Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2046 ATGGAAGTAGGCAATCTTCATAAGCTTGAGGAATTAGACTTGTCACATAACAAGTTGAACGGCTTTATTCCAACTACTCTAGGTGGCCTGAATAATTTGCAAGATCTATCCCTAGCACATAACAATTTGCAAGGAAATATTCCTGAATCATTCGGAAATATGTTGAGCTTAGTAAAATTGAACCTTTCTGAGAATAATTTGTCTGGGAAGATTCCTAAATCTCTTGAGTTACTTATTGTTCTTAAGTATGTCAATCTCTCTTATAACAAACTCCAAGGAGAGATTTCAAGTGGAGGAGTTTTTAAAAATTTGACTCCTAAATCTTTTATGATGAATCAAGCTCTTTGTGGCAAGCCACAATTTGAAGTGCCTCCTTGCAAAAGAGAAACAAGAAAAAGATCAATGACAATATTGCTTTTATTAAAATGCATATTACCCATAGTTGTGTCAATAATTTTGATTGTCTCAGGCATTATCCTTTTAAGGCATAAACGACAACAAAATTCAAGGGGTCTAGTTAAAAGGGATTTATCAATTTTAGGAGTGCCCAAAAGGATTTCTTATTTTGAAATCCAAGAAGCAACCAATGGATTTGATGAGAGTAACATACTTGGAAGGGGTAGTTATGGTTCTGTGTTTAAAGGAAAACTTTCTAGTGCATTGATCGTTGCAGTTAAGATCTTTAAATTTGATTCACATGTAATGTTAAGGAGCTTTGAAAAAGAATGTGACATATTGTGTAATGCACACCATCACAATTTGGTGAAGGTTATAAGCTGTTGTTCCAATGTTGATTTTAAATCTCTGGTGACGGAATTCATGCCCAATGGGAGCCTTAAAAAATGGTTATATTCTCACAACTATTTTTTAGGTTTTCTTCAAAGGTTGAACATAATGATAAATGTAGCAACTGCTTTGGAATATCTCCATCATGACTTGTTAACACCAATTGTTCATTGTGATTTGAAGCCGAGCAACATTTTATTGGATGATGAACTGGTTGCTCATGTTAGTGACTTTGGAATTTCTGAACTTTTAGATAAAGAGGAATCTAAGACAAACACAGAGACAATACCTACTATTGATTATGTGGCACCTGAGTATGGATCTTTTGGAGTTGTTTCAACAAAAGTAGATGTGTATAGTTGTGGAATTATGCTATTAGAGGTGTTTACAAGAAAAAGGCCCACGGAAGATATGTTTGTTGAAGGATTGAACTTGAAGAGCTGGGTAAGTGAGTCAATGCCACATGCAATAATTCAAGTCATGGATTCCAATTTATTAGAAGGAGATCAACATCATATAAAAAATATATTGACATCTACAACTTTTGTTCTTGAATTGGCCTTGAATTGTTGCACCAATCTTCCAGAAGCATGTGGCAATATGATTGATGTTGTAGTATCATTAAACAAGATGAAGGGCATGTTTTTGCGTAGACAAGCAGCATAA 1452 0.3437 MEVGNLHKLEELDLSHNKLNGFIPTTLGGLNNLQDLSLAHNNLQGNIPESFGNMLSLVKLNLSENNLSGKIPKSLELLIVLKYVNLSYNKLQGEISSGGVFKNLTPKSFMMNQALCGKPQFEVPPCKRETRKRSMTILLLLKCILPIVVSIILIVSGIILLRHKRQQNSRGLVKRDLSILGVPKRISYFEIQEATNGFDESNILGRGSYGSVFKGKLSSALIVAVKIFKFDSHVMLRSFEKECDILCNAHHHNLVKVISCCSNVDFKSLVTEFMPNGSLKKWLYSHNYFLGFLQRLNIMINVATALEYLHHDLLTPIVHCDLKPSNILLDDELVAHVSDFGISELLDKEESKTNTETIPTIDYVAPEYGSFGVVSTKVDVYSCGIMLLEVFTRKRPTEDMFVEGLNLKSWVSESMPHAIIQVMDSNLLEGDQHHIKNILTSTTFVLELALNCCTNLPEACGNMIDVVVSLNKMKGMFLRRQAA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2046 483 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 123 - -
Prci6g2046 483 PANTHER OS04G0122200 PROTEIN 2 474 - -
Prci6g2046 483 ProSiteProfiles Leucine-rich repeat profile. 56 78 IPR001611 GO:0005515
Prci6g2046 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 317 329 IPR008271 GO:0004672|GO:0006468
Prci6g2046 483 ProSitePatterns Protein kinases ATP-binding region signature. 204 226 IPR017441 GO:0005524
Prci6g2046 483 Gene3D Ribonuclease Inhibitor 1 135 IPR032675 -
Prci6g2046 483 ProSiteProfiles Protein kinase domain profile. 198 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2046 483 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 274 483 - -
Prci6g2046 483 SUPERFAMILY L domain-like 4 120 - -
Prci6g2046 483 PRINTS Leucine-rich repeat signature 9 22 - -
Prci6g2046 483 PRINTS Leucine-rich repeat signature 30 43 - -
Prci6g2046 483 Pfam Leucine rich repeat 5 43 IPR001611 GO:0005515
Prci6g2046 483 Gene3D Phosphorylase Kinase; domain 1 161 273 - -
Prci6g2046 483 Gene3D Transferase(Phosphotransferase) domain 1 274 480 - -
Prci6g2046 483 Pfam Protein kinase domain 199 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2046 483 SMART serkin_6 198 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2046 483 SUPERFAMILY Protein kinase-like (PK-like) 179 418 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2046 Prci-Chr6 22156212 22158989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2046 2 97 Receptor kinase-like Gene Family AT3G47570 45.833 9.17e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2046 Pkinase 7.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2046 - K13420 pcin:129313997 952.199