Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2052 ATGTCGACTGCCTCTCTTTTCCTTCCTCATATTCACGCGGTGACACTTTCTTCTCCATATGTTTTGAATCTGCTGATCTGTGTGTACTGTTGGAGCTTTAAGCTCTGCCTTTCATTTGTTTCAACTGATCAGGATGTTTGGAAGAAGGGAAGCTCAAATAGAGTCATAAGAAATGAGTTTGGAGCCTTAAGGATACTACAGATGGCTAATGCAATTGAAAGGGAACTTGAGGATTGTCCTGAAATGTTAGAGATATTGAAAAGTAATGCAGAGAAGCCCTTGTACGCTGGTTACACTGAATTCACAAAGTTGTCAGCAATGTTGAAATTGTACAACTTGAAATTTTCTGTTAAGGACCCTTACAATTACTTGGCCAATTGGTCCAACTCTTCTTCCATTTGCAATTGGGTTGGGGTTATGTGTGATGCTCACCATGAGAGAGTAATAGCCTTGAATCTTGGTGAGATGGGTCTCAAGGGAACTTTGCCCTCAAAAATTGGGAATTTGTCTTTCTTGGTTGAACTTGACCTTCATAGTAACAACCTTTATGGTGAGTTGCCAAAAGAGTTGATCCAATTACACAAGCTACAAATTCTCAACTTGAGCTACAATGAATTCAAGGGAGAAATTCCAACTTGGATTGGAAGCTTATTCATGCTTCAACACTTCCATCTCTGTAACAACATTTTTGGAGGTGTTATTCCTAAAAGCATATCCAATTTGTCAAAGTTAGAGACTTTGAACTGGAATGATAACTTTATTGAAAGATTCATTCCATTTGAGATTGGAAAACTTCAATGTTTGAAGATTTTACGGATTGCGGTAAACAAGCTTTCAGGAAAAATACCTCCAACTATTTCCAACTTATCCTCACTTGAGTTGTTGTCTTTGTCTCGCAACTTCTTAACAGGAGATATTCCGAATGAGATTGGCAATCTTACAAATCTTAAAATTATGTACTTGAGTCGAAATCAACTCATTGGCTACATACCTAGAAGCATTGGAAGTTTGGTTTCGCTTCAGGAATTAGCGCTTGGTTCCAATAATTTACAAGGTGATATACCAGAAGATATTGGACAATTGGACTTGCTTCAAGTGCTAGGTCTTGAAAATAATAGTTTACAAGGAGATATTCCAAGAGAGATTGGCCATCTCCAAAATCTAAAGCTTCTATATTTGGATGGAAATAAGCTTTCTGGCCAAATACCATCAAATATCTTCAATATTTCAGAGTTACAAGTGATTGATTTAAGCTGGAATGATTTGTCCGAAAGTATTCCCTCAAGTGTATGTCATGGACTTCCAAAATTACAAGGGCTATATCTTCAAGAAAATGCATTATCTGGAGCCCTCCCATCCAATTGGATACAATGCAAAGAGCTCGAAGACTTACAATTAGAATACAACTCTTTTACAGGAGATATTCCCAAAGAGATTGGTAATCTTGAAAGTCTGGAAATTTTACATTTAGGCGGAAATAAGTTTTCTGCCCAAATTTCATTTGCTATCTTTAATATATCTGAGTTGCGGGATATTGATTTAAGTTGGAATAATTTGTCGGGAGGCATTCCTTCTAATATATGCAATGGACTTCCAAATTTACAATATTTGAGTCTTCACGTCAACAAATTATTTGGACCAATACCATCTGGTTGGACACAATGCAAAGACCTGAAAAACTTAACATTAGAAGACAACTTTCTCAAAGGTCATATACCCAAAAGTATTGGAAATTTGACCATGCTTCAAAAGTTAACTGTGGGTTCCAATAATTTGGAAGGTTTAATACCTATGGAAATAGGCAATCTCCATAAGCTTGAGATCTTAGATTTGACGTATAACAAGTTGAGCGGATCTATTCCATCCAACATTTTTAACATTTCAACTTTGAGATACTTAAATCTTGGAAGCAATTCTATAATTGGCAATCTTCCATCAAATTTCGGGAATCTCACTAGTTTCTATGAACTATCCTTGGGAGAAAATATGTTGACAGGATCAATTCCAAAAGTAATTGGTGGTTTACAGGGTCTTCAATATTTGAATCTTGAAGGCAATGAGCTACATGGCCTAATCATTGATGAGATATGTGAAATCACAAAGCTTGCCTATTTATCATTAAGCAGAAACAAGTTTTTTGGAGAAATGCCACATTGTTTAGGAAATGTTACCTCTTTACGAGAACTTTACTTGGACTCTAATAAGTTAATTTTAAAAATACCCTCCTCCTTTTGGAATTTGAAGGATATATTGAAAGTAAACTTATCTTCCAATATTTTAGTTGGAAATGTATCATCAAGTATTGGAAACTTAAATGCTCTTATATCACTAGATTTGTCAAGAAATCATATTTCAGAAAATATTCCAACATCTTTGGGTGGACTAATGAACTTGCAAGATCTCTCCTTAGCACACAACAATTTGCAAGGAAATATTCCTAAATCATTTGGAAATATGCTGAGCTTAGTAAATTTGGACCTTTCTAAGAATAATTTATCCGGTGAGATCCCCAAATCCTTAGAGTCACTTACTTATCTTAAGTATATCAATCTCTCCTACAACAAACTACAAGGAGAGATTCCAAGTGGTAGAGTTTTTGCAAATTTGACTGCTGAATCTTTCATGATGAATGAAGCTCTTTGTGGCCTTCCACAACTAAAAGTGCCTCCTTGTGAAAAAGGAAGAAGAAAATGGTCATGGGCAAAATCACTTTTACTAAAATGCATATCACCCATTGTTGTGTCAACAATTTTAATTGTCTTAGGTATTATCCTTTTAAGACATAGACATTCAAATTTAAGGGAACCAATTGAGAGGGGTTTATCTATTTTAGGAGGGCCAAGGAGGATTTCATATTTTGAAATTTTGGAGGCCACTAATGGATTTGATGAGAGTAACATTCTTGGAAAGGGGAGTTATGGTGAAGTGTTCAAAGGAAAGCTTTTGAATGGGATGACTGTTGCAATTAAAGTATTTAATTTTGATTCTGAAAAAATGTCAAGGTGCTTTGAAGTGGAATGCAACACAATGCGTAATGTGCGTCATTATAATTTGAACATCGTAAGTTGTTGTTCCAATGTTGATTTCAAATGTTTGATAATGGAGTTCATGCCTAAAGGGAGCCTTGAAAAATGGTTGTATTCTCACAATTATTGTTTGGACTTTTTACAAAGGCTCAATGTAATGATAAATGTAGCATTTGTTTTGGAATATCTCCATCATGGCTTGTCAACACCAATAGTTCATTGCGATTTGAAGCCAAGTAACATTTTGTTGGATGGTGATATGGTTGCTCATGTGAGTGACTTTGGAATTTCCAAACTTTTAGATGAAGGGCAATCTAGAATACATACAGAGACAATACCTACAATTGGATATATAGCACCTGAATATGGATCTACTAGAGTTGTTTCAACAAAAGTAGATGTGTATAGCTATGGAATTATATTAATGGAAGTGTTCACACGAAGAAAACCAACAGAAGACATGTTTGTTGCAGGATTGAACTTGAAGAGTTGGGTGAGTGACTCAATGCTACATGAAATAATTAATGTCATAGATTCCAATTTATTGCAGGGTGATGATCAGTATATTGGTGATATATTGACTTCTACATCCAGTATTTTTGAATTGGCATTAAATTGTTGCATTGATTTTCTTGAAATGCGAAGCAACATGACAGATGTTGTTGTGTCATTAAACAAGATCAAGAACATGATTATGCAAAGGCAACATCATTGA 3741 0.3518 MSTASLFLPHIHAVTLSSPYVLNLLICVYCWSFKLCLSFVSTDQDVWKKGSSNRVIRNEFGALRILQMANAIERELEDCPEMLEILKSNAEKPLYAGYTEFTKLSAMLKLYNLKFSVKDPYNYLANWSNSSSICNWVGVMCDAHHERVIALNLGEMGLKGTLPSKIGNLSFLVELDLHSNNLYGELPKELIQLHKLQILNLSYNEFKGEIPTWIGSLFMLQHFHLCNNIFGGVIPKSISNLSKLETLNWNDNFIERFIPFEIGKLQCLKILRIAVNKLSGKIPPTISNLSSLELLSLSRNFLTGDIPNEIGNLTNLKIMYLSRNQLIGYIPRSIGSLVSLQELALGSNNLQGDIPEDIGQLDLLQVLGLENNSLQGDIPREIGHLQNLKLLYLDGNKLSGQIPSNIFNISELQVIDLSWNDLSESIPSSVCHGLPKLQGLYLQENALSGALPSNWIQCKELEDLQLEYNSFTGDIPKEIGNLESLEILHLGGNKFSAQISFAIFNISELRDIDLSWNNLSGGIPSNICNGLPNLQYLSLHVNKLFGPIPSGWTQCKDLKNLTLEDNFLKGHIPKSIGNLTMLQKLTVGSNNLEGLIPMEIGNLHKLEILDLTYNKLSGSIPSNIFNISTLRYLNLGSNSIIGNLPSNFGNLTSFYELSLGENMLTGSIPKVIGGLQGLQYLNLEGNELHGLIIDEICEITKLAYLSLSRNKFFGEMPHCLGNVTSLRELYLDSNKLILKIPSSFWNLKDILKVNLSSNILVGNVSSSIGNLNALISLDLSRNHISENIPTSLGGLMNLQDLSLAHNNLQGNIPKSFGNMLSLVNLDLSKNNLSGEIPKSLESLTYLKYINLSYNKLQGEIPSGRVFANLTAESFMMNEALCGLPQLKVPPCEKGRRKWSWAKSLLLKCISPIVVSTILIVLGIILLRHRHSNLREPIERGLSILGGPRRISYFEILEATNGFDESNILGKGSYGEVFKGKLLNGMTVAIKVFNFDSEKMSRCFEVECNTMRNVRHYNLNIVSCCSNVDFKCLIMEFMPKGSLEKWLYSHNYCLDFLQRLNVMINVAFVLEYLHHGLSTPIVHCDLKPSNILLDGDMVAHVSDFGISKLLDEGQSRIHTETIPTIGYIAPEYGSTRVVSTKVDVYSYGIILMEVFTRRKPTEDMFVAGLNLKSWVSDSMLHEIINVIDSNLLQGDDQYIGDILTSTSSIFELALNCCIDFLEMRSNMTDVVVSLNKIKNMIMQRQHH 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2052 1246 Gene3D Ribonuclease Inhibitor 621 898 IPR032675 -
Prci6g2052 1246 Gene3D Ribonuclease Inhibitor 362 620 IPR032675 -
Prci6g2052 1246 SMART serkin_6 962 1240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2052 1246 Gene3D Ribonuclease Inhibitor 256 357 IPR032675 -
Prci6g2052 1246 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 503 1235 - -
Prci6g2052 1246 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 104 257 - -
Prci6g2052 1246 FunFam Piriformospora indica-insensitive protein 2 258 348 - -
Prci6g2052 1246 SMART LRR_sd22_2 819 845 - -
Prci6g2052 1246 SMART LRR_sd22_2 385 411 - -
Prci6g2052 1246 SMART LRR_sd22_2 723 749 - -
Prci6g2052 1246 SMART LRR_sd22_2 603 629 - -
Prci6g2052 1246 SMART LRR_sd22_2 265 291 - -
Prci6g2052 1246 SMART LRR_sd22_2 313 339 - -
