Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2055 ATGCCAGATACTATTTCCAATGCCTCTAAGCTGACCATTCTAGCATTGACAGAAAACAATTTCAAAGGAGTTTTACCAAGCACACTTGGGGATTTAAGATACTTGAAAAAACTTGGAATAGAGGGTAATAGTTTCACCACATCAGATGCTTCCAATTCTAAAACCAACTTGATTACCTCATTGACTAATTGTAGACATTTGGAATTTTTGTTCCTCTCAGCAAATCCATTTTTTATAAAACTTCCCAAGTCCATTGGAAACTTTTCTGATTCTCTACAGGAGTTGGACATTGTTTCTTGTGGTATCAATGGTAACATACCATCAGAAATAGGGAATCTTACTAATTTGATTAAACTATCTTTGGATGAAAATGTTTTGAATGGACCAATCCCAATAACAATTAGCAACTTACAAGCTCTGCAGTATTTGAGTCTCGAAGGCAATGACTTGCATGGCTTAATTGTTCATGACCTTTGTGAAATCAAACCACTTGGTTATTTACATCTAAGCCGAAACAAGTTTTCTGGAGCAATGACACCTTGTTTAGGAAATCTTTCTTCTTTAAGAGAACTTCACTTGGGCTCAAATAAGATGGCTTTAGAGATACCATCATCCTTTTGGAATTTGAAAGACATACTGGAAGTAAACTTGTCTTCCAACCATTTTGTTGGGAATCTTTCATCAAGGGTTGAGAACTTAAAAGCTCTTTCTTTATTAGATTTATCTCAAAATCATATTTCAAGCAGCATTCCAACAACTATGGGCAGTTTGCAAAATCTGCAAATTCTCTCTCTTGCACATAACAAATTGGAAGGATCTATTCCTAGATCACTTGGGAATTTGCTAAATTTAGAAAATTTAGACCTTTCCCAAAATAATTTGTCTGGGAAGATTCCTAAATCTTTGGAGTTACTTATTGATCTTAAGTATGTCAATCTCTCTTTTAACAAACTCCAAGGAGAGATTCCAGATAGAGGTGTTTTTAAAAATTTGACTCCTGAATCTTTTATGATGAATCTAGCTCTCTGTGGTCTGCCACAACTCCAAGTGCCTCCATGCAAAAAAGAAACAGGAGAAAGATCAATGACAAAATTTCTTTTATTGAAATGCATACTACCCATAGTTGTGTCAATAATTTTGGTTGTTTTAGGCATTATCCTTTTAAGGCTTAAACGAAAAAATTCAAGGTGTCTAGCTGAAAGGGATTTATCAACTTTAGGAATGCCAAGAAGGATTTCTTATTTTGAAATCCTAGAAGCAACCAATGGATTTGATGAGAGCAACATACTTGGAAGAGGTAGTTATGGTACTGTTTTCAAAGGAAAGCTTTCTAGTGGAATGGTTGTTGCAGTTAAGATATTCAATTTTGATTCGCAAGTAATGGTAGCAAGCTTTGAAAAAGAATGTGACATACTGCGTAATGTGCGCCATCGCAATCTAGTGAAGGTTATAAGTTGTTGTTCTAATGTTGATTTCAAATCTTTAGTAATGGAGTTCATGCCCAATGGGAGCCTTGAAAAATGGTTATATTCTCACAACTATTTTTTAGGTTTTCTTCAAAGGTTGGATATAATGATAAATGTAGCATTTGCTTTGGAGTATCTCCATCATGGCTTGCTAGCACCAATTATCCACTGCGATTTAAAGCCAAGTAACATTTTATTGGATGATGAAATGATTGCTCATGTGAGCGACTTTGGAATTTCCAAACTTTTAAATGAAGGGGAATCTAAAACATACACAGAGACTATACATACAATTGGCTATATGGCACCTGAGTATGGATCTTCTGGAGTTGTTTCAACAAAAATAGATGTGTATAGCTATGGAATTATGCTATTGGAGGTGTTTACAAGAAAAAGGCCCACAGAAGATATATTTGTCTCTGCATTGAGCTTGAAGAGCTGGGTAAGTGAGTCAATGCCACATGCAATAATTCAAGTCATGGATTCCAATTTATTGCAAGGAGTTCATGAACATCATATAAACAATATATTGACATCTACATTCTCCATTCTTGAATTGGCCTTAAATTGTTGCACCGATCTTCCAGAAGCACGTGGCAATATGATTGATGTTGCAGCATCATTGAACAAGATCAAGGCCATGTTTTTGCATAAGCGCCATGTTTAA 2133 0.3526 