Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci6g2034 ATGAACCTATCCAACATGGCAAATCTTTGTTTTCATTTCCCCTTGCTCATGTTCTCCCTACTTTGTCTCAAGGTTTGTTTCACTTTATGCCACACCGATCTTACTATGAATGATGAATTGGCACTACTTGCTTTCAAGTTTTCTGTCAAGGACCCTTACAATCACTTGGCTAATTGGTCCAACTCTTCTTCCATTTGCAATTGGGTTGGGGTTATGTGTGATGCTCACCATGTGAGAGTAATGGCCTTGAATCTTGGTGAGATGGGTCTCAAGGGAACTTTGCCCTCAAAAATTGGGAATTTGTCTTTCCTAGTTGAACTTGACCTTCATAGTAATAACCTTTATGGTGAGTTGCCAAAGGAGTTGACCCAATTACACAAGCTGCAAATTCTCAATTTGAGCTACAATGAATTCAATGGAGGAATCCCAACTTGGATTGGAAGCTTATTTATGCTTCAACACTTCCATCTCCATAATAATAGTTTTGGAGGTTTTATTCCTAAAAGCATATCCAACTTGTCAAAGTTAGAGACTTTGGATTGGAATTATAACTTTATTGAAGGAGTTATTCCATCTGAGATTGGAAAACTTCAAAGTTTGAAGATTTTACGGATTGCAAGAAACAAGCTTTCAGGAAGAATACCCCTAACTATTTCTAACTTATCCTCACTTGAGTTATTGTCTTTGTCTTTCAACTCCTTAACAGGAGATATTCCCAAAGCAATTGGTGCTCTCACAAACCTGAAAATACTATATCTAGGTGCTAACAAGTTGTCTGGCCAAATACCAAGGAATATTGGAAACTTGACAAAACTTCAACATCTACAACTGGGTGAAAATAACATAAAAGGTGATATACCAGAAGGTATTGGAAAACTGGATTTGCTTCAAGAGCTATATCTTTCTTTTAATAATTTACGAGGAGGTATTCCTGAGCAGATTGGTAATCTTAAAAGTCTGAAACTTCTATATTTAGGACGTAATCAGTTTTCTGGCCAAATATCATCTACTATCTTTAACATATCTGAGCTGCAAGAGATTGATTTAAGTTGGAATAATTTGTTGGGAGGCATTCCTTCAAATATATGTCATGGCCTTCCAAATTTACAAGCTTTGCATCTTCAAGCCAACAAATTATTTGGAGCTATACCATCTGGTTGGACACAATGCAAGCAGCTCAAAGAGTTAACATTAGAACTCAACTTATTCACAGGCCATATACCCAAAAGCATCAGGAATTTGACTATGCTTCAATTGCTAAATCTGTATTCCAATAACTTGGAAGGTGGAAATGTATCATTGAAGATTGGAAACTTGAATGCTCTTGTGTTACTAGATTTGTCAAGAAATCATATTTCAGGCATTATTCCAGCAACTTTGGGTGGCTTGAAGAATTTGCAAGATCTTTCCCTAGCACATAACAATTTGCAAGGAAATATTCCTAAATCATTCGGAAATATGTTGAGCTTAATAAAATTGGACCTTTCTGATAATAATTTATCTGGGAAGATTCCTAAATCTTTGGAGTTACTTATTTATCTTAAGTATGTTAATCTCTCCTATAACAAACTCCAAGGAGAGATTCCAAGTAGAGGAGTTTTTAAAAATTTGACTCCTGAATCTTTTATGATGAATCAAGCTCTTTGTGGCAAGCCGCAACTCCAAGTGCCTCCCTGCAAAAAAGAAACAAGAAAAGGATCAATGACAATATTGCTTTTATTGAGATGCATATTACCCATAGTTGTATCAATAATTTTGGTTGTCTTAGGCATTATGCTTTTAAGACATAAACAACAACAAAATTCAAGGGGTCTAGTTGAAAGGGAACTATCAACTTTAGGAGTGCCGAGAAGAATTTCTTATTTTGAAATCCAAGAAGCAACCAATAGATTTGATGAGAGTAGCATACTTGGAAGGGGTAGTTATGGTTCTGTGTTTAAAGGAACGCTTTCCAATGGAATGATCGTTGCAGTTAAGATCTTCAATTGTGATTCACAAGTAATGTTAAGGAGCTTTGAAAAGGAATGTGACATATTATGTAATGCACGCCATCGCAATTTGGTGAAGGTTATAAGCTGTTGTTCGAATGTTGATTTCAAATCTTTGGTAATGGAGTTCATGCCCAATGGGAGTCTGGAAAGATGGTTATATTCTTACAACTATTTTTTAGATTTTCTTCAAAGGTTGAATATAATGATAAATGTTGCAACTGCTTTAGAATATCTCCATCATGGCTTGTTAACACCAATTGTTCATTGTGATTTAAAGCCAAGCAACATTTTATTGGATGATGAAATGGTTGCTCATGTGAGTGACTTTGGAATTTCTAAACTTTTAGATAAAGAGGAATCTAAGATATTCACAGAGACAATACCTACTATTGGCTATGTGGCACCTGAGTATGGATCTTCTGGAGTTGTTTCAACAAAAATAGATGTGTATAGCTATGGAATCATGCTATTAGAGGTGTTTACAAGAAAAAGGCCAACAGAAGATATGTTTGTGTCAGGATTGAGGTTAAAGAGTTGGGTAAGTGAGTCAATGCCTCATGCAATAATTCAAGTCATGGATTCCAATTTATTGCAAGGAGATGAACATCATATAAATAATATATTGACATCTACATCCTCTATTCTTGAATTGGCCTTGAATTGTTGCACTGATCTTCCAAAAGCACGTGGCAATATGATTGATGTTGTAGTATCATTGAACAAGATCAAAGGGATGTTTTTGCATAGGCAACAGCATCACGTTTAG 2757 0.3558 MNLSNMANLCFHFPLLMFSLLCLKVCFTLCHTDLTMNDELALLAFKFSVKDPYNHLANWSNSSSICNWVGVMCDAHHVRVMALNLGEMGLKGTLPSKIGNLSFLVELDLHSNNLYGELPKELTQLHKLQILNLSYNEFNGGIPTWIGSLFMLQHFHLHNNSFGGFIPKSISNLSKLETLDWNYNFIEGVIPSEIGKLQSLKILRIARNKLSGRIPLTISNLSSLELLSLSFNSLTGDIPKAIGALTNLKILYLGANKLSGQIPRNIGNLTKLQHLQLGENNIKGDIPEGIGKLDLLQELYLSFNNLRGGIPEQIGNLKSLKLLYLGRNQFSGQISSTIFNISELQEIDLSWNNLLGGIPSNICHGLPNLQALHLQANKLFGAIPSGWTQCKQLKELTLELNLFTGHIPKSIRNLTMLQLLNLYSNNLEGGNVSLKIGNLNALVLLDLSRNHISGIIPATLGGLKNLQDLSLAHNNLQGNIPKSFGNMLSLIKLDLSDNNLSGKIPKSLELLIYLKYVNLSYNKLQGEIPSRGVFKNLTPESFMMNQALCGKPQLQVPPCKKETRKGSMTILLLLRCILPIVVSIILVVLGIMLLRHKQQQNSRGLVERELSTLGVPRRISYFEIQEATNRFDESSILGRGSYGSVFKGTLSNGMIVAVKIFNCDSQVMLRSFEKECDILCNARHRNLVKVISCCSNVDFKSLVMEFMPNGSLERWLYSYNYFLDFLQRLNIMINVATALEYLHHGLLTPIVHCDLKPSNILLDDEMVAHVSDFGISKLLDKEESKIFTETIPTIGYVAPEYGSSGVVSTKIDVYSYGIMLLEVFTRKRPTEDMFVSGLRLKSWVSESMPHAIIQVMDSNLLQGDEHHINNILTSTSSILELALNCCTDLPKARGNMIDVVVSLNKIKGMFLHRQQHHV 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci6g2034 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Prci6g2034 918 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
Prci6g2034 918 SMART serkin_6 631 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2034 918 FunFam Serine-threonine protein kinase plant-type 612 706 - -
Prci6g2034 918 SUPERFAMILY RNI-like 83 428 - -
Prci6g2034 918 SUPERFAMILY Protein kinase-like (PK-like) 612 907 IPR011009 -
Prci6g2034 918 SUPERFAMILY Outer arm dynein light chain 1 367 553 - -
Prci6g2034 918 Pfam Leucine rich repeat 246 306 IPR001611 GO:0005515
Prci6g2034 918 Pfam Leucine rich repeat 465 524 IPR001611 GO:0005515
Prci6g2034 918 Pfam Leucine rich repeat 367 427 IPR001611 GO:0005515
Prci6g2034 918 Gene3D Ribonuclease Inhibitor 293 360 IPR032675 -
Prci6g2034 918 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 306 563 - -
