LRR_typ_2 215 239 IPR003591 -
Prci6g2074 1021 SMART LRR_typ_2 191 214 IPR003591 -
Prci6g2074 1021 SMART LRR_typ_2 360 384 IPR003591 -
Prci6g2074 1021 SMART LRR_typ_2 427 450 IPR003591 -
Prci6g2074 1021 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 185 407 - -
Prci6g2074 1021 SUPERFAMILY RNI-like 77 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2074 Prci-Chr6 24933184 24981318 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2074 31 721 Receptor kinase-like Gene Family AT3G47570 32.699 2.55e-119 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2074 Pkinase 2.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2074 - K13420 pcin:129314026 1985.3