Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2047 ATGGGTCATTTACCAAGAAGTATTGGAAACTTGACTGAGCTTCAATTGTTACGTCTTATTGCCAATAACTTGGAAGGAAATATTCCTCAAACAATTGGTGAGCTCACAAACTTGAAAATTATACAATTCTTATCTAACAAGTTGTCTGGCCAAATACCAAGGAATTTTGGAAACTTGACAAAACTTCAAGAGCTAGACCTTGGTGAATATAACATTGAAGGAGATCTACCAGGAGATATTGGAAACTTAACCATGCTTCAAATGTTAACTCTTGGTTACAATAACTTAAAAGGTAATATTCCATCAAATTATGGGAACCTCACTAATTTGTATAAACTCTCTATAGAAGAAAACAGTTTGATTGGAAGGATTCCAACAACAATTAGTAGCATACAAGATCTTCAGTATTTGAGTCTTGAAGGTAATAAGCTACATGGTGCAATCATTGAAGAGCTATGTGGAATGCCAAGACTTGCTTATTTATATCTAAGTGAGAACAAGTTTTCTGGATCAATGCCGCATTGCATGGGAAATGTTACCTCCTTACGAGAACTTCACCTGGACAATAACAAGTTAACTTCAGAAATTCCCTTTTCTTTTTGGAATTTGAAGGACATATTGATCATAAACTTGTCTTCAAATAGTTTAGTTGGAAATCTATCACTCAATATCGGCAACTTAAAAGCTCTTGTGTCATTGGATTTGTCAAGAAATCATATTTTAGGAATCATTCCCTCAACCATGGATAGCTTGCAAACTTTGCAAAATCTCTCCTTAGCATATAACAATTTGCGAGGAAATATTCCCAAATTACTCGGAAATATTCCAAGTTTAATGAATTTGGACCTTTCCCATAATAATTTGTCTGGTGAGATTCCCAAAAATTTGGAGTCACTTGTTTATCTAAAGTTTATCAATCTCTCATTTAACAAACTACAAGGAGAGATTCCCAGTGGAGGTGTTTTCAAAAATTTGACTGCTGAATCTTTTATGATTGATGAAGCTCTTTGTGGTAAACAAGAACTAAAAGCATCCTCTTTTAAACAAAGACAACCAAATTCATGGGATTCTTTCGAAAGGGACTCACCAATTTTAGGAGGACAAAGAAGGATTTCTTATTTTGAAATTCTAGAAGCAACTAATGGATTTGATGAGAGTAACTTTATTGGAAGTGGGAGTTATGGTGATGTGTTCAAAGGAAAGCTTTTGAATGGGATGATGGTTGCAATTAAAGTATTTAATTTTGATTCTGAGAAAATGTCAAGGAGCTTTGAAGTGGAATGCAACACAATGCGCAATGTGTGCCATTATAATTTGGTGAAGATCATAAGTAGTTGTTCCAATGTTGATTTCAAGTGCCTGATAATGGAGTTCATGCCTAAAGGGAGTCTTGAAAAATGA 1401 0.3433 MGHLPRSIGNLTELQLLRLIANNLEGNIPQTIGELTNLKIIQFLSNKLSGQIPRNFGNLTKLQELDLGEYNIEGDLPGDIGNLTMLQMLTLGYNNLKGNIPSNYGNLTNLYKLSIEENSLIGRIPTTISSIQDLQYLSLEGNKLHGAIIEELCGMPRLAYLYLSENKFSGSMPHCMGNVTSLRELHLDNNKLTSEIPFSFWNLKDILIINLSSNSLVGNLSLNIGNLKALVSLDLSRNHILGIIPSTMDSLQTLQNLSLAYNNLRGNIPKLLGNIPSLMNLDLSHNNLSGEIPKNLESLVYLKFINLSFNKLQGEIPSGGVFKNLTAESFMIDEALCGKQELKASSFKQRQPNSWDSFERDSPILGGQRRISYFEILEATNGFDESNFIGSGSYGDVFKGKLLNGMMVAIKVFNFDSEKMSRSFEVECNTMRNVCHYNLVKIISSCSNVDFKCLIMEFMPKGSLEK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2047 466 FunFam Leucine-rich repeat receptor-like protein kinase TDR 73 347 - -
Prci6g2047 466 ProSiteProfiles Protein kinase domain profile. 383 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2047 466 SMART LRR_typ_2 179 202 IPR003591 -
Prci6g2047 466 SMART LRR_typ_2 275 299 IPR003591 -
Prci6g2047 466 SMART LRR_typ_2 155 178 IPR003591 -
Prci6g2047 466 SMART LRR_typ_2 227 250 IPR003591 -
Prci6g2047 466 SMART LRR_typ_2 11 35 IPR003591 -
Prci6g2047 466 SMART LRR_typ_2 83 107 IPR003591 -
Prci6g2047 466 SUPERFAMILY Protein kinase-like (PK-like) 360 465 IPR011009 -
Prci6g2047 466 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Prci6g2047 466 Pfam Leucine rich repeat 230 288 IPR001611 GO:0005515
Prci6g2047 466 Pfam Leucine rich repeat 108 168 IPR001611 GO:0005515
Prci6g2047 466 ProSiteProfiles Leucine-rich repeat profile. 181 202 IPR001611 GO:0005515
Prci6g2047 466 Gene3D Phosphorylase Kinase; domain 1 366 458 - -
Prci6g2047 466 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 72 - -
Prci6g2047 466 FunFam Serine-threonine protein kinase plant-type 365 458 - -
Prci6g2047 466 ProSiteProfiles Leucine-rich repeat profile. 277 300 IPR001611 GO:0005515
Prci6g2047 466 Gene3D Ribonuclease Inhibitor 76 347 IPR032675 -
Prci6g2047 466 Gene3D Ribonuclease Inhibitor 2 75 IPR032675 -
Prci6g2047 466 PANTHER OS04G0122200 PROTEIN 2 103 - -
Prci6g2047 466 SUPERFAMILY L domain-like 8 326 - -
Prci6g2047 466 Pfam Protein tyrosine and serine/threonine kinase 387 465 IPR001245 GO:0004672|GO:0006468
Prci6g2047 466 PRINTS Leucine-rich repeat signature 275 288 - -
Prci6g2047 466 PRINTS Leucine-rich repeat signature 230 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2047 Prci-Chr6 22230907 22239203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2047 2 465 Receptor kinase-like Gene Family AT3G47570 35.000 9.86e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2047 PK_Tyr_Ser-Thr 7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2047 - K13420 pcin:129313998 904.049