Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2073 ATGCAAGCAGCTCAAAGAGTTAGACTCATCAACCAACTTCTTCACAGTTCTCGTAATGGGAGGGAACATGTTGGCGATTTGGTCATCAATCAGAGATTGAAGGTATCTCGTCTTTTGCCTCTTCTTTTCTTGCATTTGATTGTCGATGGAGCCAAGGCCGCCTTCGCCAATTTAGTTTTGTGGGGCAGTGTCCCTTATGTCTTCAAGTATCGATATGTTCTTTCAGGTCATTTACCAAGAAGTATTGGAAACTTGACTGAGCTTCAATTGTTACGTGTTAATACCAACAACTTGGAAGGTTTGATACCTGTGGAAGTAGGCAATCTCCATAAGCTTGAGATCTTGGATTTGTCATATAACAATTTGAGTGGATCTATACCATTGAGAATTTTTAACATTTCAACTTTGAAAATCTTAGATCTTGAAAGCAACTCTATATCAGGTAGTCTTCCAACAAATTGTGGGAATCTCACTAGTTTCTTTAAACTGTCTTTGGGAGAAAACATTTTGACTGGCTCAATTCCAAAAGCAATTGGTGACTTACAGTACCTTCAATATCTGAATCTTGAAGGCAATGAGATACATGGCCTAATCATTGATGAGATATGTGAAATCACAAAGCTTGGCTATTTATCATTAAGGAGAAACAACTTCTCGGGAGGAATGCCACATTGTTTACAAATGTTACCTCTTTACGAGAAGTTTACTTGGACTCCAATAAGCATCATCCCAGAAAGTATGGGTGGCTTGCAAAATTTGCAAATTCTCTCTTTAGCACATAATGAATTGCAAGGATCTATTCCTAGATCATTTGAGAATTTGTTAAGCTTAAAAAATTTAGACCTTTCCCAAAATAATTTGTCTGGGGGGATTCCCAAATCTTTGGAATTGCTTATTGATCTTCAGTATGTCAATCTCTCTTATAACAAACTCCAAGGAGAGATTCCAAGTGGAGGTGTTTTTAAGAATTTGACTCTTGAATCTTTTATGATGAATCAAGCTCTTTGTGGCCAACCACAACTCCAAGTGCCTCCATGCAAAAAAGAATCAAGAAAAAGATCAATGACAAAATTGCTTTTATTGAAATGCACACTACCCATAGTTGTGTCAATAGTTTTGATTGTCTCAGGCATTATTCTTTTAAGACATATTAGACAAAATTCAAAGGGTCAAGTTGAAAAGGACTTGTCAACTTTAGGAGTGCCAAGAAGGATTTCTTACTTTGAAATCCTAGATGCAACCAATGGATTTGATGAGTGTAACATACTTGGAAGGGGCAGTCATGGTCCTGTGTTCAAAGGAAAGCTTTCTAGTGGAATATTCGTTGCAATCAAAACCTTCAATTTTGATTCCCAAGTAATGTTAAGGAGCTTTGAAAAAGAATGTGACATAATGCATAATGTGCGCCATCGCAATTTGGTGAAGGTTATAAGTTGTTGTTCCAATGCTGATTTTAAATCTTTGGCAATGGAGTTTATGCCCAATGGGAACCTTGAAAAATGGTTATATTCTCACAATTATTTTTTAAGCTTTCTTCAAAGATTGAATGTAATGATAAATGTAGCAACTGCTTTAGAGTATTTCCATTATGGCTTGTTAACACCAATTGTTCACTGCGATTTGAAGCCAAGCAACATTTTATTGGATGATGAAATGGTTGCTTATGTAAGTGACTTTGGAATTTCCAAACTTTTAGATAAAGGCGAATCTAAGACATATACAGAGACAATACCTACTATTGGCTATATTGCACCAGAGTATGGATCTTCTGGAATTATTACAACAAAAATAGATGTGTATAGTTATGGAATTATGCTGTTGGAGGTGTTTACAAGAAAAAGGCCCACAGAAGATATATTTGTCTCAGGATTGAGCTTGAAGAGCTGGGTAAGTGAGTCAATGGCACATGCAATAATTCAAGTGATGGATTCCAATTTATTGCAAGGAGATGAACTTCACATAAATAATATATTGACATCTACATCCTCTATTCTTGAATTGGCCTTGAATTGTTGCACCGTTCTTCCAGAAGCACGTGGCAATATGATTGATGTTGTAGTATCATTGAACAAGATTAAGGCCATGTTTATGCATAGGCAGGAGCATCATGTTTAA 2115 0.3622 