Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2064 ATGTCAACTTTGCAAGTGTTGGAACTTTCAAATAATTCTTTATCAAGTAGCCTTCCATCAGATTTTGGATGTGGCCTTCCTAATCTTGAAAAGCTATATTTATGGGGCAACAAACTTTCTGGAAATATCCCAAATACTATTTCCAATGCCTCTAAGCTGGCCATTTTGGGGTTGGAGGAAAATAATTTTAGAGGGGTTTTACCAAGAACACTTGGGGATTTAAAATACTTGGAAATCCTTCAAATAAATGGTAACAGTTTAACCACATCAGATAGTTCCAATTCCAAAACCAACTTTATTACCTCATTGACTAATTGCAGGCATTTGAATATTTTGGATCTCTCAATGAATCCATTGTATATAAAACTTCCCAAGTCCATTGGAAACTTCTCTGCTTCTCTACAAGAGTTGGACATAAACTCTTGTGGTATTAATGATAACATACCATCAGAAATCGGGAATCTTACTAAATTGATTAGACTATCTTTGGATGAAAATGTTTTGAAAGGACCAATTCCAATAACAATTGGTAGCTTACATGCTCTTCAGTTTTTGAGCCTCAAAGGCAACAACTTGCATGGTTTAGTTGTTGATGAGCTTTGTGAGATCAAACCACTTGGCTATTTACATCTAAGCCAAAACAAGTTTTTTGGAGCAATGCCACCTTGTTTAGGAAATATTTCCTCTTTAAGAGAACTTCACTTGGGCTCTAATAAGATGGCTTTTGAGATACCATCTTCCTTTTGGAATTTGAAAGATATATTGCAAGTAAACTTGTCTTCCAATCAATTTTTTGGGAATATTTCATCAAGGGTTGGGAGCTTAAAAGCTCTTACTTTATTTGATTTATCCAAAAATCATATTTCAGGCATCATTCCAACAACTATAGGCGGCTTGCAAAATCTACAAATTCTCTATTTAGCGCATAATGAATTGCAGGGATCTATTCCTATTTCATTTGGGAATTTGATAAGCTTGAAAAATTTAGACCTTTCCCAAAACAATTTGTCTGGGGAGATTCCTAAATCTTTGGAATTACTTATTGATCTTAAGTATATCAATCTCTCTTATAACAAACTCCAAGGGGAGATTCCAAGTGGAGGAGTTTTTAAAAATTTGACTCCAAAATCTATTATGATGAATCAAGCTCTTTGTGGCAACCTGCAATTCCAAATGCCTCCTTGTAGAAAGGAAACAAGACAAAGATTCACGATAAAATATCTTTTATTGAAATGCATATTACCCATAGTTATGTCAATAATTTTGGTTGTCTCAGGCATTATCCTTTTAAGACATAAACGACAGAATTCAAGAGGACTAGTTGAAAGGGATTTCCCAACTTTAGGAGTGCCAAGAAGGATTTCTTATTTTGAAATCCAAGAAGCAACCAATGGATTTGATGAGAGTAACATACTAGGAAGGGGAAGTTTTGGTTCTGTGTTCAAAGGAAAGCTTTCAAGTGGAATGATTGTTGCAGTTAAGATCTTCAATGTTGATTCACAAGTAATGTTAAGGAGCTTTGAACAAGAATGTGACATACTGCGTAATGTGCGTCATCACAATTTGGTAAAGGTTATAAGCTGTTGCTCTAATGATGTTTTCAAATCTTTGGTAATGGAGTTCATGCCCAAAGGGAGCCTTGAGAAATGGTTATATTCTCACAACTATTTTTTAGATTTTTTTCAAAGGTTGAATATAATGATAAATGTAGCATCTGCTTTGGAGTATCTCCATCATGGCTTGCGAGCACCAATTGTTCACTGCGATTTGAAGCCCAGTAATATTTTACTGGATGATGAAATGATTGCTCATGTAAGTGACTTTGGAATTTCCAAAATTTTTAATGAAGGGGAATCTAAGACACACGGGGAGACAATACCTACCATTGGCTATATTGCACCTGAGTATGGATCTTCTGGAGTTGTTTCAACAAAAATAGATGTGTATAGCTATGGAATTATGCTATTAGAGGTGTTTACAAGAAAAAGGCCAACAGAAGATATATTTGTCTCAGGATTGAGCTTGAAGAGTTGGAAGTACGTGGCAATATGA 2052 0.3504 MSTLQVLELSNNSLSSSLPSDFGCGLPNLEKLYLWGNKLSGNIPNTISNASKLAILGLEENNFRGVLPRTLGDLKYLEILQINGNSLTTSDSSNSKTNFITSLTNCRHLNILDLSMNPLYIKLPKSIGNFSASLQELDINSCGINDNIPSEIGNLTKLIRLSLDENVLKGPIPITIGSLHALQFLSLKGNNLHGLVVDELCEIKPLGYLHLSQNKFFGAMPPCLGNISSLRELHLGSNKMAFEIPSSFWNLKDILQVNLSSNQFFGNISSRVGSLKALTLFDLSKNHISGIIPTTIGGLQNLQILYLAHNELQGSIPISFGNLISLKNLDLSQNNLSGEIPKSLELLIDLKYINLSYNKLQGEIPSGGVFKNLTPKSIMMNQALCGNLQFQMPPCRKETRQRFTIKYLLLKCILPIVMSIILVVSGIILLRHKRQNSRGLVERDFPTLGVPRRISYFEIQEATNGFDESNILGRGSFGSVFKGKLSSGMIVAVKIFNVDSQVMLRSFEQECDILRNVRHHNLVKVISCCSNDVFKSLVMEFMPKGSLEKWLYSHNYFLDFFQRLNIMINVASALEYLHHGLRAPIVHCDLKPSNILLDDEMIAHVSDFGISKIFNEGESKTHGETIPTIGYIAPEYGSSGVVSTKIDVYSYGIMLLEVFTRKRPTEDIFVSGLSLKSWKYVAI 