Prci6g2034 918 SMART LRR_typ_2 439 462 IPR003591 -
Prci6g2034 918 SMART LRR_typ_2 269 292 IPR003591 -
Prci6g2034 918 SMART LRR_typ_2 149 173 IPR003591 -
Prci6g2034 918 SMART LRR_typ_2 245 268 IPR003591 -
Prci6g2034 918 SMART LRR_typ_2 221 244 IPR003591 -
Prci6g2034 918 SMART LRR_typ_2 293 317 IPR003591 -
Prci6g2034 918 SMART LRR_typ_2 463 486 IPR003591 -
Prci6g2034 918 SMART LRR_typ_2 341 365 IPR003591 -
Prci6g2034 918 SMART LRR_typ_2 101 125 IPR003591 -
Prci6g2034 918 SMART LRR_typ_2 366 390 IPR003591 -
Prci6g2034 918 SMART LRR_typ_2 487 511 IPR003591 -
Prci6g2034 918 ProSiteProfiles Protein kinase domain profile. 631 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2034 918 ProSiteProfiles Leucine-rich repeat profile. 489 511 IPR001611 GO:0005515
Prci6g2034 918 Gene3D Ribonuclease Inhibitor 361 431 IPR032675 -
Prci6g2034 918 SMART LRR_sd22_2 463 489 - -
Prci6g2034 918 SMART LRR_sd22_2 197 223 - -
Prci6g2034 918 SMART LRR_sd22_2 293 319 - -
Prci6g2034 918 SMART LRR_sd22_2 245 271 - -
Prci6g2034 918 Pfam Leucine Rich Repeat 344 364 IPR001611 GO:0005515
Prci6g2034 918 Gene3D Ribonuclease Inhibitor 37 150 IPR032675 -
Prci6g2034 918 Gene3D Ribonuclease Inhibitor 432 558 IPR032675 -
Prci6g2034 918 Gene3D Ribonuclease Inhibitor 151 292 IPR032675 -
Prci6g2034 918 Pfam Protein kinase domain 632 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci6g2034 918 Gene3D Phosphorylase Kinase; domain 1 592 706 - -
Prci6g2034 918 Pfam Leucine rich repeat N-terminal domain 37 74 IPR013210 -
Prci6g2034 918 Gene3D Transferase(Phosphotransferase) domain 1 707 916 - -
Prci6g2034 918 FunFam MDIS1-interacting receptor like kinase 2 isoform A 192 289 - -
Prci6g2034 918 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 35 191 - -
Prci6g2034 918 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 707 916 - -
Prci6g2034 918 PANTHER OS04G0122200 PROTEIN 299 908 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci6g2034 Prci-Chr6 21501022 21520503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci6g2034 32 915 Receptor kinase-like Gene Family AT3G47570 35.105 4.08e-170 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci6g2034 Pkinase 5.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci6g2034 - K13420 pcin:129314030 1124.38