Prci6g2052 1246 SMART LRR_sd22_2 771 790 - -
Prci6g2052 1246 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 349 527 - -
Prci6g2052 1246 Pfam Leucine rich repeat 339 398 IPR001611 GO:0005515
Prci6g2052 1246 Pfam Leucine rich repeat 558 616 IPR001611 GO:0005515
Prci6g2052 1246 Pfam Leucine rich repeat 629 688 IPR001611 GO:0005515
Prci6g2052 1246 Pfam Leucine rich repeat 797 856 IPR001611 GO:0005515
Prci6g2052 1246 Gene3D Transferase(Phosphotransferase) domain 1 1037 1246 - -
Prci6g2052 1246 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1037 1246 - -
Prci6g2052 1246 SMART LRR_typ_2 385 409 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 603 627 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 819 843 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 410 433 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 579 602 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 771 795 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 531 555 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 723 746 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 337 361 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 169 193 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 289 313 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 482 506 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 507 530 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 675 699 IPR003591 -
Prci6g2052 1246 SMART LRR_typ_2 434 458 IPR003591 -
Prci6g2052 1246 Pfam Leucine rich repeat N-terminal domain 110 142 IPR013210 -
Prci6g2052 1246 SUPERFAMILY Protein kinase-like (PK-like) 943 1233 IPR011009 -
Prci6g2052 1246 ProSiteProfiles Protein kinase domain profile. 962 1246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2052 1246 SUPERFAMILY L domain-like 505 669 - -
Prci6g2052 1246 FunFam Leucine-rich repeat receptor-like protein kinase TDR 618 893 - -
Prci6g2052 1246 Pfam Protein kinase domain 963 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2052 1246 ProSitePatterns Protein kinases ATP-binding region signature. 968 990 IPR017441 GO:0005524
Prci6g2052 1246 SUPERFAMILY RNI-like 151 496 - -
Prci6g2052 1246 SUPERFAMILY L domain-like 624 885 - -
Prci6g2052 1246 Pfam Leucine Rich Repeat 725 747 IPR001611 GO:0005515
Prci6g2052 1246 Gene3D Phosphorylase Kinase; domain 1 945 1036 - -
Prci6g2052 1246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1080 1092 IPR008271 GO:0004672|GO:0006468
Prci6g2052 1246 Gene3D Ribonuclease Inhibitor 105 255 IPR032675 -
Prci6g2052 1246 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 528 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2052 Prci-Chr6 22558704 22621926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2052 119 1237 Receptor kinase-like Gene Family AT5G46330 32.231 2.91e-167 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2052 Pkinase 5.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2052 - K13420 gmx:100784397 1092.03