Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2045 ATGGTCTACTTACTTATTCATCAGCTTTGTGAGATCAAACCACTTGGCTATTTACATCTAAGCCAAAACAAATTTTCTGAAGCAATGCCACCTTGTTTAGGAAATCTTTCCTCTTTAAGGGAACTTCACTTGGGCTCTAATAAGTTGGCATTAGAGATACCATCTTCCTTTTGGAATGTGAAAGACATATTGCATGTGAACTTGTCTTCCAATCATCTTGTTGGGGGTCTTTCATCAATGGTTGAGAAATTAAAAGCTCTTATCATATTAGATTTGTCTAAAAATCATATTTCAGGAATCATTCCAACAACTATGGGTGGCTTGCAAAATTTGCAGATTCTCTCTTTAGCACACAATGAATTGCAAGGATCTATTCCTAGATCATTTGGGAATTTGCTAAGCCTAGAAAATTTAGATCTTTCCCCAAATAATTTGTCTGGGGAGATTTCTAAAAATTTGGAGTTCCTTAGTGCTCTTAAGTATGTCAATCTCTCCATTAACAAACTCCAAGGAGAGATTCCAAGTGGAGGAGTCTTCAAAAATTTGACTCCTAAATCTTTGATGAAAAATCAAATTCTTTGTGGCATGCCGCAACTCCAAGTTATAAGCTGTTGTTCCAATGTTGATTTCAAATCTTTGGTAATGAAGTTCATGCCCAATGGGAGCCTTGAAAAGTGGTTATATTCTCACAACTACTTTTTAGGTTTTCTTCAAAGGTTAAATATAATGATAAATGTAGCATCTGCTTTGGAGTATCTCTATCATGGCATGCTAGCACCAATTGTTCACTATGATTTGAAGCCAAGCAACATTTTATTGGATGATAAAATGATTGCTCATGTGAGTGACTTTGGAATTTCCAAACTTTTAGATAAAGGGGAATCTAAGACATACATAGAGACAATACCTACTATTGGCTATATCGCACCAAAGTATGGATCTTCTGGAGTTGTTTCAACAAAAGTAGATGCGTATAGCTATGGAATTATGCTATTAGAAGTCTTTACAAGAAAAAGGCCCACAGAAGATATATTTGTCTCAAGATTAAGCTTGAAGAGCTGGGTAAGTGAGTCAATGCCACATGCAATAATTCAAGTCATGGATTCAAATTTATCGCAAGGAGATGAGCATCATATAAATAATACTTTGACATCTGCATCTTCTATTCTTGATTTGGCCTTGAATTGTTGCATCAATCTTCCAAAAGCACAAAGCAATATGATTGATGTTGTAGTATCATTAAACAAGATCAAGGCTAGTTTTATGCATAGGCAACAAGTCATGTTTAAATAA 1293 0.3496 MVYLLIHQLCEIKPLGYLHLSQNKFSEAMPPCLGNLSSLRELHLGSNKLALEIPSSFWNVKDILHVNLSSNHLVGGLSSMVEKLKALIILDLSKNHISGIIPTTMGGLQNLQILSLAHNELQGSIPRSFGNLLSLENLDLSPNNLSGEISKNLEFLSALKYVNLSINKLQGEIPSGGVFKNLTPKSLMKNQILCGMPQLQVISCCSNVDFKSLVMKFMPNGSLEKWLYSHNYFLGFLQRLNIMINVASALEYLYHGMLAPIVHYDLKPSNILLDDKMIAHVSDFGISKLLDKGESKTYIETIPTIGYIAPKYGSSGVVSTKVDAYSYGIMLLEVFTRKRPTEDIFVSRLSLKSWVSESMPHAIIQVMDSNLSQGDEHHINNTLTSASSILDLALNCCINLPKAQSNMIDVVVSLNKIKASFMHRQQVMFK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2045 430 Gene3D Ribonuclease Inhibitor 4 212 IPR032675 -
Prci6g2045 430 PRINTS Leucine-rich repeat signature 108 121 - -
Prci6g2045 430 PRINTS Leucine-rich repeat signature 87 100 - -
Prci6g2045 430 SMART LRR_typ_2 84 107 IPR003591 -
Prci6g2045 430 SMART LRR_typ_2 36 59 IPR003591 -
Prci6g2045 430 SMART LRR_typ_2 108 131 IPR003591 -
Prci6g2045 430 SMART LRR_typ_2 156 181 IPR003591 -
Prci6g2045 430 ProSiteProfiles Protein kinase domain profile. 135 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2045 430 Pfam Protein kinase domain 200 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2045 430 FunFam Leucine-rich repeat receptor protein kinase EMS1 102 199 - -
Prci6g2045 430 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 6 101 - -
Prci6g2045 430 PANTHER OS04G0122200 PROTEIN 8 204 - -
Prci6g2045 430 ProSiteProfiles Leucine-rich repeat profile. 134 157 IPR001611 GO:0005515
Prci6g2045 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Prci6g2045 430 Gene3D Transferase(Phosphotransferase) domain 1 218 428 - -
Prci6g2045 430 SUPERFAMILY Protein kinase-like (PK-like) 200 420 IPR011009 -
Prci6g2045 430 SMART serkin_6 140 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2045 430 Pfam Leucine rich repeat 88 145 IPR001611 GO:0005515
Prci6g2045 430 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 218 427 - -
Prci6g2045 430 SUPERFAMILY L domain-like 8 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2045 Prci-Chr6 21965812 21968138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2045 199 427 Receptor kinase-like Gene Family AT3G47090 35.887 4.92e-46 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2045 Pkinase 1.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2045 - K13420 pcin:129313996 850.506