MPDTISNASKLTILALTENNFKGVLPSTLGDLRYLKKLGIEGNSFTTSDASNSKTNLITSLTNCRHLEFLFLSANPFFIKLPKSIGNFSDSLQELDIVSCGINGNIPSEIGNLTNLIKLSLDENVLNGPIPITISNLQALQYLSLEGNDLHGLIVHDLCEIKPLGYLHLSRNKFSGAMTPCLGNLSSLRELHLGSNKMALEIPSSFWNLKDILEVNLSSNHFVGNLSSRVENLKALSLLDLSQNHISSSIPTTMGSLQNLQILSLAHNKLEGSIPRSLGNLLNLENLDLSQNNLSGKIPKSLELLIDLKYVNLSFNKLQGEIPDRGVFKNLTPESFMMNLALCGLPQLQVPPCKKETGERSMTKFLLLKCILPIVVSIILVVLGIILLRLKRKNSRCLAERDLSTLGMPRRISYFEILEATNGFDESNILGRGSYGTVFKGKLSSGMVVAVKIFNFDSQVMVASFEKECDILRNVRHRNLVKVISCCSNVDFKSLVMEFMPNGSLEKWLYSHNYFLGFLQRLDIMINVAFALEYLHHGLLAPIIHCDLKPSNILLDDEMIAHVSDFGISKLLNEGESKTYTETIHTIGYMAPEYGSSGVVSTKIDVYSYGIMLLEVFTRKRPTEDIFVSALSLKSWVSESMPHAIIQVMDSNLLQGVHEHHINNILTSTFSILELALNCCTDLPEARGNMIDVAASLNKIKAMFLHKRHV 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2055 710 Pfam Protein kinase domain 425 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2055 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Prci6g2055 710 SMART serkin_6 424 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2055 710 Gene3D Phosphorylase Kinase; domain 1 396 499 - -
Prci6g2055 710 SMART LRR_typ_2 185 208 IPR003591 -
Prci6g2055 710 SMART LRR_typ_2 305 330 IPR003591 -
Prci6g2055 710 SMART LRR_typ_2 233 256 IPR003591 -
Prci6g2055 710 SMART LRR_typ_2 257 281 IPR003591 -
Prci6g2055 710 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524
Prci6g2055 710 PANTHER OS04G0122200 PROTEIN 1 705 - -
Prci6g2055 710 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 500 709 - -
Prci6g2055 710 SUPERFAMILY RNI-like 2 324 - -
Prci6g2055 710 PRINTS Leucine-rich repeat signature 236 249 - -
Prci6g2055 710 PRINTS Leucine-rich repeat signature 281 294 - -
Prci6g2055 710 FunFam Serine-threonine protein kinase plant-type 404 499 - -
Prci6g2055 710 ProSiteProfiles Leucine-rich repeat profile. 283 305 IPR001611 GO:0005515
Prci6g2055 710 Gene3D Transferase(Phosphotransferase) domain 1 500 708 - -
Prci6g2055 710 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 60 357 - -
Prci6g2055 710 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Prci6g2055 710 ProSiteProfiles Protein kinase domain profile. 424 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2055 710 SUPERFAMILY Protein kinase-like (PK-like) 405 697 IPR011009 -
Prci6g2055 710 Gene3D Ribonuclease Inhibitor 1 361 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2055 Prci-Chr6 23034066 23036972 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2055 1 705 Receptor kinase-like Gene Family AT3G47570 38.806 1.15e-144 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2055 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2055 - K13420 pcin:129314025 810.061