Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2035 ATGAACCTATCCAACATGGCAAATCTTTGTTTTCATTTCCCCTTGCTCATGTTCTCCCTACTTTGTCTCAAGGTTTGTTTCACTTTATGCCACACCGATCTTACTATGAATGATGAATTGGCACTACTTGCTTTCAAGTTTTCTGTCAAGGACCCTTACAATCACTTGGCTAATTGGTCCAACTCTTCTTCCATTTGCAATTGGGTTGGGGTTATGTGTGATGCTCACCATGTGAGAGTAATGGCCTTGAATCTTGGTGAGATGGGTCTCAAGGGAACTTTGCCCTCAAAAATTGGGAATTTGTCTTTCCTAGTTGAACTTGACCTTCATAGTAATAACCTTTATGGTGAGTTGCCAAAGGAGTTGACCCAATTACACAAGCTGCAAATTCTCAATTTGAGCTACAATGAATTCAATGGAGGAATCCCAACTTGGATTGGAAGCTTATTTATGCTTCAACACTTCCATCTCCATAATAATAGTTTTGGAGGTTTTATTCCTAAAAGCATATCCAACTTGTCAAAGTTAGAGACTTTGGATTGGAATTATAACTTTATTGAAGGAGTTATTCCATCTGAGATTGGAAAACTTCAAAGTTTGAAGATTTTACGGATTGCAAGAAACAAGCTTTCAGGAAGAATACCCCTAACTATTTCTAACTTATCCTCACTTGAGTTATTGTCTTTGTCTTTCAACTCCTTAACAGGAGATATTCCCAAAGCAATTGGTGCTCTCACAAACCTGAAAATACTATATCTAGGTGCTAACAAGTTGTCTGGCCAAATACCAAGGAATATTGGAAACTTGACAAAACTTCAACATCTACAACTGGGTGAAAATAACATAAAAGGTGATATACCAGAAGGTATTGGAAAACTGGATTTGCTTCAAGAGCTATATCTTTCTTTTAATAATTTACGAGGAGGTATTCCTGAGCAGATTGGTAATCTTAAAAGTCTGAAACTTCTATATTTAGGACGTAATCAGTTTTCTGGCCAAATATCATCTACTATCTTTAACATATCTGAGCTGCAAGAGATTGATTTAAGTTGGAATAATTTGTTGGGAGGCATTCCTTCAAATATATGTCATGGCCTTCCAAATTTACAAGCTTTGCATCTTCAAGCCAACAAATTATTTGGAGCTATACCATCTGGTTGGACACAATGCAAGCAGCTCAAAGAGTTAACATTAGAACTCAACTTATTCACAGGCCATATACCCAAAAGCATCAGGAATTTGACTATGCTTCAATTGCTAAATCTGTATTCCAATAACTTGGAAGGTTTAATACCTATGGAAATAGGCAATCTTCATAAGCTTGAATTCTTAGAATTGTCATCTAACAAGTTGAGCGGTTCTATACCATTGACCATTTTTAACATTTCAACTTTGAAATTCTTAAACCTTGAAAGCAATTTTATATCTGGCAATCTTCCATCAAAATTTGGGAATCTCACTAGTTTCTTTGAACTATCCTTGGGAGAAAACATATTGAGAGGATCAATTCCAAAAGCAATTGGTACCTTATTAGATCTTCAATATTTGAATCTTGAAGGCAATGAGCTACATGGCCTAATCATTGATGAGATTTGTTATATCACAAAGCTTGCCTATTTATCTTTAAGTAGAAACAAGTTTTCTGGAGGAATACCCCCTTGTTTAGCAAATGTTACCTCTTTACGAGACCTTTACTTAGACTCTAATAAGTTAATTTCAAAAATACCTCCTTCATTTTGGAATTTGAAGGATATATTGAGAGTAAACTTATCTTCCAATATTTTAGGTGGAAATGTATCATTGAAGATTGGAAACTTGAATGCTCTTGTGTTACTAGATTTGTCAAGAAATCATATTTCAGGCATTATTCCAGCAACTTTGGGTGGCTTGAAGAATTTGCAAGATCTTTCCCTAGCACATAACAATTTGCAAGGAAATATTCCTAAATCATTCGGAAATATGTTGAGCTTAATAAAATTGGACCTTTCTGATAATAATTTATCTGGGAAGATTCCTAAATCTTTGGAGTTACTTATTTATCTTAAGTATGTTAATCTCTCCTATAACAAACTCCAAGGAGAGATTCCAAGTAGAGGAGTTTTTAAAAATTTGACTCCTGAATCTTTTATGATGAATCAAGCTCTTTGTGGCAAGCCGCAACTCCAAGTGCCTCCCTGCAAAAAAGAAACAAGAAAAGGATCAATGACAATATTGCTTTTATTGAGATGCATATTACCCATAGTTGTATCAATAATTTTGGTTGTCTTAGGCATTATGCTTTTAAGACATAAACAACAACAAAATTCAAGGGGTCTAGTTGAAAGGGAACTATCAACTTTAGGAGTGCCGAGAAGAATTTCTTATTTTGAAATCCAAGAAGCAACCAATAGATTTGATGAGAGTAGCATACTTGGAAGGGGTAGTTATGGTTCTGTGTTTAAAGGAACGCTTTCCAATGGAATGATCGTTGCAGTTAAGATCTTCAATTGTGATTCACAAGTAATGTTAAGGAGCTTTGAAAAGGAATGTGACATATTATGTAATGCACGCCATCGCAATTTGGTGAAGGTTATAAGCTGTTGTTCGAATGTTGATTTCAAATCTTTGGTAATGGAGTTCATGCCCAATGGGAGTCTGGAAAGATGGTTATATTCTTACAACTATTTTTTAGATTTTCTTCAAAGGTTGAATATAATGATAAATGTTGCAACTGCTTTAGAATATCTCCATCATGGCTTGTTAACACCAATTGTTCATTGTGATTTAAAGCCAAGCAACATTTTATTGGATGATGAAATGGTTGCTCATGTGAGTGACTTTGGAATTTCTAAACTTTTAGATAAAGAGGAATCTAAGATATTCACAGAGACAATACCTACTATTGGCTATGTGGCACCTGAGTATGGATCTTCTGGAGTTGTTTCAACAAAAATAGATGTGTATAGCTATGGAATCATGCTATTAGAGGTGTTTACAAGAAAAAGGCCAACAGAAGATATGTTTGTGTCAGGATTGAGGTTAAAGAGTTGGGTAAGTGAGTCAATGCCTCATGCAATAATTCAAGTCATGGATTCCAATTTATTGCAAGGAGATGAACATCATATAAATAATATATTGACATCTACATCCTCTATTCTTGAATTGGCCTTGAATTGTTGCACTGATCTTCCAAAAGCACGTGGCAATATGATTGATGTTGTAGTATCATTGAACAAGATCAAAGGGATGTTTTTGCATAGGCAACAGCATCACGTTTAG 3258 0.3499 MNLSNMANLCFHFPLLMFSLLCLKVCFTLCHTDLTMNDELALLAFKFSVKDPYNHLANWSNSSSICNWVGVMCDAHHVRVMALNLGEMGLKGTLPSKIGNLSFLVELDLHSNNLYGELPKELTQLHKLQILNLSYNEFNGGIPTWIGSLFMLQHFHLHNNSFGGFIPKSISNLSKLETLDWNYNFIEGVIPSEIGKLQSLKILRIARNKLSGRIPLTISNLSSLELLSLSFNSLTGDIPKAIGALTNLKILYLGANKLSGQIPRNIGNLTKLQHLQLGENNIKGDIPEGIGKLDLLQELYLSFNNLRGGIPEQIGNLKSLKLLYLGRNQFSGQISSTIFNISELQEIDLSWNNLLGGIPSNICHGLPNLQALHLQANKLFGAIPSGWTQCKQLKELTLELNLFTGHIPKSIRNLTMLQLLNLYSNNLEGLIPMEIGNLHKLEFLELSSNKLSGSIPLTIFNISTLKFLNLESNFISGNLPSKFGNLTSFFELSLGENILRGSIPKAIGTLLDLQYLNLEGNELHGLIIDEICYITKLAYLSLSRNKFSGGIPPCLANVTSLRDLYLDSNKLISKIPPSFWNLKDILRVNLSSNILGGNVSLKIGNLNALVLLDLSRNHISGIIPATLGGLKNLQDLSLAHNNLQGNIPKSFGNMLSLIKLDLSDNNLSGKIPKSLELLIYLKYVNLSYNKLQGEIPSRGVFKNLTPESFMMNQALCGKPQLQVPPCKKETRKGSMTILLLLRCILPIVVSIILVVLGIMLLRHKQQQNSRGLVERELSTLGVPRRISYFEIQEATNRFDESSILGRGSYGSVFKGTLSNGMIVAVKIFNCDSQVMLRSFEKECDILCNARHRNLVKVISCCSNVDFKSLVMEFMPNGSLERWLYSYNYFLDFLQRLNIMINVATALEYLHHGLLTPIVHCDLKPSNILLDDEMVAHVSDFGISKLLDKEESKIFTETIPTIGYVAPEYGSSGVVSTKIDVYSYGIMLLEVFTRKRPTEDMFVSGLRLKSWVSESMPHAIIQVMDSNLLQGDEHHINNILTSTSSILELALNCCTDLPKARGNMIDVVVSLNKIKGMFLHRQQHHV 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2035 1085 ProSitePatterns Serine/Threonine protein kinases active-site signature. 917 929 IPR008271 GO:0004672|GO:0006468
Prci6g2035 1085 Pfam Leucine Rich Repeat 656 676 IPR001611 GO:0005515
Prci6g2035 1085 Pfam Leucine Rich Repeat 344 364 IPR001611 GO:0005515
Prci6g2035 1085 Pfam Leucine Rich Repeat 560 582 IPR001611 GO:0005515
Prci6g2035 1085 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 456 730 - -
Prci6g2035 1085 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 35 173 - -
Prci6g2035 1085 SUPERFAMILY L domain-like 403 721 - -
Prci6g2035 1085 Pfam Protein kinase domain 799 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2035 1085 Gene3D Phosphorylase Kinase; domain 1 759 873 - -
Prci6g2035 1085 Gene3D Ribonuclease Inhibitor 459 734 IPR032675 -
Prci6g2035 1085 Gene3D Ribonuclease Inhibitor 292 458 IPR032675 -
Prci6g2035 1085 SUPERFAMILY Protein kinase-like (PK-like) 779 1074 IPR011009 -
Prci6g2035 1085 SMART LRR_sd22_2 438 464 - -