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2064 683 Pfam Leucine Rich Repeat 325 345 IPR001611 GO:0005515
Prci6g2064 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Prci6g2064 683 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524
Prci6g2064 683 SMART LRR_typ_2 26 50 IPR003591 -
Prci6g2064 683 SMART LRR_typ_2 275 298 IPR003591 -
Prci6g2064 683 SMART LRR_typ_2 1 24 IPR003591 -
Prci6g2064 683 SMART LRR_typ_2 299 322 IPR003591 -
Prci6g2064 683 SMART LRR_typ_2 227 250 IPR003591 -
Prci6g2064 683 SMART LRR_typ_2 323 347 IPR003591 -
Prci6g2064 683 SMART LRR_typ_2 179 202 IPR003591 -
Prci6g2064 683 Pfam Leucine rich repeat 27 87 IPR001611 GO:0005515
Prci6g2064 683 Pfam Leucine rich repeat 274 312 IPR001611 GO:0005515
Prci6g2064 683 SUPERFAMILY L domain-like 2 195 - -
Prci6g2064 683 ProSiteProfiles Protein kinase domain profile. 466 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2064 683 Pfam Protein kinase domain 467 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2064 683 FunFam Os07g0541700 protein 542 630 - -
Prci6g2064 683 SUPERFAMILY L domain-like 133 386 - -
Prci6g2064 683 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 90 - -
Prci6g2064 683 FunFam Serine-threonine protein kinase plant-type 448 541 - -
Prci6g2064 683 Gene3D Ribonuclease Inhibitor 95 404 IPR032675 -
Prci6g2064 683 Gene3D Ribonuclease Inhibitor 1 94 IPR032675 -
Prci6g2064 683 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 102 399 - -
Prci6g2064 683 SUPERFAMILY Protein kinase-like (PK-like) 447 668 IPR011009 -
Prci6g2064 683 PANTHER OS04G0122200 PROTEIN 1 668 - -
Prci6g2064 683 ProSiteProfiles Leucine-rich repeat profile. 325 347 IPR001611 GO:0005515
Prci6g2064 683 SMART serkin_6 466 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2064 683 Gene3D Transferase(Phosphotransferase) domain 1 542 681 - -
Prci6g2064 683 Gene3D Phosphorylase Kinase; domain 1 449 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2064 Prci-Chr6 24139097 24142086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2064 1 683 Receptor kinase-like Gene Family AT3G47570 39.301 4.11e-153 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2064 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2064 - K13420 qsa:O6P43_031966 757.673