Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2070 ATGGAAATAGGCAATCTCCATAAGCTTAAGATATTATCATTGTCAGATAACAAGTTGAGGGGATCTATTCCGTCCAATATTTTTAACATTTCAACTTTGAGATACTTAAGTCTTGGAAACAATTCTATAATTGGCCATCTTCCATCAAATTTTGGGAATCTCACTAGTTTCTATGAACTATACTTGGGAGAAAATATTTTGACAGGATCAATTCCAAAAGTAATTGGTGGCTTACAGGATCTTCAATATTTGAATCTTGAAGGCAATGAGCTGCATGGCCTAATCATTGATGAGATATGTGAAATCACAAAGCTTGCCTATTTATCATTAAGCAGAAACAAGTTTTCTGGAGGAATACCACATTGTTTAGGAAATGTTACCTCTTTACGAGAACTTTACTTAGACTCTAATAAGTTAATTTTAAAAATACCCTCCTCCTTTTGGAATTTGAAAGACATATTGAAAGTAAACTTATCTTCCAATACTTTAGTTGGAAATGTATCCAGTATTGGAAACTTAAATTCTCTTATATCACTGGATTTGTCAAGAAATTATATTTCAGGCAATATTCCAACATCTTTGGGTGGACTAAAGAACTTGCAAGATCTCTCCTTAGCACATAACAATTTGCAAGGAAATATTCCTAAATCATTTGAAAATATGCTGAGCTTAGTAAATTTAGACCTTTCTGAGAATAATTTAGTTGGTGAGATCCCCAAATCCTTGGAGTCACTTACTTATCTTAAGTATATCAACCTCTCCTACAACAAACTACAAGGAGAGATTCCAAGTGGTGGAGTTTTTGCAAATTTGACTGCTGAATCTTTCATCATGAATGAAGCTCTTTGTGGCCGTCCACAACTAAAAGTGCCTCACTGTGATAAGGGAAGAAGAAAATGTTCATGGGCAAAATCACTTTTACTAAAATGCATATCACCCATGGTTGTGTCAATAATTTTAATTGTCTTGGGCATTATTCTTGTAAGACAAAGGCAATCAAATTTAAGAGAACCAATTGAGAGGGACTTATCTATTTTAGGAGGGCCAAGGAGGATTTCTTATTTTGAAATTCTAGAAGCAACTAATAGATTTGATGAGAGTAACTTTCTTGGAAAGGGGAGTTATGGTGAAGTGTTCAAAGGAAAGCTTTTGAATGGGATGATGGTTCCAATTAAAGTATTTAATTTTGATTCTGAAAAAATGTCAAGGTTCTTTGAAGTGGAATGCAACACAATGCGTAATGTGCGTCATTATAATTTGGTGAAGATCATAAGTAGTTGTTCCAATGTTGATTTCAAATGTTTGATAATGGAGTTCATGCCTAAAGGGAGCCTTGAAAAATGGTTGTATTCTCACAATTATTGTTTGGATTTTTTACAAAGGCTAAATGTAATGATAAATGTGGCATCTGCTTTGGAGTATCTCCATCATGGCTTATCAGCACCAATAGTTCATTGTGACTTGAAGCCAAGTAACATTTTGTTGGATGGTGATATGGTTGCTCATGTGAGTGACTTTGGGATTTCCAAACTTTTAGATGAAGGGCAATCTAAAATACATACAGAAACAATACCTACAATTGGATATATAGCACCTGAATATGGATCTACTGGAGTTGTTTCAACAAAAGTAGATGTGTATAGCTATGGAATTATATTAATGGAAGTGTTCACACGAAAAAAACCAACAGAAGACATGTTTGTCTCAGGATTGAACTTGAAGAATTGGGTAAGTGACTCAATGCTACATGAAATGATTAATGTCATAGATTCCAATTTATTGCAGGGAGATGATCAATATATTGGTGAAATATTGACTTCCGCATCCAGTATTTTTGAATTGGCATTACATTGTTGCAATGATTTTCCTGAAATGCGAAGCAATATGATAGATGTTGTTGTGTCATTAAACAAGATCAAGAACATGATTATGCAAAGACAACATTGTTGA 1950 0.3385 MEIGNLHKLKILSLSDNKLRGSIPSNIFNISTLRYLSLGNNSIIGHLPSNFGNLTSFYELYLGENILTGSIPKVIGGLQDLQYLNLEGNELHGLIIDEICEITKLAYLSLSRNKFSGGIPHCLGNVTSLRELYLDSNKLILKIPSSFWNLKDILKVNLSSNTLVGNVSSIGNLNSLISLDLSRNYISGNIPTSLGGLKNLQDLSLAHNNLQGNIPKSFENMLSLVNLDLSENNLVGEIPKSLESLTYLKYINLSYNKLQGEIPSGGVFANLTAESFIMNEALCGRPQLKVPHCDKGRRKCSWAKSLLLKCISPMVVSIILIVLGIILVRQRQSNLREPIERDLSILGGPRRISYFEILEATNRFDESNFLGKGSYGEVFKGKLLNGMMVPIKVFNFDSEKMSRFFEVECNTMRNVRHYNLVKIISSCSNVDFKCLIMEFMPKGSLEKWLYSHNYCLDFLQRLNVMINVASALEYLHHGLSAPIVHCDLKPSNILLDGDMVAHVSDFGISKLLDEGQSKIHTETIPTIGYIAPEYGSTGVVSTKVDVYSYGIILMEVFTRKKPTEDMFVSGLNLKNWVSDSMLHEMINVIDSNLLQGDDQYIGEILTSASSIFELALHCCNDFPEMRSNMIDVVVSLNKIKNMIMQRQHC 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2070 649 Gene3D Phosphorylase Kinase; domain 1 347 439 - -
Prci6g2070 649 SUPERFAMILY Protein kinase-like (PK-like) 341 641 IPR011009 -
Prci6g2070 649 Gene3D Ribonuclease Inhibitor 1 300 IPR032675 -
Prci6g2070 649 ProSiteProfiles Protein kinase domain profile. 364 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2070 649 Pfam Protein kinase domain 366 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2070 649 Pfam Leucine rich repeat 32 91 IPR001611 GO:0005515
Prci6g2070 649 Pfam Leucine rich repeat 199 258 IPR001611 GO:0005515
Prci6g2070 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Prci6g2070 649 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 440 648 - -
Prci6g2070 649 Gene3D Transferase(Phosphotransferase) domain 1 440 648 - -
Prci6g2070 649 SMART LRR_typ_2 221 245 IPR003591 -
Prci6g2070 649 SMART LRR_typ_2 173 196 IPR003591 -
Prci6g2070 649 SMART LRR_typ_2 126 149 IPR003591 -
Prci6g2070 649 SMART LRR_typ_2 197 220 IPR003591 -
Prci6g2070 649 SMART LRR_typ_2 6 30 IPR003591 -
Prci6g2070 649 SUPERFAMILY L domain-like 3 289 - -
Prci6g2070 649 Pfam Leucine Rich Repeat 128 150 IPR001611 GO:0005515
Prci6g2070 649 SMART LRR_sd22_2 126 152 - -
Prci6g2070 649 SMART LRR_sd22_2 197 223 - -
Prci6g2070 649 SMART LRR_sd22_2 6 32 - -
Prci6g2070 649 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Prci6g2070 649 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 2 297 - -
Prci6g2070 649 SMART serkin_6 364 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2070 649 PANTHER OS04G0122200 PROTEIN 45 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2070 Prci-Chr6 24790022 24792723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2070 5 645 Receptor kinase-like Gene Family AT3G47570 36.647 3.35e-125 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2070 Pkinase 6.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2070 - K13420 pcin:129314025 801.971