Prci6g2035 1085 SMART LRR_sd22_2 630 656 - -
Prci6g2035 1085 SMART LRR_sd22_2 197 223 - -
Prci6g2035 1085 SMART LRR_sd22_2 293 319 - -
Prci6g2035 1085 SMART LRR_sd22_2 245 271 - -
Prci6g2035 1085 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 513 1071 - -
Prci6g2035 1085 Gene3D Transferase(Phosphotransferase) domain 1 874 1083 - -
Prci6g2035 1085 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 270 337 - -
Prci6g2035 1085 FunFam Uncharacterized protein 174 258 - -
Prci6g2035 1085 ProSiteProfiles Leucine-rich repeat profile. 656 678 IPR001611 GO:0005515
Prci6g2035 1085 FunFam Calmodulin-binding receptor kinase CaMRLK 342 455 - -
Prci6g2035 1085 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Prci6g2035 1085 SUPERFAMILY RNI-like 83 428 - -
Prci6g2035 1085 SMART serkin_6 798 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2035 1085 Gene3D Ribonuclease Inhibitor 189 289 IPR032675 -
Prci6g2035 1085 Gene3D Ribonuclease Inhibitor 35 188 IPR032675 -
Prci6g2035 1085 SMART LRR_typ_2 654 678 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 149 173 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 245 268 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 293 317 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 630 653 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 341 365 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 366 390 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 101 125 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 558 581 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 414 437 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 269 292 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 606 629 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 221 244 IPR003591 -
Prci6g2035 1085 SMART LRR_typ_2 438 462 IPR003591 -
Prci6g2035 1085 Pfam Leucine rich repeat 392 451 IPR001611 GO:0005515
Prci6g2035 1085 Pfam Leucine rich repeat 605 643 IPR001611 GO:0005515
Prci6g2035 1085 Pfam Leucine rich repeat 246 306 IPR001611 GO:0005515
Prci6g2035 1085 ProSiteProfiles Protein kinase domain profile. 798 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2035 1085 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 874 1083 - -
Prci6g2035 1085 ProSitePatterns Protein kinases ATP-binding region signature. 804 826 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2035 Prci-Chr6 21501022 21520503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2035 41 1075 Receptor kinase-like Gene Family AT5G46330 34.660 1.27e-175 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2035 Pkinase 7.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2035 - K13420 qsa:O6P43_031956 1056.97