MQAAQRVRLINQLLHSSRNGREHVGDLVINQRLKVSRLLPLLFLHLIVDGAKAAFANLVLWGSVPYVFKYRYVLSGHLPRSIGNLTELQLLRVNTNNLEGLIPVEVGNLHKLEILDLSYNNLSGSIPLRIFNISTLKILDLESNSISGSLPTNCGNLTSFFKLSLGENILTGSIPKAIGDLQYLQYLNLEGNEIHGLIIDEICEITKLGYLSLRRNNFSGGMPHCLQMLPLYEKFTWTPISIIPESMGGLQNLQILSLAHNELQGSIPRSFENLLSLKNLDLSQNNLSGGIPKSLELLIDLQYVNLSYNKLQGEIPSGGVFKNLTLESFMMNQALCGQPQLQVPPCKKESRKRSMTKLLLLKCTLPIVVSIVLIVSGIILLRHIRQNSKGQVEKDLSTLGVPRRISYFEILDATNGFDECNILGRGSHGPVFKGKLSSGIFVAIKTFNFDSQVMLRSFEKECDIMHNVRHRNLVKVISCCSNADFKSLAMEFMPNGNLEKWLYSHNYFLSFLQRLNVMINVATALEYFHYGLLTPIVHCDLKPSNILLDDEMVAYVSDFGISKLLDKGESKTYTETIPTIGYIAPEYGSSGIITTKIDVYSYGIMLLEVFTRKRPTEDIFVSGLSLKSWVSESMAHAIIQVMDSNLLQGDELHINNILTSTSSILELALNCCTVLPEARGNMIDVVVSLNKIKAMFMHRQEHHV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2073 704 ProSiteProfiles Protein kinase domain profile. 417 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2073 704 SMART LRR_typ_2 250 273 IPR003591 -
Prci6g2073 704 SMART LRR_typ_2 298 323 IPR003591 -
Prci6g2073 704 SMART LRR_typ_2 85 108 IPR003591 -
Prci6g2073 704 SMART LRR_typ_2 109 133 IPR003591 -
Prci6g2073 704 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 493 702 - -
Prci6g2073 704 FunFam Piriformospora indica-insensitive protein 2 78 173 - -
Prci6g2073 704 ProSiteProfiles Leucine-rich repeat profile. 276 298 IPR001611 GO:0005515
Prci6g2073 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Prci6g2073 704 Pfam Leucine Rich repeat 109 124 IPR001611 GO:0005515
Prci6g2073 704 Gene3D Phosphorylase Kinase; domain 1 400 492 - -
Prci6g2073 704 Pfam Protein kinase domain 419 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2073 704 SUPERFAMILY Protein kinase-like (PK-like) 394 695 IPR011009 -
Prci6g2073 704 Gene3D Transferase(Phosphotransferase) domain 1 493 703 - -
Prci6g2073 704 PRINTS Leucine-rich repeat signature 274 287 - -
Prci6g2073 704 PRINTS Leucine-rich repeat signature 112 125 - -
Prci6g2073 704 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Prci6g2073 704 Pfam Leucine rich repeat 135 194 IPR001611 GO:0005515
Prci6g2073 704 SMART serkin_6 417 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2073 704 SUPERFAMILY L domain-like 74 340 - -
Prci6g2073 704 FunFam Leucine-rich repeat receptor-like protein kinase 252 346 - -
Prci6g2073 704 PANTHER OS04G0122200 PROTEIN 73 695 - -
Prci6g2073 704 Gene3D Ribonuclease Inhibitor 70 349 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2073 Prci-Chr6 24900268 24908425 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2073 74 701 Receptor kinase-like Gene Family AT3G47090 34.650 2.49e-117 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2073 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2073 - K13420 pcin:129314025 1383.24